FFCP PHASE1:Hg19::chr11:31827535..31827565,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000533156_5end | |association_with_transcript=0bp_to_ENST00000533156_5end | ||
|cluster_id=chr11:31827535..31827565,- | |||
|coexpression_cluster_id=C3140 | |||
|description=CAGE_peak_11_at_PAX6_5end | |description=CAGE_peak_11_at_PAX6_5end | ||
|id=chr11:31827535..31827565,- | |id=chr11:31827535..31827565,- | ||
|ontology_enrichment_celltype=CL:0000306!1.13e-13!4;CL:0002222!1.13e-13!4;CL:0002224!1.13e-13!4;CL:0000128!1.57e-11!7;CL:0000126!1.57e-11!7;CL:0000127!1.57e-11!7;CL:0002453!1.57e-11!7;CL:0000064!5.11e-11!3;CL:0005012!5.11e-11!3;CL:0000067!5.11e-11!3;CL:0002304!5.11e-11!3;CL:0002605!6.83e-11!3;CL:0000075!4.27e-08!27 | |ontology_enrichment_celltype=CL:0000306!1.13e-13!4;CL:0002222!1.13e-13!4;CL:0002224!1.13e-13!4;CL:0000128!1.57e-11!7;CL:0000126!1.57e-11!7;CL:0000127!1.57e-11!7;CL:0002453!1.57e-11!7;CL:0000064!5.11e-11!3;CL:0005012!5.11e-11!3;CL:0000067!5.11e-11!3;CL:0002304!5.11e-11!3;CL:0002605!6.83e-11!3;CL:0000075!4.27e-08!27 | ||
|ontology_enrichment_celltype_v019=CL:0000306;5.02e-44;4!CL:0002222;5.02e-44;4!CL:0002224;5.02e-44;4!CL:0000064;1.17e-34;3!CL:0000067;1.17e-34;3!CL:0005012;1.17e-34;3!CL:0002304;1.17e-34;3!CL:0002605;4.82e-34;3!CL:0000047;1.66e-22;2!CL:0000075;1.37e-19;27!CL:0000128;5.55e-15;7!CL:0000126;5.55e-15;7!CL:0000127;5.55e-15;7!CL:0002319;2.80e-14;25!CL:0000342;1.32e-12;1!CL:0002565;1.32e-12;1!CL:0002535;5.11e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,6.27e-44,4;CL:0002222,6.27e-44,4;CL:0002224,6.27e-44,4;CL:0000064,1.39e-34,3;CL:0000067,1.39e-34,3;CL:0005012,1.39e-34,3;CL:0002304,1.39e-34,3;CL:0002605,3.85e-34,3;CL:0000075,1.51e-19,27;CL:0000128,5.04e-15,7;CL:0000126,5.04e-15,7;CL:0000127,5.04e-15,7;CL:0002453,5.04e-15,7;CL:0002319,2.61e-14,25;CL:0000133,1.24e-13,59;CL:0000047,9.33e-13,8;CL:0000342,1.25e-12,1;CL:0002565,1.25e-12,1;CL:0000221,4.83e-11,72;CL:0002535,5.11e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000133;3.58e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007625;1.16e-63;11!UBERON:0001801;6.94e-50;14!UBERON:0000019;3.22e-46;19!UBERON:0000047;3.22e-46;19!UBERON:0004088;3.22e-46;19!UBERON:0010230;3.22e-46;19!UBERON:0000488;1.92e-45;4!UBERON:0010077;5.02e-44;4!UBERON:0005389;5.02e-44;4!UBERON:0000484;5.02e-44;4!UBERON:0000965;5.02e-44;4!UBERON:0001803;5.02e-44;4!UBERON:0000970;7.32e-44;20!UBERON:0002104;9.93e-42;21!UBERON:0001456;9.93e-42;21!UBERON:0000020;5.08e-38;23!UBERON:0001032;2.14e-36;24!UBERON:0004456;2.14e-36;24!UBERON:0001778;1.17e-34;3!UBERON:0001775;1.17e-34;3!UBERON:0002203;1.93e-30;6!UBERON:0001768;1.93e-30;6!UBERON:0002200;1.93e-30;6!UBERON:0010371;7.95e-22;31!UBERON:0006876;9.30e-17;11!UBERON:0001444;7.59e-13;48!UBERON:0002506;1.32e-12;1!UBERON