FFCP PHASE1:Hg19::chr11:32457350..32457361,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=18135 | |HGNC=18135 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000525436_5end | |association_with_transcript=3bp_to_ENST00000525436_5end | ||
|cluster_id=chr11:32457350..32457361,+ | |||
|coexpression_cluster_id=C1633 | |coexpression_cluster_id=C1633 | ||
|description=CAGE_peak_5_at_WT1-AS_5end | |description=CAGE_peak_5_at_WT1-AS_5end | ||
|id=chr11:32457350..32457361,+ | |id=chr11:32457350..32457361,+ | ||
|ontology_enrichment_celltype=CL:0000077!3.64e-09!19;CL:0000632!6.79e-07!2 | |ontology_enrichment_celltype=CL:0000077!3.64e-09!19;CL:0000632!6.79e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000650;1.98e-23;2!CL:1000500;1.98e-23;2!CL:1000618;1.98e-23;2!CL:1001318;1.98e-23;2!CL:0002173;1.98e-23;2!CL:0000632;3.69e-16;3!CL:0002601;2.46e-12;1!CL:0000669;3.26e-12;4!CL:1000746;2.37e-07;7!CL:1000612;2.37e-07;7!CL:0002097;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,1.99e-23,2;CL:1000500,1.99e-23,2;CL:1000618,1.99e-23,2;CL:1001318,1.99e-23,2;CL:0002173,1.99e-23,2;CL:0000632,3.18e-16,3;CL:0000669,3.27e-12,4;CL:0002601,4.81e-12,1;CL:1000746,2.37e-07,7;CL:1000612,2.37e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.68e-10!31;DOID:2394!3.03e-10!14;DOID:1240!9.62e-08!39;DOID:0050686!8.03e-07!137 | |ontology_enrichment_disease=DOID:8692!1.68e-10!31;DOID:2394!3.03e-10!14;DOID:1240!9.62e-08!39;DOID:0050686!8.03e-07!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!5.04e-13!48;UBERON:0005156!3.69e-12!59;UBERON:0000990!3.69e-12!59;UBERON:0003134!1.48e-10!37;UBERON:0000474!1.48e-10!37;UBERON:0003100!3.41e-09!41;UBERON:0004175!1.07e-08!25 | |ontology_enrichment_uberon=UBERON:0003133!5.04e-13!48;UBERON:0005156!3.69e-12!59;UBERON:0000990!3.69e-12!59;UBERON:0003134!1.48e-10!37;UBERON:0000474!1.48e-10!37;UBERON:0003100!3.41e-09!41;UBERON:0004175!1.07e-08!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0003567;1.98e-23;2!UBERON:0003838;1.98e-23;2!UBERON:0003586;1.98e-23;2!UBERON:0005169;1.98e-23;2!UBERON:0002321;1.98e-23;2!UBERON:0005215;1.98e-23;2!UBERON:0002303;1.98e-23;2!UBERON:0002319;1.98e-23;2!UBERON:0006834;9.36e-13;1!UBERON:0003891;3.26e-12;4!UBERON:0000995;8.98e-11;17!UBERON:0003975;3.47e-10;18!UBERON:0004175;9.29e-09;21!UBERON:0005172;3.75e-08;52!UBERON:0005173;3.75e-08;52!UBERON:0000074;2.37e-07;7!UBERON:0001229;2.37e-07;7!UBERON:0001851;2.95e-07;15!UBERON:0003134;3.79e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,1.99e-23,2;UBERON:0003838,1.99e-23,2;UBERON:0003586,1.99e-23,2;UBERON:0005169,1.99e-23,2;UBERON:0002321,1.99e-23,2;UBERON:0005215,1.99e-23,2;UBERON:0002303,1.99e-23,2;UBERON:0002319,1.99e-23,2;UBERON:0006834,9.92e-13,1;UBERON:0003891,3.27e-12,4;UBERON:0005172,1.72e-09,54;UBERON:0005173,1.72e-09,54;UBERON:0003887,6.34e-09,12;UBERON:0000995,1.21e-08,21;UBERON:0002417,1.78e-08,60;UBERON:0000916,1.78e-08,60;UBERON:0005795,2.94e-08,22;UBERON:0003975,2.94e-08,22;UBERON:0003134,2.13e-07,37;UBERON:0000474,2.13e-07,37;UBERON:0010532,2.37e-07,7;UBERON:0000074,2.37e-07,7;UBERON:0001229,2.37e-07,7;UBERON:0001230,2.37e-07,7;UBERON:0003220,2.37e-07,7;UBERON:0005749,2.37e-07,7;UBERON:0004199,2.37e-07,7;UBERON:0004209,2.37e-07,7;UBERON:0004198,2.37e-07,7;UBERON:0004175,2.75e-07,25;UBERON:0001851,3.15e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0,0,0.904318131178758,0,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,1.35473218771926,3.01013864312912,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,1.06428319221179,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48171507906718,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0,0,0.278406173895242,1.23087398947712,0,0.99921590399346,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43176155503017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38545801361771,0,0,0,0,0.638002319463839,0.824378340616761,0,0,0.156980256395025,0.664846727600626,0,0.392125068635479,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,1.52118305591495,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0.653174720218818,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