FFCP PHASE1:Hg19::chr17:75315696..75315710,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UHD8 | |||
|association_with_transcript=99bp_to_ENST00000329047,NM_006640,uc002jtu.3_5end | |||
|cluster_id=chr17:75315696..75315710,+ | |||
|coexpression_cluster_id=C3686 | |||
|description=CAGE_peak_19_at_SEPT9_5end | |||
|id=chr17:75315696..75315710,+ | |||
|ontology_enrichment_celltype=CL:0002320!1.29e-13!365;CL:0000134!2.96e-13!358;CL:0002009!2.98e-13!65;CL:0000557!5.20e-13!71;CL:0002194!3.15e-12!63;CL:0000576!3.15e-12!63;CL:0000040!3.15e-12!63;CL:0000559!3.15e-12!63;CL:0000860!5.15e-12!45;CL:0000048!9.10e-12!430;CL:0000763!1.97e-11!112;CL:0000049!1.97e-11!112;CL:0000723!3.21e-11!436;CL:0002057!4.64e-11!42;CL:0000839!9.05e-11!70;CL:0000219!9.60e-11!390;CL:0000034!3.70e-10!444;CL:0000766!2.37e-09!76;CL:0000057!3.55e-08!75;CL:0002620!1.39e-07!23;CL:0000012!2.60e-07!682;CL:0000548!2.97e-07!679;CL:0000004!2.97e-07!679;CL:0000255!2.97e-07!679;CL:0000063!3.57e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.99e-18;33!CL:0002057;6.99e-18;33!CL:0000473;3.84e-15;39!CL:0000234;3.84e-15;39!CL:0000576;3.54e-09;48!CL:0002620;6.79e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.29e-17,61;CL:0000557,4.84e-17,67;CL:0002194,6.33e-16,59;CL:0000576,6.33e-16,59;CL:0000040,6.33e-16,59;CL:0000559,6.33e-16,59;CL:0000473,7.33e-16,48;CL:0000234,7.33e-16,48;CL:0000860,8.94e-16,42;CL:0002057,8.94e-16,42;CL:0000839,1.90e-14,66;CL:0000763,6.55e-14,108;CL:0000049,6.55e-14,108;CL:0002320,1.90e-12,361;CL:0000134,2.48e-12,354;CL:0000766,5.41e-12,72;CL:0000048,2.58e-10,427;CL:0000723,7.43e-10,433;CL:0000219,1.90e-09,386;CL:0000034,3.20e-09,441;CL:0000988,8.26e-08,177;CL:0002620,8.81e-08,23;CL:0002032,1.01e-07,161;CL:0000837,1.01e-07,161;CL:0000037,6.00e-07,168;CL:0002031,6.50e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;5.42e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.83e-15!375;UBERON:0002371!1.04e-14!80;UBERON:0001474!2.83e-14!86;UBERON:0004765!2.04e-12!101;UBERON:0001434!2.04e-12!101;UBERON:0002204!1.57e-10!167;UBERON:0002390!6.56e-10!102;UBERON:0003061!6.56e-10!102;UBERON:0000926!1.22e-09!448;UBERON:0004120!1.22e-09!448;UBERON:0006603!1.22e-09!448;UBERON:0002193!1.71e-09!112;UBERON:0002405!5.18e-09!115;UBERON:0003081!4.43e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.37e-08;9!UBERON:0001557;6.37e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.52e-19,76;UBERON:0001474,1.15e-18,82;UBERON:0004765,7.97e-16,90;UBERON:0002405,1.34e-15,93;UBERON:0001434,9.82e-14,100;UBERON:0002384,2.08e-13,371;UBERON:0002390,3.52e-12,98;UBERON:0003061,3.52e-12,98;UBERON:0002193,1.72e-11,108;UBERON:0002204,5.12e-09,167;UBERON:0003081,5.26e-09,203;UBERON:0001737,6.30e-08,9 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,1.0007329835313,0,0.872338524100369,0,4.42203911398782,0,0.245733936501509,2.79120467188971,6.334799791775,8.44054330331051,0,0.662794751455832,1.34465029290355,0,0.730310090387373,1.46379839637152,0.246242116153576,0.612002073732759,0.626909442956176,0,0,0.502170558379211,2.29240217243854,1.55991119954897,2.44003422072406,0,0.383829398097213,0.77408061658038,0.919421224478927,0,0,0,0,1.17440175733939,2.76997704265939,1.80490002723128,1.30206522429511,0.223915474239924,0.647787332037959,0.77272670290256,1.45398238779565,3.40088349319928,5.33684934613196,2.32429036905685,6.16751832032739,3.09706370895104,5.46615545412086,8.96562472851852,6.3850202069918,1.03423704220986,4.51839278508678,2.70852973188684,1.69418105588344,3.0019676506363,4.49446968890169,3.06083892370903,6.73950956859797,5.11469700639233,6.26717470354761,11.5688921420546,11.9342930149154,3.19230162491442,11.3477044938228,18.6846674698673,5.27622197039161,3.12889751052121,4.12658804939722,0.605399502633369,3.68277635987565,3.48108626184973,0,0,0.419317291016752,0.112328631146495,0.300353785683013,0,0,0,0,0,1.09227722252426,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,1.44575660953827,0.50133791063589,0.289693037921647,0,1.94653948121054,0.189069634328136,0,0,0.196468613246569,1.45718115317017,1.48313777113772,1.29818957461873,2.08955684759121,2.26028532882071,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0,0,0.402829317109147,0,0.732186172644509,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.872188104285069,1.49091585508596,0.759783069987479,0.529636723252875,0.286836620748814,0.354668382198357,1.68203280042692,2.1349799145941,0.24666754841716,0.311211035399766,0.67355336034844,0.490385709340376,0.756787138224657,1.72852777344,1.17160715916898,1.24864030732128,1.1409436430889,1.64393548606981,1.29177948508141,3.0755859429945,2.10676210053373,3.0623125688234,1.47401180774122,1.13658359293342,0,0.247266929278557,4.55080680969013,5.03032