FFCP PHASE1:Hg19::chr12:16759711..16759718,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:16759711..16759718,- to FFCP PHASE1:Hg19::chr12:16759711..16759718,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55885 | |EntrezGene=55885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |HGNC=6643 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAP4 | |UniProt=Q8TAP4 | ||
|association_with_transcript=15bp_to_ENST00000447609,NM_001243610,uc001rdl.1_5end | |||
|cluster_id=chr12:16759711..16759718,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_21_at_LMO3_5end | |||
|id=chr12:16759711..16759718,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.20e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.87e-70!57;UBERON:0005068!2.87e-70!57;UBERON:0006241!2.87e-70!57;UBERON:0007135!2.87e-70!57;UBERON:0007023!1.65e-63!115;UBERON:0001017!2.02e-62!82;UBERON:0002616!1.43e-60!59;UBERON:0000955!1.69e-59!69;UBERON:0006238!1.69e-59!69;UBERON:0005743!8.36e-59!86;UBERON:0000073!8.29e-54!94;UBERON:0001016!8.29e-54!94;UBERON:0002346!2.05e-51!90;UBERON:0002780!3.50e-51!41;UBERON:0001890!3.50e-51!41;UBERON:0006240!3.50e-51!41;UBERON:0003080!9.99e-50!42;UBERON:0001893!3.56e-49!34;UBERON:0002020!4.17e-49!34;UBERON:0003528!4.17e-49!34;UBERON:0003075!5.15e-48!86;UBERON:0007284!5.15e-48!86;UBERON:0002791!3.16e-47!33;UBERON:0001869!1.24e-45!32;UBERON:0002619!4.51e-38!22;UBERON:0001950!2.88e-34!20;UBERON:0000956!7.12e-33!25;UBERON:0000203!7.12e-33!25;UBERON:0003056!4.60e-31!61;UBERON:0000033!3.94e-30!123;UBERON:0000153!2.52e-29!129;UBERON:0007811!2.52e-29!129;UBERON:0000924!8.16e-28!173;UBERON:0006601!8.16e-28!173;UBERON:0004121!2.37e-25!169;UBERON:0003076!8.13e-21!15;UBERON:0003057!8.13e-21!15;UBERON:0002420!2.61e-18!9;UBERON:0007245!2.61e-18!9;UBERON:0010009!2.61e-18!9;UBERON:0010011!2.61e-18!9;UBERON:0000454!2.61e-18!9;UBERON:0002308!8.07e-18!9;UBERON:0000125!8.07e-18!9;UBERON:0000025!2.56e-17!194;UBERON:0004733!2.85e-15!12;UBERON:0002028!2.85e-15!12;UBERON:0007277!2.85e-15!12;UBERON:0004111!9.54e-15!241;UBERON:0009663!3.44e-14!7;UBERON:0004732!6.52e-14!13;UBERON:0000483!7.63e-14!309;UBERON:0000477!8.05e-14!286;UBERON:0000119!1.53e-13!312;UBERON:0000475!1.74e-13!365;UBERON:0000200!6.15e-13!6;UBERON:0001871!7.01e-13!7;UBERON:0002298!4.44e-12!8;UBERON:0000349!1.54e-11!5;UBERON:0001872!1.71e-11!5;UBERON:0002680!2.16e-10!9;UBERON:0001895!2.16e-10!9;UBERON:0010092!2.16e-10!9;UBERON:0000369!3.12e-09!4;UBERON:0002435!3.12e-09!4;UBERON:0000204!3.12e-09!4;UBERON:0010082!3.12e-09!4;UBERON:0000064!4.46e-08!219;UBERON:0000481!5.56e-08!347;UBERON:0002240!1.92e-07!3;UBERON:0002021!2.03e-07!5;UBERON:0005383!2.86e-07!3;UBERON:0005382!2.86e-07!3;UBERON:0000988!3.24e-07!3;UBERON:0002771!3.98e-07!3;UBERON:0006331!5.63e-07!3;UBERON:0000923!6.17e-07!604;UBERON:0005291!6.17e-07!604;UBERON:0006598!6.17e-07!604;UBERON:0002532!6.17e-07!604;UBERON:0002050!6.88e-07!605;UBERON:0005423!6.88e-07!605;UBERON:0001896!9.48e-07!3;UBERON:0005290!9.48e-07!3;UBERON:0010096!9.48e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.04e-61;22!UBERON:0001950;1.94e-57;20!UBERON:0001869;1.40e-56;32!UBERON:0000956;4.24e-54;25!UBERON:0000203;4.24e-54;25!UBERON:0001893;2.74e-51;34!UBERON:0002791;1.97e-50;32!UBERON:0003528;5.52e-49;34!UBERON:0