0.449803112163605,0.621051827505038,0,0.265841714557995,0,0.450772826991655,1.90402606084398,0,0.181848659202559,0.644463342254931,0,0,0,0,0,0,0,1.28664954824955,0.521988583930423,0,0,0,0.179088841081487,0.308801447160972,0,0.176689145945881,0.964570191354574,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0.960225567247268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95546853708069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.751871343838829,1.28915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.833565680400634,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0,0,2.44482888365733,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0,0,0.904318131178758,0,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,1.35473218771926,3.01013864312912,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,1.06428319221179,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48171507906718,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0,0,0.278406173895242,1.23087398947712,0,0.99921590399346,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43176155503017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38545801361771,0,0,0,0,0.638002319463839,0.824378340616761,0,0,0.156980256395025,0.664846727600626,0,0.392125068635479,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,1.52118305591495,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0.653174720218818,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0.449803112163605,0.621051827505038,0,0.265841714557995,0,0.450772826991655,1.90402606084398,0,0.181848659202559,0.644463342254931,0,0,0,0,0,0,0,1.28664954824955,0.521988583930423,0,0,0,0.179088841081487,0.308801447160972,0,0.176689145945881,0.964570191354574,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0.960225567247268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95546853708069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.751871343838829,1.28915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.833565680400634,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0,0,2.44482888365733,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p5@WT1-AS | |short_description=p5@WT1-AS | ||
}} | }} |
Latest revision as of 15:35, 17 September 2015
Short description: | p5@WT1-AS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_WT1-AS_5end |
Coexpression cluster: | C1633_uterus_kidney_ovary_Hepatic_Mesothelial_Renal_spleen |
Association with transcript: | 3bp_to_ENST00000525436_5end |
EntrezGene: | NA |
HGNC: | 18135 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 1.99e-23 | 2 |
kidney interstitial cell | 1.99e-23 | 2 |
juxtaglomerular complex cell | 1.99e-23 | 2 |
renal interstitial pericyte | 1.99e-23 | 2 |
extraglomerular mesangial cell | 1.99e-23 | 2 |
hepatic stellate cell | 3.18e-16 | 3 |
pericyte cell | 3.27e-12 | 4 |
uterine smooth muscle cell | 4.81e-12 | 1 |
glomerular cell | 2.37e-07 | 7 |
kidney corpuscule cell | 2.37e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 1.99e-23 | 2 |
abdominal segment connective tissue | 1.99e-23 | 2 |
trunk connective tissue | 1.99e-23 | 2 |
interstitial tissue | 1.99e-23 | 2 |
extraglomerular mesangium | 1.99e-23 | 2 |
kidney interstitium | 1.99e-23 | 2 |
juxtaglomerular apparatus | 1.99e-23 | 2 |
mesangium | 1.99e-23 | 2 |
uterus or analog | 9.92e-13 | 1 |
stroma | 3.27e-12 | 4 |
abdomen element | 1.72e-09 | 54 |
abdominal segment element | 1.72e-09 | 54 |
intraembryonic coelom | 6.34e-09 | 12 |
uterus | 1.21e-08 | 21 |
abdominal segment of trunk | 1.78e-08 | 60 |
abdomen | 1.78e-08 | 60 |
embryonic uterus | 2.94e-08 | 22 |
internal female genitalia | 2.94e-08 | 22 |
female reproductive organ | 2.13e-07 | 37 |
female reproductive system | 2.13e-07 | 37 |
primitive nephron | 2.37e-07 | 7 |
renal glomerulus | 2.37e-07 | 7 |
renal corpuscle | 2.37e-07 | 7 |
glomerular capsule | 2.37e-07 | 7 |
metanephric mesenchyme | 2.37e-07 | 7 |
glomerular tuft | 2.37e-07 | 7 |
S-shaped body | 2.37e-07 | 7 |
renal vesicle | 2.37e-07 | 7 |
comma-shaped body | 2.37e-07 | 7 |
internal genitalia | 2.75e-07 | 25 |
cortex | 3.15e-07 | 15 |