FFCP PHASE1:Hg19::chr4:40058783..40058795,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=344967 | |EntrezGene=344967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000381811,NR_027277,uc011byr.1_5end | |association_with_transcript=23bp_to_ENST00000381811,NR_027277,uc011byr.1_5end | ||
|cluster_id=chr4:40058783..40058795,- | |||
|coexpression_cluster_id=C870 | |||
|description=CAGE_peak_3_at_LOC344967_5end | |description=CAGE_peak_3_at_LOC344967_5end | ||
|id=chr4:40058783..40058795,- | |id=chr4:40058783..40058795,- | ||
|ontology_enrichment_celltype=CL:0000766!1.09e-27!76;CL:0000860!1.19e-27!45;CL:0002057!1.94e-26!42;CL:0000557!8.15e-25!71;CL:0000839!4.68e-24!70;CL:0002009!1.89e-21!65;CL:0002194!2.57e-21!63;CL:0000576!2.57e-21!63;CL:0000040!2.57e-21!63;CL:0000559!2.57e-21!63;CL:0000763!2.30e-19!112;CL:0000049!2.30e-19!112;CL:0000738!8.26e-17!140;CL:0000988!1.11e-14!182;CL:0000037!1.18e-14!172;CL:0000566!1.18e-14!172;CL:0002031!8.14e-14!124;CL:0002032!8.85e-13!165;CL:0000837!8.85e-13!165;CL:0002087!1.08e-12!119;CL:0002393!7.70e-10!9;CL:0002397!7.70e-10!9;CL:0002371!7.41e-07!591 | |ontology_enrichment_celltype=CL:0000766!1.09e-27!76;CL:0000860!1.19e-27!45;CL:0002057!1.94e-26!42;CL:0000557!8.15e-25!71;CL:0000839!4.68e-24!70;CL:0002009!1.89e-21!65;CL:0002194!2.57e-21!63;CL:0000576!2.57e-21!63;CL:0000040!2.57e-21!63;CL:0000559!2.57e-21!63;CL:0000763!2.30e-19!112;CL:0000049!2.30e-19!112;CL:0000738!8.26e-17!140;CL:0000988!1.11e-14!182;CL:0000037!1.18e-14!172;CL:0000566!1.18e-14!172;CL:0002031!8.14e-14!124;CL:0002032!8.85e-13!165;CL:0000837!8.85e-13!165;CL:0002087!1.08e-12!119;CL:0002393!7.70e-10!9;CL:0002397!7.70e-10!9;CL:0002371!7.41e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.68e-14;48!CL:0000767;7.70e-14;3!CL:0000094;1.15e-13;8!CL:0000766;2.88e-13;69!CL:0002393;1.00e-12;6!CL:0002397;1.00e-12;6!CL:0000860;4.21e-12;33!CL:0002057;4.21e-12;33!CL:0000771;6.43e-10;2!CL:0000081;7.40e-10;11!CL:0000473;9.38e-09;39!CL:0000234;9.38e-09;39!CL:0000097;1.24e-08;5!CL:0000763;1.33e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.82e-32,72;CL:0000860,2.18e-26,42;CL:0002057,2.18e-26,42;CL:0000473,1.41e-22,48;CL:0000234,1.41e-22,48;CL:0000839,1.19e-21,66;CL:0000557,2.92e-21,67;CL:0000763,3.59e-21,108;CL:0000049,3.59e-21,108;CL:0000738,3.01e-20,136;CL:0002393,5.32e-18,9;CL:0002397,5.32e-18,9;CL:0000037,8.37e-18,168;CL:0002194,2.98e-17,59;CL:0000576,2.98e-17,59;CL:0000040,2.98e-17,59;CL:0000559,2.98e-17,59;CL:0002009,1.44e-16,61;CL:0000988,1.53e-16,177;CL:0002032,9.57e-15,161;CL:0000837,9.57e-15,161;CL:0000767,7.96e-14,3;CL:0000094,1.35e-13,8;CL:0002031,2.02e-12,120;CL:0002087,1.12e-11,115;CL:0000771,8.08e-10,2;CL:0000081,8.27e-10,11;CL:0000097,8.89e-09,5;CL:0002028,8.89e-09,5;CL:0000875,6.00e-07,3;CL:0002396,6.00e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.27e-22!80;UBERON:0002390!5.58e-21!102;UBERON:0003061!5.58e-21!102;UBERON:0001474!4.17e-20!86;UBERON:0002193!9.42e-20!112;UBERON:0002405!3.46e-17!115;UBERON:0004765!6.01e-15!101;UBERON:0001434!6.01e-15!101;UBERON:0003081!3.56e-14!216;UBERON:0002204!9.50e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.22e-20,76;UBERON:0001474,2.17e-18,82;UBERON:0002390,5.80e-18,98;UBERON:0003061,5.80e-18,98;UBERON:0004765,2.48e-16,90;UBERON:0002193,8.22e-16,108;UBERON:0002405,1.19e-15,93;UBERON:0001434,3.20e-14,100;UBERON:0003081,2.09e-13,203;UBERON:0002204,2.22e-08,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,1.57345710739562,1.15148819429164,5.88301268601089,0.919421224478927,1.50602959389125,0.369754010166788,0,0,1.17440175733939,3.87796785972314,3.00816671205213,16.4928261744047,0,0,0.257575567634187,0.436194716338694,0,0.970336244751265,0.929716147622738,0.411167888021826,0.619412741790207,1.7261543539329,0.768482119587302,1.6553756092201,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0.224723484445085,1.53041946185451,0.320929027076094,1.27867425159808,2.30895910130701,1.39624560335142,5.11469700639233,1.45104619314292,0,0.622822248995575,2.00998932205395,0,1.08594422352558,0.605399502633369,0.368277635987565,0.316462387440884,0.422510572623884,0.425208599930087,2.30624510059213,0.44931452458598,1.05123824989054,0.48217676009124,1.71007646244749,0.59675003159727,1.82664153764634,0,0,0,0,0,0,0,0,1.70763890732835,0,1.52909291250092,1.32171328579026,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0.398873881556595,0,0,0.371457501329565,0.39752481473341,0,0,1.13061588384802,0,0.550236083880135,1.25396979922086,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0.367663080345869,1.62028389576352,0,0,0.225222960966644,6.13266549863533,0,0.916008719652036,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0,0,0.67355336034844,0.163461903113459,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0.38474715694639,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0.743155811443641,0,0,0,0,0,0.383382679165211,0.492663237895943,0.616339038092582,1.65862492432618,2.16179930125442,2.5248486685276,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0.179060963239896,0.448340575974109,0,0.215627574859517,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0.413536052245775,1.94142780736755,1.06727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,1.54227252690289,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0.145016693914229,0,0,0,0.192190067365106,1.40373983744043,0.30347334256665,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,1.56989728039846,0,0,0,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,1.34060455107157,