FFCP PHASE1:Hg19::chr5:34656551..34656562,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:34656551..34656562,+
|short_description=p8@RAI14
|description=CAGE_peak_8_at_RAI14_5end
|association_with_transcript=7bp_to_ENST00000512629_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26064 | |EntrezGene=26064 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14873 | |HGNC=14873 | ||
|TSSclassifier=strong | |||
|UniProt=E9PED3 | |UniProt=E9PED3 | ||
|association_with_transcript=7bp_to_ENST00000512629_5end | |||
|cluster_id=chr5:34656551..34656562,+ | |||
|coexpression_cluster_id=C4495 | |||
|description=CAGE_peak_8_at_RAI14_5end | |||
|id=chr5:34656551..34656562,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.37e-19!24;CL:0000222!1.10e-17!119;CL:0000115!7.47e-15!35;CL:0000071!7.82e-15!18;CL:0002546!7.82e-15!18;CL:0000055!2.33e-13!180;CL:0002078!5.60e-12!44;CL:0000213!6.54e-12!57;CL:0000215!6.54e-12!57;CL:0000057!5.42e-11!75;CL:0002321!1.05e-08!248;CL:0000220!1.63e-08!246;CL:1000413!3.61e-08!9;CL:0002620!5.47e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.76e-50;24!CL:0000071;5.02e-38;18!CL:0000115;7.93e-38;36!CL:0002078;7.40e-23;45!CL:1000413;1.06e-19;9!CL:0000213;2.94e-17;58!CL:0000215;2.94e-17;58!CL:0002544;6.98e-14;6!CL:0002543;9.63e-14;6!CL:0002138;1.82e-13;6!CL:0002618;4.61e-08;3!CL:0002144;7.83e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.85e-50,24;CL:0000115,1.33e-45,36;CL:0000071,3.79e-38,18;CL:0002546,3.79e-38,18;CL:0002078,1.52e-34,45;CL:0000213,1.85e-28,58;CL:0000215,1.85e-28,58;CL:0000222,3.84e-24,121;CL:1000413,9.79e-20,9;CL:0002544,6.73e-14,6;CL:0002543,6.87e-14,6;CL:0005020,1.45e-13,6;CL:0002138,1.45e-13,6;CL:0005022,1.45e-13,6;CL:0002321,1.15e-10,250;CL:0000076,5.06e-10,63;CL:0002618,4.73e-08,3;CL:0002144,8.96e-08,3;CL:0002188,9.32e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;5.02e-38;18!CL:0005022;1.82e-13;6!CL:0000222;1.46e-09;121 | |||
|ontology_enrichment_disease=DOID:2394!7.67e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!8.06e-23!79;UBERON:0007798!8.06e-23!79;UBERON:0000055!2.87e-18!69;UBERON:0004535!9.93e-18!110;UBERON:0004872!1.07e-17!84;UBERON:0001009!8.55e-17!113;UBERON:0001981!1.69e-16!60;UBERON:0007500!1.69e-16!60;UBERON:0004537!1.69e-16!60;UBERON:0006965!1.69e-16!60;UBERON:0001986!7.82e-15!18;UBERON:0004638!7.82e-15!18;UBERON:0004852!7.82e-15!18;UBERON:0003914!7.48e-14!118;UBERON:0000487!6.75e-12!22;UBERON:0006914!5.40e-11!25;UBERON:0001637!1.09e-10!42;UBERON:0003509!1.09e-10!42;UBERON:0004572!1.09e-10!42;UBERON:0000490!1.68e-10!138;UBERON:0000477!2.88e-10!286;UBERON:0000914!4.06e-09!83;UBERON:0002329!4.06e-09!83;UBERON:0003077!4.06e-09!83;UBERON:0003059!4.06e-09!83;UBERON:0007282!4.06e-09!83;UBERON:0009618!4.06