FFCP PHASE1:Hg19::chr13:49110026..49110037,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1102 | |EntrezGene=1102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1914 | |HGNC=1914 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=80bp_to_uc001vcj.2_5end | |association_with_transcript=80bp_to_uc001vcj.2_5end | ||
|cluster_id=chr13:49110026..49110037,- | |||
|coexpression_cluster_id=C433 | |coexpression_cluster_id=C433 | ||
|description=CAGE_peak_15_at_RCBTB2_5end | |description=CAGE_peak_15_at_RCBTB2_5end | ||
|id=chr13:49110026..49110037,- | |id=chr13:49110026..49110037,- | ||
|ontology_enrichment_celltype=CL:0002194!1.51e-47!63;CL:0000576!1.51e-47!63;CL:0000040!1.51e-47!63;CL:0000559!1.51e-47!63;CL:0002009!6.48e-46!65;CL:0000839!3.10e-42!70;CL:0000557!1.46e-41!71;CL:0000766!1.59e-41!76;CL:0002057!4.87e-40!42;CL:0000860!4.75e-37!45;CL:0000763!2.18e-28!112;CL:0000049!2.18e-28!112;CL:0002087!2.70e-26!119;CL:0000738!4.00e-23!140;CL:0002031!2.91e-21!124;CL:0002393!4.21e-19!9;CL:0002397!4.21e-19!9;CL:0000037!4.66e-19!172;CL:0000566!4.66e-19!172;CL:0000988!1.23e-17!182;CL:0002032!3.35e-17!165;CL:0000837!3.35e-17!165;CL:0000875!3.11e-15!3;CL:0002396!3.11e-15!3;CL:0000235!4.90e-08!10;CL:0002619!4.13e-07!3;CL:0000842!9.34e-07!3 | |ontology_enrichment_celltype=CL:0002194!1.51e-47!63;CL:0000576!1.51e-47!63;CL:0000040!1.51e-47!63;CL:0000559!1.51e-47!63;CL:0002009!6.48e-46!65;CL:0000839!3.10e-42!70;CL:0000557!1.46e-41!71;CL:0000766!1.59e-41!76;CL:0002057!4.87e-40!42;CL:0000860!4.75e-37!45;CL:0000763!2.18e-28!112;CL:0000049!2.18e-28!112;CL:0002087!2.70e-26!119;CL:0000738!4.00e-23!140;CL:0002031!2.91e-21!124;CL:0002393!4.21e-19!9;CL:0002397!4.21e-19!9;CL:0000037!4.66e-19!172;CL:0000566!4.66e-19!172;CL:0000988!1.23e-17!182;CL:0002032!3.35e-17!165;CL:0000837!3.35e-17!165;CL:0000875!3.11e-15!3;CL:0002396!3.11e-15!3;CL:0000235!4.90e-08!10;CL:0002619!4.13e-07!3;CL:0000842!9.34e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000235;9.20e-31;6!CL:0002393;4.82e-30;6!CL:0002397;4.82e-30;6!CL:0000875;7.02e-08;3!CL:0002396;7.02e-08;3!CL:0000766;1.28e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.55e-35,9;CL:0002397,2.55e-35,9;CL:0000235,9.21e-31,6;CL:0000473,4.36e-20,48;CL:0000234,4.36e-20,48;CL:0002194,4.85e-16,59;CL:0000576,4.85e-16,59;CL:0000040,4.85e-16,59;CL:0000559,4.85e-16,59;CL:0002009,1.62e-15,61;CL:0000839,2.41e-14,66;CL:0000557,3.94e-14,67;CL:0000766,3.78e-13,72;CL:0000763,1.02e-08,108;CL:0000049,1.02e-08,108;CL:0002087,3.59e-08,115;CL:0000875,6.34e-08,3;CL:0002396,6.34e-08,3;CL:0000860,6.84e-08,42;CL:0002057,6.84e-08,42;CL:0002031,8.06e-08,120;CL:0000738,7.27e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.71e-42!102;UBERON:0003061!1.71e-42!102;UBERON:0002193!1.26e-40!112;UBERON:0002371!3.06e-36!80;UBERON:0001474!2.64e-33!86;UBERON:0004765!1.78e-27!101;UBERON:0001434!1.78e-27!101;UBERON:0002405!2.28e-27!115;UBERON:0003081!1.28e-17!216;UBERON:0002204!3.17e-14!167;UBERON:0000178!1.42e-07!15;UBERON:0000179!1.42e-07!15;UBERON:0000463!1.42e-07!15;UBERON:0000926!4.04e-07!448;UBERON:0004120!4.04e-07!448;UBERON:0006603!4.04e-07!448 | |ontology_enrichment_uberon=UBERON:0002390!1.71e-42!102;UBERON:0003061!1.71e-42!102;UBERON:0002193!1.26e-40!112;UBERON:0002371!3.06e-36!80;UBERON:0001474!2.64e-33!86;UBERON:0004765!1.78e-27!101;UBERON:0001434!1.78e-27!101;UBERON:0002405!2.28e-27!115;UBERON:0003081!1.28e-17!216;UBERON:0002204!3.17e-14!167;UBERON:0000178!1.42e-07!15;UBERON:0000179!1.42e-07!15;UBERON:0000463!1.42e-07!15;UBERON:0000926!4.04e-07!448;UBERON:0004120!4.04e-07!448;UBERON:0006603!4.04e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.71e-21;1!UBERON:0006518;5.71e-21;1!UBERON:0008949;5.71e-21;1!UBERON:0000101;5.71e-21;1!UBERON:0002167;5.71e-21;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,7.72e-21,1;UBERON:0006518,7.72e-21,1;UBERON:0008949,7.72e-21,1;UBERON:0000101,7.72e-21,1;UBERON:0002167,7.72e-21,1;UBERON:0002390,7.63e-16,98;UBERON:0003061,7.63e-16,98;UBERON:0002193,2.35e-14,108;UBERON:0002371,1.87e-12,76;UBERON:0001474,1.55e-11,82;UBERON:0004765,1.69e-10,90;UBERON:0002405,3.72e-10,93;UBERON:0001434,1.97e-09,100;UBERON:0003081,1.95e-07,203 | |||
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|short_description=p15@RCBTB2 | |short_description=p15@RCBTB2 | ||
}} | }} |
Latest revision as of 15:56, 17 September 2015
Short description: | p15@RCBTB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RCBTB2_5end |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | 80bp_to_uc001vcj.2_5end |
EntrezGene: | RCBTB2 |
HGNC: | 1914 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.55e-35 | 9 |
CD14-positive, CD16-positive monocyte | 2.55e-35 | 9 |
macrophage | 9.21e-31 | 6 |
defensive cell | 4.36e-20 | 48 |
phagocyte | 4.36e-20 | 48 |
monopoietic cell | 4.85e-16 | 59 |
monocyte | 4.85e-16 | 59 |
monoblast | 4.85e-16 | 59 |
promonocyte | 4.85e-16 | 59 |
macrophage dendritic cell progenitor | 1.62e-15 | 61 |
myeloid lineage restricted progenitor cell | 2.41e-14 | 66 |
granulocyte monocyte progenitor cell | 3.94e-14 | 67 |
myeloid leukocyte | 3.78e-13 | 72 |
myeloid cell | 1.02e-08 | 108 |
common myeloid progenitor | 1.02e-08 | 108 |
nongranular leukocyte | 3.59e-08 | 115 |
non-classical monocyte | 6.34e-08 | 3 |
CD14-low, CD16-positive monocyte | 6.34e-08 | 3 |
classical monocyte | 6.84e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.84e-08 | 42 |
hematopoietic lineage restricted progenitor cell | 8.06e-08 | 120 |
leukocyte | 7.27e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 7.72e-21 | 1 |
right lung lobe | 7.72e-21 | 1 |
lower lobe of lung | 7.72e-21 | 1 |
lobe of lung | 7.72e-21 | 1 |
right lung | 7.72e-21 | 1 |
hematopoietic system | 7.63e-16 | 98 |
blood island | 7.63e-16 | 98 |
hemolymphoid system | 2.35e-14 | 108 |
bone marrow | 1.87e-12 | 76 |
bone element | 1.55e-11 | 82 |
skeletal element | 1.69e-10 | 90 |
immune system | 3.72e-10 | 93 |
skeletal system | 1.97e-09 | 100 |
lateral plate mesoderm | 1.95e-07 | 203 |