FFCP PHASE1:Hg19::chr20:9494928..9494945,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:9494928..9494945,+
|short_description=p6@LAMP5
|description=CAGE_peak_6_at_LAMP5_5end
|association_with_transcript=-59bp_to_NM_001199897,NM_012261_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=24141 | |EntrezGene=24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |HGNC=16097 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |UniProt=Q9UJQ1 | ||
|association_with_transcript=-59bp_to_NM_001199897,NM_012261_5end | |||
|cluster_id=chr20:9494928..9494945,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_6_at_LAMP5_5end | |||
|id=chr20:9494928..9494945,+ | |||
|ontology_enrichment_celltype=CL:0000784!2.90e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.69e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.86e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.85e-14;82!UBERON:0010122;1.25e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.26e-61;32!UBERON:0002791;3.05e-57;32!UBERON:0003528;3.14e-57;34!UBERON:0002020;3.14e-57;34!UBERON:0001893;4.64e-57;34!UBERON:0002619;1.44e-51;22!UBERON:0002780;3.09e-45;41!UBERON:0001890;3.09e-45;41!UBERON:0000956;4.28e-45;25!UBERON:0000203;4.28e-45;25!UBERON:0001950;1.95e-44;20!UBERON:0000073;5.09e-37;53!UBERON:0002616;5.09e-37;53!UBERON:0002420;1.45e-28;9!UBERON:0007245;1.45e-28;9!UBERON:0010009;1.45e-28;9!UBERON:0010011;1.45e-28;9!UBERON:0000454;1.45e-28;9!UBERON:0000955;2.73e-27;68!UBERON:0001017;5.91e-25;75!UBERON:0000200;2.62e-23;6!UBERON:0000125;1.60e-21;9!UBERON:0002308;1.60e-21;9!UBERON:0000349;5.76e-21;5!UBERON:0001016;6.41e-21;83!UBERON:0009663;6.44e-21;7!UBERON:0001872;1.22e-18;5!UBERON:0000369;1.34e-17;4!UBERON:0002435;1.34e-17;4!UBERON:0000204;1.34e-17;4!UBERON:0001871;1.25e-14;6!UBERON:0005383;1.21e-13;3!UBERON:0005382;1.21e-13;3!UBERON:0001870;1.69e-12;3!UBERON:0002298;5.19e-10;6!UBERON:0007023;8.37e-10;114!UBERON:0001873;1.25e-09;2!UBERON:0001876;1.57e-09;2!UBERON:0001954;3.33e-09;2!UBERON:0003022;3.33e-09;2!UBERON:0002421;3.33e-09;2!UBERON:0002600;3.33e-09;2!UBERON:0002771;5.51e-09;2!UBERON:0002702;6.99e-09;2!UBERON:0001875;1.14e-08;2!UBERON:0006514;1.14e-08;2!UBERON:0011216;2.90e-08;132!UBERON:0004733;1.90e-07;12!UBERON:0002028;1.90e-07;12!UBERON:0004732;7.43e-07;13 | |||
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|short_description=p6@LAMP5 | |||
}} | }} |
Latest revision as of 17:27, 17 September 2015
Short description: | p6@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LAMP5_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -59bp_to_NM_001199897, NM_012261_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.86e-12 | 3 |