e-09!83;UBERON:0007285!4.06e-09!83;UBERON:0004573!2.98e-08!33;UBERON:0004571!2.98e-08!33;UBERON:0003915!3.61e-08!9;UBERON:0004700!3.61e-08!9;UBERON:0001917!3.61e-08!9;UBERON:0000947!6.80e-08!21;UBERON:0010191!6.80e-08!21;UBERON:0000468!1.31e-07!659;UBERON:0000119!1.44e-07!312;UBERON:0000467!1.46e-07!625;UBERON:0004111!1.78e-07!241;UBERON:0004290!2.00e-07!70;UBERON:0000480!2.03e-07!626;UBERON:0000483!6.42e-07!309;UBERON:0000486!6.92e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.02e-38;18!UBERON:0001986;5.02e-38;18!UBERON:0004852;5.02e-38;18!UBERON:0000487;4.90e-30;22!UBERON:0006914;9.87e-26;25!UBERON:0003915;1.06e-19;9!UBERON:0004700;1.06e-19;9!UBERON:0001917;1.06e-19;9!UBERON:0000055;1.13e-18;65!UBERON:0000490;2.31e-18;33!UBERON:0007500;3.16e-17;56!UBERON:0001981;3.16e-17;56!UBERON:0004537;3.16e-17;56!UBERON:0002049;7.55e-17;75!UBERON:0007798;7.55e-17;75!UBERON:0001637;1.43e-12;42!UBERON:0003509;1.43e-12;42!UBERON:0004572;1.43e-12;42!UBERON:0000947;2.97e-12;21!UBERON:0010191;2.97e-12;21!UBERON:0001638;1.43e-11;9!UBERON:0003920;1.43e-11;9!UBERON:0004582;1.43e-11;9!UBERON:0004573;3.88e-11;33!UBERON:0004571;3.88e-11;33!UBERON:0004535;3.98e-11;109!UBERON:0003914;4.57e-11;74!UBERON:0001473;7.54e-10;8!UBERON:0004536;7.54e-10;8!UBERON:0006558;7.54e-10;8!UBERON:0001009;1.40e-09;112!UBERON:0010523;7.83e-08;3!UBERON:0001915;7.83e-08;3!UBERON:0001982;7.83e-08;3!UBERON:0002465;1.11e-07;10!UBERON:0002066;1.23e-07;5!UBERON:0000025;2.59e-07;93 | |||
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| ||
|short_description=p8@RAI14 | |||
}} | }} |
Latest revision as of 17:33, 17 September 2015
Short description: | p8@RAI14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RAI14_5end |
Coexpression cluster: | C4495_Endothelial_Lymphatic_Mast_gall_Iris_osteosarcoma_Lens |
Association with transcript: | 7bp_to_ENST00000512629_5end |
EntrezGene: | RAI14 |
HGNC: | 14873 |
UniProt: | E9PED3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.85e-50 | 24 |
endothelial cell | 1.33e-45 | 36 |
blood vessel endothelial cell | 3.79e-38 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.79e-38 | 18 |
meso-epithelial cell | 1.52e-34 | 45 |
lining cell | 1.85e-28 | 58 |
barrier cell | 1.85e-28 | 58 |
mesodermal cell | 3.84e-24 | 121 |
endothelial cell of artery | 9.79e-20 | 9 |
aortic endothelial cell | 6.73e-14 | 6 |
vein endothelial cell | 6.87e-14 | 6 |
lymphangioblast | 1.45e-13 | 6 |
endothelial cell of lymphatic vessel | 1.45e-13 | 6 |
vascular lymphangioblast | 1.45e-13 | 6 |
embryonic cell | 1.15e-10 | 250 |
squamous epithelial cell | 5.06e-10 | 63 |
endothelial cell of umbilical vein | 4.73e-08 | 3 |
capillary endothelial cell | 8.96e-08 | 3 |
glomerular endothelial cell | 9.32e-07 | 5 |