:0001769;1.32e-12;1!UBERON:0000033;1.38e-09;50!UBERON:0000153;3.95e-09;54!UBERON:0007811;2.73e-08;52!UBERON:0006955;5.11e-07;2!UBERON:0004801;5.11e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.48e-63,11;UBERON:0001801,8.41e-50,14;UBERON:0000488,2.16e-45,4;UBERON:0010077,6.27e-44,4;UBERON:0005389,6.27e-44,4;UBERON:0000484,6.27e-44,4;UBERON:0002546,6.27e-44,4;UBERON:0000965,6.27e-44,4;UBERON:0001803,6.27e-44,4;UBERON:0003073,6.27e-44,4;UBERON:0005426,6.27e-44,4;UBERON:0000019,8.95e-44,20;UBERON:0000047,8.95e-44,20;UBERON:0010312,8.95e-44,20;UBERON:0004088,8.95e-44,20;UBERON:0010230,8.95e-44,20;UBERON:0003072,8.95e-44,20;UBERON:0004128,8.95e-44,20;UBERON:0003071,8.95e-44,20;UBERON:0000970,1.20e-41,21;UBERON:0002104,1.20e-41,21;UBERON:0001456,1.04e-39,22;UBERON:0000020,2.52e-36,24;UBERON:0001032,2.52e-36,24;UBERON:0004456,2.52e-36,24;UBERON:0001778,1.39e-34,3;UBERON:0001775,1.39e-34,3;UBERON:0002203,2.08e-30,6;UBERON:0001768,2.08e-30,6;UBERON:0002200,2.08e-30,6;UBERON:0005085,6.66e-28,31;UBERON:0003056,3.62e-24,61;UBERON:0000076,3.55e-22,8;UBERON:0003075,1.21e-17,82;UBERON:0007284,1.21e-17,82;UBERON:0001444,2.84e-17,49;UBERON:0002346,9.37e-17,86;UBERON:0006876,9.69e-17,11;UBERON:0000033,5.60e-15,56;UBERON:0010371,1.35e-13,104;UBERON:0000153,2.01e-13,62;UBERON:0007811,2.01e-13,62;UBERON:0002506,1.25e-12,1;UBERON:0001769,1.25e-12,1;UBERON:0004121,2.97e-12,171;UBERON:0000924,2.97e-12,171;UBERON:0006601,2.97e-12,171;UBERON:0010314,2.27e-10,132;UBERON:0006955,5.11e-07,2;UBERON:0004801,5.11e-07,2 | |||
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| ||
|short_description=p11@PAX6 | |short_description=p11@PAX6 | ||
}} | }} |
Latest revision as of 14:51, 17 September 2015
Short description: | p11@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PAX6_5end |
Coexpression cluster: | C3140_argyrophil_Lens_Ciliary_eye_small_Astrocyte_Iris |
Association with transcript: | 0bp_to_ENST00000533156_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 6.27e-44 | 4 |
vertebrate lens cell | 6.27e-44 | 4 |
lens epithelial cell | 6.27e-44 | 4 |
ciliated cell | 1.39e-34 | 3 |
ciliated epithelial cell | 1.39e-34 | 3 |
multi-ciliated epithelial cell | 1.39e-34 | 3 |
non-pigmented ciliary epithelial cell | 1.39e-34 | 3 |
astrocyte of the cerebral cortex | 3.85e-34 | 3 |
columnar/cuboidal epithelial cell | 1.51e-19 | 27 |
oligodendrocyte | 5.04e-15 | 7 |
macroglial cell | 5.04e-15 | 7 |
astrocyte | 5.04e-15 | 7 |
oligodendrocyte precursor cell | 5.04e-15 | 7 |
neural cell | 2.61e-14 | 25 |
neurectodermal cell | 1.24e-13 | 59 |
neuronal stem cell | 9.33e-13 | 8 |
pigment cell (sensu Vertebrata) | 1.25e-12 | 1 |
iris pigment epithelial cell | 1.25e-12 | 1 |
ectodermal cell | 4.83e-11 | 72 |
epithelial cell of cervix | 5.11e-07 | 2 |