FFCP PHASE1:Hg19::chr11:33278811..33279020,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10114 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4915 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H422 | |||
|association_with_transcript=-112bp_to_ENST00000303296,ENST00000379016_5end | |||
|cluster_id=chr11:33278811..33279020,+ | |||
|coexpression_cluster_id=C3145 | |||
|description=CAGE_peak_1_at_HIPK3_5end | |||
|id=chr11:33278811..33279020,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.96e-30!76;CL:0000557!1.04e-29!71;CL:0002009!1.41e-27!65;CL:0002194!8.11e-27!63;CL:0000576!8.11e-27!63;CL:0000040!8.11e-27!63;CL:0000559!8.11e-27!63;CL:0000839!1.30e-26!70;CL:0002057!1.64e-24!42;CL:0000738!1.04e-23!140;CL:0000860!1.18e-22!45;CL:0002031!8.12e-21!124;CL:0002087!1.50e-19!119;CL:0000763!4.77e-19!112;CL:0000049!4.77e-19!112;CL:0000037!1.42e-16!172;CL:0000566!1.42e-16!172;CL:0002032!2.61e-16!165;CL:0000837!2.61e-16!165;CL:0000988!4.20e-14!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-19;33!CL:0002057;1.14e-19;33!CL:0000473;2.76e-18;39!CL:0000234;2.76e-18;39!CL:0000576;3.59e-17;48!CL:0000766;5.94e-14;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.20e-32,72;CL:0000557,2.63e-31,67;CL:0002009,3.32e-29,61;CL:0002194,1.87e-28,59;CL:0000576,1.87e-28,59;CL:0000040,1.87e-28,59;CL:0000559,1.87e-28,59;CL:0000839,4.63e-28,66;CL:0000473,1.21e-26,48;CL:0000234,1.21e-26,48;CL:0000860,1.64e-24,42;CL:0002057,1.64e-24,42;CL:0000738,2.70e-24,136;CL:0002031,2.08e-21,120;CL:0002087,3.94e-20,115;CL:0000763,1.18e-19,108;CL:0000049,1.18e-19,108;CL:0000037,6.86e-17,168;CL:0002032,1.23e-16,161;CL:0000837,1.23e-16,161;CL:0000988,8.41e-15,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.19e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.32e-34!115;UBERON:0002390!6.82e-28!102;UBERON:0003061!6.82e-28!102;UBERON:0002193!7.43e-25!112;UBERON:0002371!9.78e-24!80;UBERON:0001474!2.31e-21!86;UBERON:0002405!5.02e-18!115;UBERON:0004765!1.25e-16!101;UBERON:0001434!1.25e-16!101;UBERON:0001049!1.57e-07!57;UBERON:0005068!1.57e-07!57;UBERON:0006241!1.57e-07!57;UBERON:0007135!1.57e-07!57;UBERON:0000062!6.89e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.73e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.09e-34,114;UBERON:0002390,6.86e-29,98;UBERON:0003061,6.86e-29,98;UBERON:0002193,1.18e-25,108;UBERON:0002371,7.59e-25,76;UBERON:0001474,2.78e-22,82;UBERON:0002405,8.28e-22,93;UBERON:0004765,4.07e-19,90;UBERON:0001434,3.39e-16,100;UBERON:0001049,4.26e-07,56;UBERON:0005068,4.26e-07,56;UBERON:0006241,4.26e-07,56;UBERON:0007135,4.26e-07,56 | |||
|phase1_expression=62.1340057105304,48.8149194471442,50.6026310704536,39.0285863577209,37.0977708374649,31.4041868676133,32.9289841618804,26.5322346839269,24.0290777943851,8.10921990454979,12.5604210235037,23.8101095621888,11.078213085595,12.6241680019248,17.2326635378516,20.1697543935533,19.2862248967673,10.2243412654232,12.6862527685532,7.51038454268406,11.0160373271897,10.0305510872988,18.0328671892566,19.5730427854224,17.9525974620568,20.1731391174591,17.9800290895381,19.8351168910472,24.388585164632,25.332740274416,56.3530688870517,18.3884244895785,13.253060426243,18.1179464981726,16.0357105201224,17.202477130978,33.1768496448377,55.9535362617196,62.9709565056245,60.9800546711544,65.3833184780579,78.706160842612,100.454471377333,122.716113529953,142.83710671437,160.105480383959,137.133131774354,145.553432359726,127.599024808783,152.189275538418,165.22365571127,116.112774875295,116.868785769714,107.150457474915,92.0900108841524,100.521409315751,106.160492372502,88.3163293869183,127.636983118666,124.520462505524,138.736156298392,195.931672310909,173.333918473198,197.342059496637,130.303948144234,198.017443417208,173.14458522077,136.176776569155,141.321870891875,102.513134700815,150.139076653075,113.42951188417,126.584954976354,64.4328623251422,60.3796211900724,64.3652041710714,89.8629049171961,88.6043667764887,89.2027006168795,71.5381986790534,79.9645042340342,68.864385969267,47.5189860045571,37.1374255658249,62.2656477704488,42.6730222566507,36.8364308073131,41.9569281166773,48.2562757132949,45.7945802176975,67.1671303549149,58.7237189370939,48.1664267437788,37.0079720021272,28.5859367120583,28.7088652404834,32.4571120687825,29.0827964434382,46.4659387738891,27.7529582348526,38.7847497293973,40.2430634874523,29.2240092611867,29.523771074571,28.2821671175844,30.7932113471233,30.0592288779167,31.3823733327904,32.3847775424097,26.6389405457955,28.7404018497282,22.025034515864,40.4822317432425,36.385552620201,45.9956304741898,27.6474796182061,32.9569624497652,33.3318622118151,34.6636978066719,54.4746858494205,38.4139237775287,34.2162736001415,29.5127233392435,30.2048402324427,36.2299