FFCP PHASE1:Hg19::chr13:48987241..48987260,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10161 | |EntrezGene=10161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=15520 | |HGNC=15520 | ||
|TSSclassifier=strong | |||
|UniProt=B3KVQ5,F2YGU4,P43657 | |UniProt=B3KVQ5,F2YGU4,P43657 | ||
|association_with_transcript=392bp_to_NM_001162498,uc010acu.2_5end | |association_with_transcript=392bp_to_NM_001162498,uc010acu.2_5end | ||
|cluster_id=chr13:48987241..48987260,- | |||
|coexpression_cluster_id=C3377 | |||
|description=CAGE_peak_1_at_LPAR6_5end | |description=CAGE_peak_1_at_LPAR6_5end | ||
|id=chr13:48987241..48987260,- | |id=chr13:48987241..48987260,- | ||
|ontology_enrichment_celltype=CL:0002057!1.73e-18!42;CL:0002009!4.79e-17!65;CL:0002194!4.53e-16!63;CL:0000576!4.53e-16!63;CL:0000040!4.53e-16!63;CL:0000559!4.53e-16!63;CL:0000860!4.49e-15!45;CL:0000557!4.76e-14!71;CL:0000839!1.89e-12!70;CL:0000766!1.94e-12!76;CL:0002087!2.86e-12!119;CL:0000738!4.68e-11!140;CL:0002031!1.22e-10!124;CL:0000791!1.55e-09!18;CL:0000789!1.55e-09!18;CL:0002420!1.55e-09!18;CL:0002419!1.55e-09!18;CL:0000790!1.55e-09!18 | |ontology_enrichment_celltype=CL:0002057!1.73e-18!42;CL:0002009!4.79e-17!65;CL:0002194!4.53e-16!63;CL:0000576!4.53e-16!63;CL:0000040!4.53e-16!63;CL:0000559!4.53e-16!63;CL:0000860!4.49e-15!45;CL:0000557!4.76e-14!71;CL:0000839!1.89e-12!70;CL:0000766!1.94e-12!76;CL:0002087!2.86e-12!119;CL:0000738!4.68e-11!140;CL:0002031!1.22e-10!124;CL:0000791!1.55e-09!18;CL:0000789!1.55e-09!18;CL:0002420!1.55e-09!18;CL:0002419!1.55e-09!18;CL:0000790!1.55e-09!18 | ||
|ontology_enrichment_celltype_v019=CL:0000473;7.51e-14;39!CL:0000234;7.51e-14;39!CL:0000860;8.26e-14;33!CL:0002057;8.26e-14;33!CL:0000576;1.41e-12;48!CL:0000791;1.20e-09;18!CL:0000789;1.20e-09;18!CL:0002419;1.20e-09;18!CL:0000766;7.17e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.30e-21,48;CL:0000234,1.30e-21,48;CL:0002009,1.82e-20,61;CL:0002194,2.04e-19,59;CL:0000576,2.04e-19,59;CL:0000040,2.04e-19,59;CL:0000559,2.04e-19,59;CL:0000860,1.03e-18,42;CL:0002057,1.03e-18,42;CL:0000557,5.95e-17,67;CL:0000839,3.27e-15,66;CL:0000766,3.95e-15,72;CL:0002087,6.09e-14,115;CL:0000738,1.50e-12,136;CL:0002031,3.55e-12,120;CL:0000791,1.21e-09,18;CL:0000789,1.21e-09,18;CL:0002420,1.21e-09,18;CL:0002419,1.21e-09,18;CL:0000790,1.21e-09,18;CL:0000763,4.62e-08,108;CL:0000049,4.62e-08,108;CL:0000037,3.11e-07,168;CL:0002032,4.24e-07,161;CL:0000837,4.24e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-13;42!CL:0000790;1.20e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.44e-23!115;UBERON:0002193!3.84e-18!112;UBERON:0002390!4.22e-17!102;UBERON:0003061!4.22e-17!102;UBERON:0002405!2.80e-14!115;UBERON:0002371!2.90e-12!80;UBERON:0001474!1.31e-09!86;UBERON:0004765!2.39e-08!101;UBERON:0001434!2.39e-08!101 | |ontology_enrichment_uberon=UBERON:0007023!1.44e-23!115;UBERON:0002193!3.84e-18!112;UBERON:0002390!4.22e-17!102;UBERON:0003061!4.22e-17!102;UBERON:0002405!2.80e-14!115;UBERON:0002371!2.90e-12!80;UBERON:0001474!1.31e-09!86;UBERON:0004765!2.39e-08!101;UBERON:0001434!2.39e-08!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.17e-23,114;UBERON:0002193,7.46e-21,108;UBERON:0002390,8.82e-20,98;UBERON:0003061,8.82e-20,98;UBERON:0002405,3.43e-17,93;UBERON:0002371,1.17e-14,76;UBERON:0001474,9.17e-12,82;UBERON:0004765,2.90e-11,90;UBERON:0001434,6.11e-10,100;UBERON:0003081,1.43e-07,203 | |||
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| ||
|short_description=p1@LPAR6 | |short_description=p1@LPAR6 | ||
}} | }} |
Latest revision as of 15:25, 17 September 2015
Short description: | p1@LPAR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPAR6_5end |
Coexpression cluster: | C3377_CD14_CD4_acute_immature_esophagus_NK_CD14CD16 |
Association with transcript: | 392bp_to_NM_001162498, uc010acu.2_5end |
EntrezGene: | LPAR6 |
HGNC: | 15520 |
UniProt: | B3KVQ5F2YGU4P43657 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.30e-21 | 48 |
phagocyte | 1.30e-21 | 48 |
macrophage dendritic cell progenitor | 1.82e-20 | 61 |
monopoietic cell | 2.04e-19 | 59 |
monocyte | 2.04e-19 | 59 |
monoblast | 2.04e-19 | 59 |
promonocyte | 2.04e-19 | 59 |
classical monocyte | 1.03e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-18 | 42 |
granulocyte monocyte progenitor cell | 5.95e-17 | 67 |
myeloid lineage restricted progenitor cell | 3.27e-15 | 66 |
myeloid leukocyte | 3.95e-15 | 72 |
nongranular leukocyte | 6.09e-14 | 115 |
leukocyte | 1.50e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 3.55e-12 | 120 |
mature alpha-beta T cell | 1.21e-09 | 18 |
alpha-beta T cell | 1.21e-09 | 18 |
immature T cell | 1.21e-09 | 18 |
mature T cell | 1.21e-09 | 18 |
immature alpha-beta T cell | 1.21e-09 | 18 |
myeloid cell | 4.62e-08 | 108 |
common myeloid progenitor | 4.62e-08 | 108 |
hematopoietic stem cell | 3.11e-07 | 168 |
hematopoietic oligopotent progenitor cell | 4.24e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.24e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.17e-23 | 114 |
hemolymphoid system | 7.46e-21 | 108 |
hematopoietic system | 8.82e-20 | 98 |
blood island | 8.82e-20 | 98 |
immune system | 3.43e-17 | 93 |
bone marrow | 1.17e-14 | 76 |
bone element | 9.17e-12 | 82 |
skeletal element | 2.90e-11 | 90 |
skeletal system | 6.11e-10 | 100 |
lateral plate mesoderm | 1.43e-07 | 203 |