FFCP PHASE1:Hg19::chr4:40631779..40631790,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54502 | |EntrezGene=54502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30358 | |HGNC=30358 | ||
|TSSclassifier=strong | |||
|UniProt=A0AV96,D6R9D6 | |UniProt=A0AV96,D6R9D6 | ||
|association_with_transcript=90bp_to_ENST00000295971,ENST00000510871_5end | |association_with_transcript=90bp_to_ENST00000295971,ENST00000510871_5end | ||
|cluster_id=chr4:40631779..40631790,- | |||
|coexpression_cluster_id=C4411 | |coexpression_cluster_id=C4411 | ||
|description=CAGE_peak_9_at_RBM47_5end | |description=CAGE_peak_9_at_RBM47_5end | ||
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|ontology_enrichment_celltype=CL:0000766!7.39e-35!76;CL:0002009!1.81e-33!65;CL:0002194!2.72e-32!63;CL:0000576!2.72e-32!63;CL:0000040!2.72e-32!63;CL:0000559!2.72e-32!63;CL:0000557!9.56e-32!71;CL:0000839!1.04e-29!70;CL:0002057!6.09e-28!42;CL:0000860!3.51e-27!45;CL:0000763!1.25e-20!112;CL:0000049!1.25e-20!112;CL:0000738!1.67e-15!140;CL:0002031!4.97e-12!124;CL:0002087!6.47e-12!119;CL:0002032!3.28e-09!165;CL:0000837!3.28e-09!165;CL:0000037!8.00e-09!172;CL:0000566!8.00e-09!172;CL:0000988!3.36e-07!182 | |ontology_enrichment_celltype=CL:0000766!7.39e-35!76;CL:0002009!1.81e-33!65;CL:0002194!2.72e-32!63;CL:0000576!2.72e-32!63;CL:0000040!2.72e-32!63;CL:0000559!2.72e-32!63;CL:0000557!9.56e-32!71;CL:0000839!1.04e-29!70;CL:0002057!6.09e-28!42;CL:0000860!3.51e-27!45;CL:0000763!1.25e-20!112;CL:0000049!1.25e-20!112;CL:0000738!1.67e-15!140;CL:0002031!4.97e-12!124;CL:0002087!6.47e-12!119;CL:0002032!3.28e-09!165;CL:0000837!3.28e-09!165;CL:0000037!8.00e-09!172;CL:0000566!8.00e-09!172;CL:0000988!3.36e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.73e-44;33!CL:0002057;2.73e-44;33!CL:0000473;2.82e-43;39!CL:0000234;2.82e-43;39!CL:0000576;6.97e-31;48!CL:0000766;1.42e-23;69!CL:0000763;2.22e-12;100!CL:0000235;3.00e-09;6!CL:0000738;3.18e-08;136!CL:0000990;2.98e-07;8!CL:0000094;7.63e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;2.73e-44;33!CL:0002057;2.73e-44;33!CL:0000473;2.82e-43;39!CL:0000234;2.82e-43;39!CL:0000576;6.97e-31;48!CL:0000766;1.42e-23;69!CL:0000763;2.22e-12;100!CL:0000235;3.00e-09;6!CL:0000738;3.18e-08;136!CL:0000990;2.98e-07;8!CL:0000094;7.63e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.80e-58,61;CL:0000766,2.72e-56,72;CL:0002194,6.25e-56,59;CL:0000576,6.25e-56,59;CL:0000040,6.25e-56,59;CL:0000559,6.25e-56,59;CL:0000473,1.08e-52,48;CL:0000234,1.08e-52,48;CL:0000557,1.52e-51,67;CL:0000839,2.88e-48,66;CL:0000860,8.84e-45,42;CL:0002057,8.84e-45,42;CL:0000763,3.65e-40,108;CL:0000049,3.65e-40,108;CL:0000738,9.73e-27,136;CL:0002087,6.08e-22,115;CL:0002031,1.66e-21,120;CL:0002032,1.07e-20,161;CL:0000837,1.07e-20,161;CL:0000037,6.69e-20,168;CL:0000988,5.75e-18,177;CL:0000235,3.50e-09,6;CL:0000990,1.86e-07,8;CL:0000094,6.17e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-32;42!CL:0000049;7.93e-12;108 | |ontology_enrichment_development_v019=CL:0002057;1.17e-32;42!CL:0000049;7.93e-12;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.83e-30!102;UBERON:0003061!1.83e-30!102;UBERON:0002193!1.83e-26!112;UBERON:0002371!3.91e-26!80;UBERON:0001474!1.98e-23!86;UBERON:0002405!2.14e-20!115;UBERON:0004765!1.41e-17!101;UBERON:0001434!1.41e-17!101;UBERON:0000062!6.38e-10!511;UBERON:0000922!3.96e-08!612;UBERON:0000467!4.90e-08!625;UBERON:0000480!6.61e-08!626;UBERON:0000923!1.01e-07!604;UBERON:0005291!1.01e-07!604;UBERON:0006598!1.01e-07!604;UBERON:0002532!1.01e-07!604;UBERON:0002050!1.35e-07!605;UBERON:0005423!1.35e-07!605;UBERON:0003081!2.27e-07!216;UBERON:0000926!2.59e-07!448;UBERON:0004120!2.59e-07!448;UBERON:0006603!2.59e-07!448;UBERON:0000468!2.61e-07!659 | |ontology_enrichment_uberon=UBERON:0002390!1.83e-30!102;UBERON:0003061!1.83e-30!102;UBERON:0002193!1.83e-26!112;UBERON:0002371!3.91e-26!80;UBERON:0001474!1.98e-23!86;UBERON:0002405!2.14e-20!115;UBERON:0004765!1.41e-17!101;UBERON:0001434!1.41e-17!101;UBERON:0000062!6.38e-10!511;UBERON:0000922!3.96e-08!612;UBERON:0000467!4.90e-08!625;UBERON:0000480!6.61e-08!626;UBERON:0000923!1.01e-07!604;UBERON:0005291!1.01e-07!604;UBERON:0006598!1.01e-07!604;UBERON:0002532!1.01e-07!604;UBERON:0002050!1.35e-07!605;UBERON:0005423!1.35e-07!605;UBERON:0003081!2.27e-07!216;UBERON:0000926!2.59e-07!448;UBERON:0004120!2.59e-07!448;UBERON:0006603!2.59e-07!448;UBERON:0000468!2.61e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.21e-08;15!UBERON:0000179;1.21e-08;15!UBERON:0000463;1.21e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.21e-08;15!UBERON:0000179;1.21e-08;15!UBERON:0000463;1.21e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.33e-48,98;UBERON:0003061,4.33e-48,98;UBERON:0002371,1.94e-43,76;UBERON:0002193,2.59e-43,108;UBERON:0001474,6.33e-41,82;UBERON:0004765,9.02e-36,90;UBERON:0002405,2.78e-35,93;UBERON:0001434,1.65e-30,100;UBERON:0003081,1.59e-16,203;UBERON:0002204,1.19e-12,167;UBERON:0000926,1.12e-08,315;UBERON:0004120,1.12e-08,315;UBERON:0006603,1.12e-08,315;UBERON:0000178,1.42e-08,15;UBERON:0000179,1.42e-08,15;UBERON:0000463,1.42e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.491467873003018,0,0,0,0,0,0,0.602694528023977,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0,0.764134057479513,0.410502947249729,0.550975469195755,1.57345710739562,0.383829398097213,1.23852898652861,0,0.30120591877825,1.10926203050036,0,0,0,0.553995408531877,1.20326668482085,0.868043482863407,5.82180233023803,2.59114932815184,8.24241816429397,2.76256653681173,3.02300754951048,4.60909716256851,2.09186133215116,4.52284676824008,4.33588919253145,5.75384784644301,4.86705342405291,10.4052181150977,2.06847408441971,1.93645405075148,5.41705946377367,3.38836211176688,4.09359225086769,4.04502272001152,2.14258724659632,6.41858054152187,6.39337125799041,8.57613380485462,6.78176435913548,8.09827026012119,1.16083695451434,2.26954089876456,2.4912889959823,4.27122730936464,6.25779502104242,8.47036494349955,2.42159801053347,5.15588690382591,3.16462387440884,2.11255286311942,0.850417199860174,1.04829322754188,1.57260083605093,1.35159203557356,1.6072558669708,1.42506371870624,0.79566670879636,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,1.13441780596881,0.443458794925128,0.614843499851882,1.70272798147026,0.364295288292542,0,2.92092654289215,2.61194605948901,2.26028532882071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,0,0,0.529636723252875,0,0,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0.600182192168805,0.103052529238439,0,0,0.337552664482532,0,0,0.184099797284599,0.161646056818812,0.710019185033229,0.302256294682921,0,0.57978255948989,0.545492241181669,0.286804595389004,0,0.132529768321485,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,2.53510069643662,1.96565443335525,0.590789906681404,0,0.245976877086227,0.343135620597051,0.109750285408626,0,0.100528972411631,0.462942225792648,0,0,1.44331342025273,0.231860809950154,0.234817388471643,0,0,0,0.790204397959275,0,4.43190610957315,2.80805118167085,2.97262324577457,0,0.503946384596579,0.425325291727159,0,0,0,0.985326475791887,0,0,0.576479813667846,0.88369703398466,0,