699271367,0.841680569770331,1.25118519871964,3.3247693858102,0.877955241761676,0.919463387397059,0.300476117813194,0.567160915800105,2.87023417102179,0.427114777637135,1.05965950579781,4.50136644126603,0.721367704669072,1.54584324027377,2.60563598864226,3.71307930930786,1.36411807225678,3.28163906517349,0.828449087780694,0.646584227275248,3.90510551768276,2.31729825923573,3.05209066158878,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0,3.785817601275,2.52877035117153,2.41011029883482,2.31617342738027,3.7039505495709,3.08451804844426,4.1797705529651,3.72820783738158,5.77120735419586,0.738155454624648,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0.491953754172454,0,0.439001141634502,0,1.00528972411631,0.277765335475589,0.651616610620649,3.11980435583874,0,0,0.234817388471643,0,0.462985512576611,0,0,0,2.70838706696137,1.63802985597466,1.33768046059855,0,0.16798212819886,0.141775097242386,0.447792613514241,0.581267877027924,3.06706143332169,0,0,0.829312462163088,1.72943944100354,3.02981840223312,0.444485260045183,1.90994212779139,0,0,0.719792448923265,0.300343057843917,0.285826432630578,4.26098120512371,1.74384027533312,2.4935017179123,0.904902010304444,0,3.381211010224,0.797814349754612,6.24044621468197,1.80045161983499,9.92943924162948,1.8649552531127,0.57191197463259,0,2.46972101034231,2.93162565864362,0,2.37585561880029,0,0,0,0,1.00451418286425,0,2.39624855491583,1.14861935834114,0,5.06734573336527,1.2328579353023,1.96967059563885,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0.12269149171914,1.00034104211935,0.542530047399471,1.03985430765404,0.713715955188647,0.946214490203608,0.702848489956279,1.20378439891088,0,0,1.99267679560631,1.29058417979192,1.04260337361699,3.91602314925481,1.02943027143257,0.620304078368662,0.647142602455851,0.853820462427555,5.15316871458641,1.66435439510497,2.72151263996712,0,0.61384789315225,0.561320188866147,0.768834895534206,0,0.482561763430822,0,1.3878872442239,0.532685175939381,1.39616165223476,1.55776328755086,2.44041794765914,0.120859449591622,0.200506470303285,0.0920809889358963,0.918515585316854,1.0925470080403,0.524497659837696,0.451199612907412,0.15403067420883,0,0,0,1.13733384070897,2.55140557914773,0.431831832204279,0,1.62567862526312,1.50506932156456,0.254876273045038,0,0.447749509444357,0,0,0,0.328014645699706,0,0.824328093181778,3.75434805755208,3.96045599618822,0,0,3.21367859688319,0.193341436584244,1.3864375540318,0.307007349452259,0.964856007391714,0.214840489736547,0.435050081742686,0.426133137080504,0,0,0,0.127612712494584,0,0.929691098594572,0.31481234683064,0,0.308033580176089,1.59691809095107,1.73986598415015,0.9266210955196,1.5743737541619,0,0,0,0.511795582622668,0,2.54562598340749,2.35484592059769,0.359744915166629,0.54907405947211,0.942499218765491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| |||
|short_description=p19@SEPT9 | |||
}} |
Latest revision as of 18:18, 17 September 2015
Short description: | p19@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SEPT9_5end |
Coexpression cluster: | C3686_CD14_Mesenchymal_liposarcoma_renal_amniotic_anaplastic_immature |
Association with transcript: | 99bp_to_ENST00000329047, NM_006640, uc002jtu.3_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.29e-17 | 61 |
granulocyte monocyte progenitor cell | 4.84e-17 | 67 |
monopoietic cell | 6.33e-16 | 59 |
monocyte | 6.33e-16 | 59 |
monoblast | 6.33e-16 | 59 |
promonocyte | 6.33e-16 | 59 |
defensive cell | 7.33e-16 | 48 |
phagocyte | 7.33e-16 | 48 |
classical monocyte | 8.94e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.94e-16 | 42 |
myeloid lineage restricted progenitor cell | 1.90e-14 | 66 |
myeloid cell | 6.55e-14 | 108 |
common myeloid progenitor | 6.55e-14 | 108 |
connective tissue cell | 1.90e-12 | 361 |
mesenchymal cell | 2.48e-12 | 354 |
myeloid leukocyte | 5.41e-12 | 72 |
multi fate stem cell | 2.58e-10 | 427 |
somatic stem cell | 7.43e-10 | 433 |
motile cell | 1.90e-09 | 386 |
stem cell | 3.20e-09 | 441 |
hematopoietic cell | 8.26e-08 | 177 |
skin fibroblast | 8.81e-08 | 23 |
hematopoietic oligopotent progenitor cell | 1.01e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-07 | 161 |
hematopoietic stem cell | 6.00e-07 | 168 |
hematopoietic lineage restricted progenitor cell | 6.50e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.52e-19 | 76 |
bone element | 1.15e-18 | 82 |
skeletal element | 7.97e-16 | 90 |
immune system | 1.34e-15 | 93 |
skeletal system | 9.82e-14 | 100 |
connective tissue | 2.08e-13 | 371 |
hematopoietic system | 3.52e-12 | 98 |
blood island | 3.52e-12 | 98 |
hemolymphoid system | 1.72e-11 | 108 |
musculoskeletal system | 5.12e-09 | 167 |
lateral plate mesoderm | 5.26e-09 | 203 |
larynx | 6.30e-08 | 9 |