002020;5.52e-49;34!UBERON:0002780;1.48e-36;41!UBERON:0001890;1.48e-36;41!UBERON:0000073;4.08e-30;53!UBERON:0002616;4.08e-30;53!UBERON:0000349;4.25e-28;5!UBERON:0001872;8.83e-28;5!UBERON:0001871;3.67e-20;6!UBERON:0000955;9.67e-19;68!UBERON:0001876;1.25e-18;2!UBERON:0001016;4.32e-18;83!UBERON:0001017;7.17e-16;75!UBERON:0002420;9.69e-16;9!UBERON:0007245;9.69e-16;9!UBERON:0010009;9.69e-16;9!UBERON:0010011;9.69e-16;9!UBERON:0000454;9.69e-16;9!UBERON:0000200;1.56e-13;6!UBERON:0002022;2.16e-10;1!UBERON:0002581;5.53e-10;1!UBERON:0002902;5.53e-10;1!UBERON:0001882;5.53e-10;1!UBERON:0003112;5.53e-10;1!UBERON:0011158;5.53e-10;1!UBERON:0009899;5.53e-10;1!UBERON:0007190;5.53e-10;1!UBERON:0003128;5.53e-10;1!UBERON:0005403;5.53e-10;1!UBERON:0001703;5.53e-10;1!UBERON:0002241;5.53e-10;1!UBERON:0000369;1.39e-09;4!UBERON:0002435;1.39e-09;4!UBERON:0000204;1.39e-09;4!UBERON:0002021;7.76e-08;5!UBERON:0007023;3.04e-07;114!UBERON:0011216;5.82e-07;132!UBERON:0010314;6.45e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.90e-64,32;UBERON:0002619,1.54e-61,22;UBERON:0001893,1.89e-60,34;UBERON:0001950,1.22e-57,20;UBERON:0002791,1.79e-56,32;UBERON:0000956,3.30e-54,25;UBERON:0000203,3.30e-54,25;UBERON:0003528,4.13e-53,34;UBERON:0002020,4.13e-53,34;UBERON:0001049,1.23e-51,56;UBERON:0005068,1.23e-51,56;UBERON:0006241,1.23e-51,56;UBERON:0007135,1.23e-51,56;UBERON:0002780,5.89e-50,41;UBERON:0001890,5.89e-50,41;UBERON:0003080,5.89e-50,41;UBERON:0006240,5.89e-50,41;UBERON:0000073,8.48e-49,53;UBERON:0002616,8.48e-49,53;UBERON:0000955,1.40e-41,68;UBERON:0006238,1.40e-41,68;UBERON:0001017,1.24e-38,81;UBERON:0001016,1.48e-34,89;UBERON:0003075,1.51e-34,82;UBERON:0007284,1.51e-34,82;UBERON:0003056,5.19e-33,61;UBERON:0002346,8.02e-33,86;UBERON:0000349,4.75e-28,5;UBERON:0001872,5.85e-28,5;UBERON:0010371,1.11e-26,104;UBERON:0010314,6.47e-23,132;UBERON:0007023,1.30e-21,114;UBERON:0001871,3.26e-20,6;UBERON:0001876,7.03e-19,2;UBERON:0004121,8.59e-17,171;UBERON:0000924,8.59e-17,171;UBERON:0006601,8.59e-17,171;UBERON:0002420,8.18e-16,9;UBERON:0007245,8.18e-16,9;UBERON:0010009,8.18e-16,9;UBERON:0010011,8.18e-16,9;UBERON:0000454,8.18e-16,9;UBERON:0011216,1.21e-13,223;UBERON:0000200,1.98e-13,6;UBERON:0000025,4.22e-13,192;UBERON:0002022,2.16e-10,1;UBERON:0003112,2.84e-10,1;UBERON:0011158,2.84e-10,1;UBERON:0003128,2.84e-10,1;UBERON:0001703,2.84e-10,1;UBERON:0002241,2.84e-10,1;UBERON:0004761,2.84e-10,1;UBERON:0009617,2.84e-10,1;UBERON:0002581,5.79e-10,1;UBERON:0002902,6.33e-10,1;UBERON:0009899,6.33e-10,1;UBERON:0004111,7.47e-10,240;UBERON:0001882,8.24e-10,1;UBERON:0005403,8.24e-10,1;UBERON:0007190,9.82e-10,1;UBERON:0000369,1.52e-09,4;UBERON:0002435,1.52e-09,4;UBERON:0000204,1.52e-09,4;UBERON:0010082,1.52e-09,4;UBERON:0002021,7.25e-08,5;UBERON:0000483,4.96e-07,306;UBERON:0000119,6.24e-07,309 | |||
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| ||
|short_description=p21@LMO3 | |||
}} | }} |
Latest revision as of 16:29, 17 September 2015
Short description: | p21@LMO3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_LMO3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 15bp_to_ENST00000447609, NM_001243610, uc001rdl.1_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | Q8TAP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data