FFCP PHASE1:Hg19::chr10:27444113..27444140,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:27444113..27444140,-
|short_description=p3@YME1L1
|description=CAGE_peak_3_at_YME1L1_5end
|association_with_transcript=54bp_to_ENST00000477432_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10730 | |EntrezGene=10730 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12843 | |HGNC=12843 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_ENST00000477432_5end | |||
|cluster_id=chr10:27444113..27444140,- | |||
|coexpression_cluster_id=C290 | |||
|description=CAGE_peak_3_at_YME1L1_5end | |||
|id=chr10:27444113..27444140,- | |||
|ontology_enrichment_celltype=CL:0000738!2.83e-32!140;CL:0002057!3.52e-25!42;CL:0000037!4.33e-25!172;CL:0000566!4.33e-25!172;CL:0002087!4.61e-25!119;CL:0002031!2.02e-24!124;CL:0000860!1.46e-23!45;CL:0000988!2.65e-23!182;CL:0002032!2.70e-22!165;CL:0000837!2.70e-22!165;CL:0000766!2.99e-19!76;CL:0000557!5.34e-16!71;CL:0002009!2.58e-15!65;CL:0002194!2.04e-14!63;CL:0000576!2.04e-14!63;CL:0000040!2.04e-14!63;CL:0000559!2.04e-14!63;CL:0000134!3.14e-14!358;CL:0000839!7.28e-14!70;CL:0002320!2.39e-13!365;CL:0000763!1.18e-12!112;CL:0000049!1.18e-12!112;CL:0000219!2.02e-12!390;CL:0000034!1.55e-11!444;CL:0000048!2.06e-11!430;CL:0000003!2.25e-11!722;CL:0000723!7.89e-11!436;CL:0000063!3.78e-10!578;CL:0000838!7.08e-10!52;CL:0000542!9.75e-10!53;CL:0000051!9.75e-10!53;CL:0000012!8.07e-09!682;CL:0000144!3.21e-08!625;CL:0000548!7.09e-08!679;CL:0000004!7.09e-08!679;CL:0000255!7.09e-08!679;CL:0002371!8.17e-08!591;CL:0000945!9.34e-08!24;CL:0000826!9.34e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.28e-22;33!CL:0002057;3.28e-22;33!CL:0000473;6.75e-16;39!CL:0000234;6.75e-16;39!CL:0000576;1.07e-14;48!CL:0000766;5.01e-13;69!CL:0002087;1.11e-10;104!CL:0000738;1.83e-08;136!CL:0000945;3.71e-08;24!CL:0000094;3.63e-07;8!CL:0000542;6.95e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.88e-38,136;CL:0002087,3.00e-30,115;CL:0002031,6.83e-30,120;CL:0000860,2.41e-29,42;CL:0002057,2.41e-29,42;CL:0000037,6.25e-29,168;CL:0000988,1.92e-26,177;CL:0002032,1.21e-25,161;CL:0000837,1.21e-25,161;CL:0000473,5.36e-25,48;CL:0000234,5.36e-25,48;CL:0000766,2.14e-24,72;CL:0000557,2.20e-20,67;CL:0002009,6.94e-20,61;CL:0002194,8.88e-19,59;CL:0000576,8.88e-19,59;CL:0000040,8.88e-19,59;CL:0000559,8.88e-19,59;CL:0000839,6.14e-18,66;CL:0000134,1.14e-17,354;CL:0002320,2.08e-16,361;CL:0000034,1.37e-15,441;CL:0000219,2.94e-15,386;CL:0000048,3.73e-15,427;CL:0000763,5.55e-15,108;CL:0000049,5.55e-15,108;CL:0000723,1.33e-14,433;CL:0000838,6.06e-11,52;CL:0000542,1.96e-10,53;CL:0000051,1.96e-10,53;CL:0000945,1.82e-08,24;CL:0000826,1.82e-08,24;CL:0000094,4.51e-07,8;CL:0002393,8.23e-07,9;CL:0002397,8.23e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-21;42!CL:0000051;6.95e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.14e-14!80;UBERON:0001474!1.41e-13!86;UBERON:0002390!2.86e-13!102;UBERON:0003061!2.86e-13!102;UBERON:0002384!1.40e-12!375;UBERON:0002193!2.20e-12!112;UBERON:0004765!1.81e-10!101;UBERON:0001434!1.81e-10!101;UBERON:0002405!2.60e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.57e-19,76;UBERON:0001474,2.45e-17,82;UBERON:0002390,3.45e-17,98;UBERON:0003061,3.45e-17,98;UBERON:0002405,1.76e-16,93;UBERON:0002193,6.25e-16,108;UBERON:0002384,1.52e-15,371;UBERON:0004765,3.75e-15,90;UBERON:0001434,1.60e-12,100;UBERON:0002204,5.75e-07,167;UBERON:0003081,9.11e-07,203 | |||
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| ||
|short_description=p3@YME1L1 | |||
}} | }} |
Latest revision as of 18:49, 17 September 2015
Short description: | p3@YME1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_YME1L1_5end |
Coexpression cluster: | C290_Eosinophils_CD14_Basophils_Mast_CD4_CD8_immature |
Association with transcript: | 54bp_to_ENST00000477432_5end |
EntrezGene: | YME1L1 |
HGNC: | 12843 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.57e-19 | 76 |
bone element | 2.45e-17 | 82 |
hematopoietic system | 3.45e-17 | 98 |
blood island | 3.45e-17 | 98 |
immune system | 1.76e-16 | 93 |
hemolymphoid system | 6.25e-16 | 108 |
connective tissue | 1.52e-15 | 371 |
skeletal element | 3.75e-15 | 90 |
skeletal system | 1.60e-12 | 100 |
musculoskeletal system | 5.75e-07 | 167 |
lateral plate mesoderm | 9.11e-07 | 203 |