107001803,38.3579148311307,34.487375870684,38.9101014423734,38.2439479970415,37.7991694134105,63.38978524163,16.7675214925909,22.8873985699919,18.4333967716129,26.0695713530663,19.1197405028287,18.2915767821753,35.0377106617898,23.0664953880326,24.1685043234195,23.8032269228372,44.4673961314734,7.65020105414339,12.6066710546706,72.6986161786491,82.3633657425534,78.0463228245738,37.9200092645494,28.0277506282263,30.8309726103539,11.7269820346356,16.3444573070164,14.2327605659114,26.5694732704285,11.3264847776675,13.7559020970034,12.121708059135,27.3921764719489,33.7977949552375,40.5011941445251,8.86224497640123,16.7259863258073,13.6674752226975,13.971197053143,8.91156142669936,16.3418502759866,23.800113498374,23.761022381981,15.3316637465883,12.3404535743857,16.4881569537367,48.7587544513434,65.9226449052153,8.72188104285069,32.800148811891,13.2962037247809,23.0391974615001,26.9626423503885,18.4427558743146,18.5023608046961,18.1473292740498,12.0867098724408,42.9471228851678,23.304946268056,30.5673758822168,18.4656061726816,33.9943795443199,6.56100009134631,13.1107232268735,11.409436430889,10.9097536802815,11.1562773711577,9.87424960645602,11.9383185696911,19.19049209796,10.1952483368767,25.108164825711,32.0760771466154,37.3373063210621,8.19145225744224,5.03032699271367,7.91179735584111,11.7611408679646,17.7321033909877,19.3150153187569,25.1319992555196,37.4092766677426,11.4566504991621,24.2176008179964,30.3251492122366,28.6108066565408,19.8060123415706,20.7135583769262,31.1745053455211,21.5895553344644,30.0421871389454,20.9489561096577,26.2531125213879,31.665165132951,28.1264138864733,25.5606906611962,19.1428986632516,14.4126503463914,41.3578225769455,38.4572030033077,58.5081374593568,10.0018439026268,9.67467308746842,8.13357600086629,13.4759371519982,8.83122978064699,9.48941133597158,25.0319251727706,29.5890831568727,13.8134921352481,33.8988587463345,15.1594691150613,12.3039072041438,14.4982833467167,12.7735845838245,15.5514501552675,13.944284421914,14.710778384888,10.1123481120123,11.5770664423954,12.6966561792309,14.763109092493,9.81692416624121,10.289350283285,20.5812195939759,49.434463580514,63.8837690840457,49.0355622545565,9.71218818712231,41.8160691046586,15.2695351165688,33.693337620448,12.3641928583382,18.3968019513284,23.2396997347909,7.49359102213747,5.19967392639789,14.4331342025273,23.4179418049655,24.1861910125793,14.2922783283463,11.5746378144153,19.7864318323982,20.5453143469412,15.4527509177077,71.1567147592578,64.3511729132904,68.8162281396812,27.1828118561653,25.7012656144255,22.1169151698123,22.7478647665235,23.250715081117,19.5525166374258,45.8176811243227,40.1500859100311,67.1743094352101,61.5392201090425,72.2106719198893,20.8273093278314,27.8851550657543,16.4104426094066,15.3965201420435,12.5449541098055,17.1195542971033,27.1535110999049,7.96130698852061,10.899001720832,9.31396229926065,22.3640068260956,46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| |||
|short_description=p1@HIPK3 | |||
}} |
Latest revision as of 16:25, 17 September 2015
Short description: | p1@HIPK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HIPK3_5end |
Coexpression cluster: | C3145_Neutrophils_left_CD14_heart_Eosinophils_breast_mature |
Association with transcript: | -112bp_to_ENST00000303296, ENST00000379016_5end |
EntrezGene: | HIPK3 |
HGNC: | 4915 |
UniProt: | Q9H422 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.20e-32 | 72 |
granulocyte monocyte progenitor cell | 2.63e-31 | 67 |
macrophage dendritic cell progenitor | 3.32e-29 | 61 |
monopoietic cell | 1.87e-28 | 59 |
monocyte | 1.87e-28 | 59 |
monoblast | 1.87e-28 | 59 |
promonocyte | 1.87e-28 | 59 |
myeloid lineage restricted progenitor cell | 4.63e-28 | 66 |
defensive cell | 1.21e-26 | 48 |
phagocyte | 1.21e-26 | 48 |
classical monocyte | 1.64e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-24 | 42 |
leukocyte | 2.70e-24 | 136 |
hematopoietic lineage restricted progenitor cell | 2.08e-21 | 120 |
nongranular leukocyte | 3.94e-20 | 115 |
myeloid cell | 1.18e-19 | 108 |
common myeloid progenitor | 1.18e-19 | 108 |
hematopoietic stem cell | 6.86e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.23e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-16 | 161 |
hematopoietic cell | 8.41e-15 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.09e-34 | 114 |
hematopoietic system | 6.86e-29 | 98 |
blood island | 6.86e-29 | 98 |
hemolymphoid system | 1.18e-25 | 108 |
bone marrow | 7.59e-25 | 76 |
bone element | 2.78e-22 | 82 |
immune system | 8.28e-22 | 93 |
skeletal element | 4.07e-19 | 90 |
skeletal system | 3.39e-16 | 100 |
neural tube | 4.26e-07 | 56 |
neural rod | 4.26e-07 | 56 |
future spinal cord | 4.26e-07 | 56 |
neural keel | 4.26e-07 | 56 |