FFCP PHASE1:Hg19::chr6:2900763..2900776,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5272 | |EntrezGene=5272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8955 | |HGNC=8955 | ||
|TSSclassifier=strong | |||
|UniProt=P50453 | |UniProt=P50453 | ||
|association_with_transcript=68bp_to_BT006673,CR407627_5end | |association_with_transcript=68bp_to_BT006673,CR407627_5end | ||
|cluster_id=chr6:2900763..2900776,- | |||
|coexpression_cluster_id=C46 | |coexpression_cluster_id=C46 | ||
|description=CAGE_peak_4_at_SERPINB9_5end | |description=CAGE_peak_4_at_SERPINB9_5end | ||
|id=chr6:2900763..2900776,- | |id=chr6:2900763..2900776,- | ||
|ontology_enrichment_celltype=CL:0002057!1.30e-45!42;CL:0000860!6.66e-42!45;CL:0000738!6.65e-30!140;CL:0000557!8.45e-30!71;CL:0002031!2.73e-29!124;CL:0002009!3.10e-29!65;CL:0000766!4.18e-29!76;CL:0002194!1.75e-28!63;CL:0000576!1.75e-28!63;CL:0000040!1.75e-28!63;CL:0000559!1.75e-28!63;CL:0000839!1.76e-28!70;CL:0002087!6.72e-28!119;CL:0000988!3.60e-26!182;CL:0002032!1.83e-25!165;CL:0000837!1.83e-25!165;CL:0000037!8.12e-24!172;CL:0000566!8.12e-24!172;CL:0000763!2.92e-21!112;CL:0000049!2.92e-21!112;CL:0000623!1.25e-07!3;CL:0000825!1.25e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.30e-45!42;CL:0000860!6.66e-42!45;CL:0000738!6.65e-30!140;CL:0000557!8.45e-30!71;CL:0002031!2.73e-29!124;CL:0002009!3.10e-29!65;CL:0000766!4.18e-29!76;CL:0002194!1.75e-28!63;CL:0000576!1.75e-28!63;CL:0000040!1.75e-28!63;CL:0000559!1.75e-28!63;CL:0000839!1.76e-28!70;CL:0002087!6.72e-28!119;CL:0000988!3.60e-26!182;CL:0002032!1.83e-25!165;CL:0000837!1.83e-25!165;CL:0000037!8.12e-24!172;CL:0000566!8.12e-24!172;CL:0000763!2.92e-21!112;CL:0000049!2.92e-21!112;CL:0000623!1.25e-07!3;CL:0000825!1.25e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.22e-49;33!CL:0002057;8.22e-49;33!CL:0000473;1.95e-34;39!CL:0000234;1.95e-34;39!CL:0000576;1.63e-18;48!CL:0000766;1.71e-14;69!CL:0000763;4.19e-12;100!CL:0002087;4.85e-10;104!CL:0000771;1.12e-07;2!CL:0000738;5.30e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.60e-41,42;CL:0002057,7.60e-41,42;CL:0000473,1.40e-35,48;CL:0000234,1.40e-35,48;CL:0000766,1.16e-31,72;CL:0000839,1.11e-29,66;CL:0000557,3.19e-29,67;CL:0002194,3.37e-28,59;CL:0000576,3.37e-28,59;CL:0000040,3.37e-28,59;CL:0000559,3.37e-28,59;CL:0002009,3.03e-27,61;CL:0000738,1.69e-21,136;CL:0002031,2.27e-21,120;CL:0000763,1.09e-20,108;CL:0000049,1.09e-20,108;CL:0002087,2.87e-19,115;CL:0002032,6.43e-18,161;CL:0000837,6.43e-18,161;CL:0000037,4.19e-17,168;CL:0000988,3.76e-16,177;CL:0000771,1.12e-07,2;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;9.04e-30;42!CL:0000049;6.41e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.90e-27!102;UBERON:0003061!1.90e-27!102;UBERON:0002371!2.70e-25!80;UBERON:0002193!2.91e-25!112;UBERON:0001474!8.02e-23!86;UBERON:0002405!4.27e-19!115;UBERON:0004765!6.03e-18!101;UBERON:0001434!6.03e-18!101;UBERON:0003081!3.58e-12!216;UBERON:0002204!3.04e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!1.90e-27!102;UBERON:0003061!1.90e-27!102;UBERON:0002371!2.70e-25!80;UBERON:0002193!2.91e-25!112;UBERON:0001474!8.02e-23!86;UBERON:0002405!4.27e-19!115;UBERON:0004765!6.03e-18!101;UBERON:0001434!6.03e-18!101;UBERON:0003081!3.58e-12!216;UBERON:0002204!3.04e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.23e-25,76;UBERON:0001474,1.13e-23,82;UBERON:0004765,1.84e-21,90;UBERON:0002405,9.98e-21,93;UBERON:0002390,1.33e-19,98;UBERON:0003061,1.33e-19,98;UBERON:0001434,3.49e-19,100;UBERON:0002193,1.16e-17,108;UBERON:0002204,6.92e-11,167;UBERON:0003081,1.16e-08,203;UBERON:0002384,9.92e-07,371 | |||
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| ||
|short_description=p4@SERPINB9 | |short_description=p4@SERPINB9 | ||
}} | }} |
Latest revision as of 13:41, 17 September 2015
Short description: | p4@SERPINB9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SERPINB9_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | 68bp_to_BT006673, CR407627_5end |
EntrezGene: | SERPINB9 |
HGNC: | 8955 |
UniProt: | P50453 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.60e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.60e-41 | 42 |
defensive cell | 1.40e-35 | 48 |
phagocyte | 1.40e-35 | 48 |
myeloid leukocyte | 1.16e-31 | 72 |
myeloid lineage restricted progenitor cell | 1.11e-29 | 66 |
granulocyte monocyte progenitor cell | 3.19e-29 | 67 |
monopoietic cell | 3.37e-28 | 59 |
monocyte | 3.37e-28 | 59 |
monoblast | 3.37e-28 | 59 |
promonocyte | 3.37e-28 | 59 |
macrophage dendritic cell progenitor | 3.03e-27 | 61 |
leukocyte | 1.69e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 2.27e-21 | 120 |
myeloid cell | 1.09e-20 | 108 |
common myeloid progenitor | 1.09e-20 | 108 |
nongranular leukocyte | 2.87e-19 | 115 |
hematopoietic oligopotent progenitor cell | 6.43e-18 | 161 |
hematopoietic multipotent progenitor cell | 6.43e-18 | 161 |
hematopoietic stem cell | 4.19e-17 | 168 |
hematopoietic cell | 3.76e-16 | 177 |
eosinophil | 1.12e-07 | 2 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.23e-25 | 76 |
bone element | 1.13e-23 | 82 |
skeletal element | 1.84e-21 | 90 |
immune system | 9.98e-21 | 93 |
hematopoietic system | 1.33e-19 | 98 |
blood island | 1.33e-19 | 98 |
skeletal system | 3.49e-19 | 100 |
hemolymphoid system | 1.16e-17 | 108 |
musculoskeletal system | 6.92e-11 | 167 |
lateral plate mesoderm | 1.16e-08 | 203 |
connective tissue | 9.92e-07 | 371 |