FFCP PHASE1:Hg19::chr3:197518355..197518387,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84859 | |EntrezGene=84859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28637 | |HGNC=28637 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=205bp_to_CU675675,DQ893268,DQ896598_5end | |association_with_transcript=205bp_to_CU675675,DQ893268,DQ896598_5end | ||
|cluster_id=chr3:197518355..197518387,+ | |||
|coexpression_cluster_id=C681 | |||
|description=CAGE_peak_2_at_LRCH3_5end | |description=CAGE_peak_2_at_LRCH3_5end | ||
|id=chr3:197518355..197518387,+ | |id=chr3:197518355..197518387,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.59e-17!140;CL:0002057!4.93e-16!42;CL:0002031!3.12e-15!124;CL:0000557!3.13e-14!71;CL:0000860!4.61e-14!45;CL:0000766!5.41e-14!76;CL:0002087!6.14e-14!119;CL:0000839!2.89e-13!70;CL:0002009!9.89e-13!65;CL:0002194!5.20e-12!63;CL:0000576!5.20e-12!63;CL:0000040!5.20e-12!63;CL:0000559!5.20e-12!63;CL:0000988!1.47e-11!182;CL:0002032!9.13e-11!165;CL:0000837!9.13e-11!165;CL:0000037!5.25e-10!172;CL:0000566!5.25e-10!172;CL:0000763!6.18e-08!112;CL:0000049!6.18e-08!112;CL:0000134!5.32e-07!358 | |ontology_enrichment_celltype=CL:0000738!3.59e-17!140;CL:0002057!4.93e-16!42;CL:0002031!3.12e-15!124;CL:0000557!3.13e-14!71;CL:0000860!4.61e-14!45;CL:0000766!5.41e-14!76;CL:0002087!6.14e-14!119;CL:0000839!2.89e-13!70;CL:0002009!9.89e-13!65;CL:0002194!5.20e-12!63;CL:0000576!5.20e-12!63;CL:0000040!5.20e-12!63;CL:0000559!5.20e-12!63;CL:0000988!1.47e-11!182;CL:0002032!9.13e-11!165;CL:0000837!9.13e-11!165;CL:0000037!5.25e-10!172;CL:0000566!5.25e-10!172;CL:0000763!6.18e-08!112;CL:0000049!6.18e-08!112;CL:0000134!5.32e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-23;33!CL:0002057;1.57e-23;33!CL:0000473;3.12e-20;39!CL:0000234;3.12e-20;39!CL:0000576;9.49e-12;48!CL:0000766;1.18e-10;69!CL:0002087;1.76e-08;104!CL:0000945;3.43e-08;24!CL:0000738;9.62e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.41e-26,136;CL:0002031,3.61e-23,120;CL:0000557,7.02e-23,67;CL:0000860,1.26e-22,42;CL:0002057,1.26e-22,42;CL:0000473,1.27e-22,48;CL:0000234,1.27e-22,48;CL:0000839,8.38e-22,66;CL:0000766,9.23e-22,72;CL:0002087,2.08e-20,115;CL:0000988,6.34e-20,177;CL:0002032,4.63e-19,161;CL:0000837,4.63e-19,161;CL:0002009,5.18e-19,61;CL:0002194,1.82e-18,59;CL:0000576,1.82e-18,59;CL:0000040,1.82e-18,59;CL:0000559,1.82e-18,59;CL:0000037,2.46e-18,168;CL:0000763,4.38e-15,108;CL:0000049,4.38e-15,108;CL:0000134,3.81e-09,354;CL:0002320,1.51e-08,361;CL:0000945,1.53e-08,24;CL:0000826,1.53e-08,24;CL:0000048,2.83e-08,427;CL:0000723,3.35e-08,433;CL:0000034,4.40e-08,441;CL:0000097,5.44e-07,5;CL:0002028,5.44e-07,5;CL:0000219,7.40e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.24e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.23e-22!112;UBERON:0002390!1.38e-19!102;UBERON:0003061!1.38e-19!102;UBERON:0002405!1.17e-14!115;UBERON:0002371!2.82e-14!80;UBERON:0001474!9.71e-12!86;UBERON:0003081!4.76e-10!216;UBERON:0004765!3.24e-09!101;UBERON:0001434!3.24e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.53e-28,108;UBERON:0002390,5.18e-26,98;UBERON:0003061,5.18e-26,98;UBERON:0002405,6.27e-23,93;UBERON:0002371,2.35e-22,76;UBERON:0001474,9.60e-20,82;UBERON:0004765,1.02e-17,90;UBERON:0003081,8.70e-16,203;UBERON:0001434,1.18e-14,100;UBERON:0002204,2.98e-09,167;UBERON:0000926,4.30e-09,315;UBERON:0004120,4.30e-09,315;UBERON:0006603,4.30e-09,315;UBERON:0002384,4.05e-08,371 | |||
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| ||
|short_description=p2@LRCH3 | |short_description=p2@LRCH3 | ||
}} | }} |
Latest revision as of 17:33, 17 September 2015
Short description: | p2@LRCH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRCH3_5end |
Coexpression cluster: | C681_immature_CD14_migratory_CD34_Eosinophils_Basophils_Dendritic |
Association with transcript: | 205bp_to_CU675675, DQ893268, DQ896598_5end |
EntrezGene: | LRCH3 |
HGNC: | 28637 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.53e-28 | 108 |
hematopoietic system | 5.18e-26 | 98 |
blood island | 5.18e-26 | 98 |
immune system | 6.27e-23 | 93 |
bone marrow | 2.35e-22 | 76 |
bone element | 9.60e-20 | 82 |
skeletal element | 1.02e-17 | 90 |
lateral plate mesoderm | 8.70e-16 | 203 |
skeletal system | 1.18e-14 | 100 |
musculoskeletal system | 2.98e-09 | 167 |
mesoderm | 4.30e-09 | 315 |
mesoderm-derived structure | 4.30e-09 | 315 |
presumptive mesoderm | 4.30e-09 | 315 |
connective tissue | 4.05e-08 | 371 |