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0.423347165447766,0,0,0.228234679033192,0,0,0,0.481764225311099,0.403599414382095,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0.211125408127993,0.398495976502139,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.21787692703798,0,0.153900517007594,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,1.41282230755522,0.166211681900156,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0.290268993867255,0.219267951258557,0.0821154570532092,0,0.176512253383001,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0.77380195455795,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0.246277562248017,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,1.08803560673895,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0,0.276697269872462,0.37494122388632,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0,0,0.457680136793847,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.213383459388282,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0.606965604236632,0,0,0.115233987555779,0.171488009437418,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0.126166424835079,0.109265571963696,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0.560659312903067,0,0.202117188958219,0,0,0,0,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,1.57345710739562,1.15148819429164,5.88301268601089,0.919421224478927,1.50602959389125,0.369754010166788,0,0,1.17440175733939,3.87796785972314,3.00816671205213,16.4928261744047,0,0,0.257575567634187,0.436194716338694,0,0.970336244751265,0.929716147622738,0.411167888021826,0.619412741790207,1.7261543539329,0.768482119587302,1.6553756092201,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0.224723484445085,1.53041946185451,0.320929027076094,1.27867425159808,2.30895910130701,1.39624560335142,5.11469700639233,1.45104619314292,0,0.622822248995575,2.00998932205395,0,1.08594422352558,0.605399502633369,0.368277635987565,0.316462387440884,0.422510572623884,0.425208599930087,2.30624510059213,0.44931452458598,1.05123824989054,0.48217676009124,1.71007646244749,0.59675003159727,1.82664153764634,0,0,0,0,0,0,0,0,1.70763890732835,0,1.52909291250092,1.32171328579026,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0.398873881556595,0,0,0.371457501329565,0.39752481473341,0,0,1.13061588384802,0,0.550236083880135,1.25396979922086,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0.367663080345869,1.62028389576352,0,0,0.225222960966644,6.13266549863533,0,0.916008719652036,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0,0,0.67355336034844,0.163461903113459,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0.38474715694639,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0.743155811443641,0,0,0,0,0,0.383382679165211,0.492663237895943,0.616339038092582,1.65862492432618,2.16179930125442,2.5248486685276,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0.179060963239896,0.448340575974109,0,0.215627574859517,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0.413536052245775,1.94142780736755,1.06727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,1.54227252690289,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0.145016693914229,0,0,0,0.192190067365106,1.40373983744043,0.30347334256665,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,1.56989728039846,0,0,0,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,1.34060455107157,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0.423347165447766,0,0,0.228234679033192,0,0,0,0.481764225311099,0.403599414382095,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0.211125408127993,0.398495976502139,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.21787692703798,0,0.153900517007594,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,1.41282230755522,0.166211681900156,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0.290268993867255,0.219267951258557,0.0821154570532092,0,0.176512253383001,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0.77380195455795,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0.246277562248017,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,1.08803560673895,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0,0.276697269872462,0.37494122388632,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0,0,0.457680136793847,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.213383459388282,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0.606965604236632,0,0,0.115233987555779,0.171488009437418,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0.126166424835079,0.109265571963696,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0.560659312903067,0,0.202117188958219,0,0,0,0,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p3@LOC344967 | |short_description=p3@LOC344967 | ||
}} | }} |
Latest revision as of 17:51, 17 September 2015
Short description: | p3@LOC344967 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC344967_5end |
Coexpression cluster: | C870_CD14_Mast_Basophils_Peripheral_Eosinophils_Endothelial_Natural |
Association with transcript: | 23bp_to_ENST00000381811, NR_027277, uc011byr.1_5end |
EntrezGene: | LOC344967 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.22e-20 | 76 |
bone element | 2.17e-18 | 82 |
hematopoietic system | 5.80e-18 | 98 |
blood island | 5.80e-18 | 98 |
skeletal element | 2.48e-16 | 90 |
hemolymphoid system | 8.22e-16 | 108 |
immune system | 1.19e-15 | 93 |
skeletal system | 3.20e-14 | 100 |
lateral plate mesoderm | 2.09e-13 | 203 |
musculoskeletal system | 2.22e-08 | 167 |