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,2.71295439353627,0,1.49959486773086,2.43247561282381,1.00451418286425,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,2.99602809578873,0,4.14415513436035,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,1.24060815673732,0.431428401637234,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.736647911487171,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0,0,1.28225062558195,1.31205858279882,0.325378394664303,2.67906630284078,0,0,0.574265537996172,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0.214840489736547,0,0,0,0.826424576804891,0.384380134730212,1.02090169995667,0.809262246844399,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0.354761064070598,0,0,0,0,0.48111056362756,0,0,1.88287601553558,0,1.68471475667626,0,0.229723400206959,6.08937131078603,2.29391162142713,1.13929437434833,2.38231775457789,1.64544909234478,4.53931317834902,3.24018862342869,2.37937552888281,0.427296284509893,0,0.490080431962063,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,1.1241165257259,0.201799707191048,2.12923118845163,0,0.921722292925374,1.11838053946208,0.333698283423817,0,0,0,0,0,0,0.561421621224659,0.879049075631364,0,0,0.284136146806413,0,0,0,0,0,0.333926115068718,0,0,1.39473591775749,0.276283915531148,0.755798243562828,0.818149460017238,0.369254416383208,0,0.808815160325942,3.9384658428634,0,0.295930216910801,2.3948309234694,0,0,0,0,1.04171104434093,2.27395999990109,1.44999915086959,0.227586896570999,1.27126825146383,3.54581522651905,0,0,0,0,0,0,0,0,0,0.10893846351899,1.11538995422883,0.384751292518985,0.797594390929008,1.84451123510448,2.06442582142476,3.47671590150426,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.816164040795739,1.13082457147153,0,0,0.619202951523374,0.611030144933625,0,0,0,0.471807930864739,0,0,0,0.978323094660449,0.971121518136371,3.55125962564451,0,0,1.13735843331278,0.300646838828985,0,0,0,0,0,0.853828638089378,0,0.694238953340524,1.07791637155815,0.34823682632161,0.698906672968121,0,0.290268993867255,0.0730893170861856,0.0821154570532092,0.969890164884194,2.55942767405351,0.90392296312213,0,0,0.126621591911757,3.71547627196126,0.961905843018405,0,0.5994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| 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| ||
|short_description=p9@RBM47 | |short_description=p9@RBM47 | ||
}} | }} |
Latest revision as of 18:50, 17 September 2015
Short description: | p9@RBM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RBM47_5end |
Coexpression cluster: | C4411_pancreatic_salivary_CD14_parotid_submaxillary_choriocarcinoma_seminal |
Association with transcript: | 90bp_to_ENST00000295971, ENST00000510871_5end |
EntrezGene: | RBM47 |
HGNC: | 30358 |
UniProt: | A0AV96D6R9D6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.80e-58 | 61 |
myeloid leukocyte | 2.72e-56 | 72 |
monopoietic cell | 6.25e-56 | 59 |
monocyte | 6.25e-56 | 59 |
monoblast | 6.25e-56 | 59 |
promonocyte | 6.25e-56 | 59 |
defensive cell | 1.08e-52 | 48 |
phagocyte | 1.08e-52 | 48 |
granulocyte monocyte progenitor cell | 1.52e-51 | 67 |
myeloid lineage restricted progenitor cell | 2.88e-48 | 66 |
classical monocyte | 8.84e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.84e-45 | 42 |
myeloid cell | 3.65e-40 | 108 |
common myeloid progenitor | 3.65e-40 | 108 |
leukocyte | 9.73e-27 | 136 |
nongranular leukocyte | 6.08e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.66e-21 | 120 |
hematopoietic oligopotent progenitor cell | 1.07e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-20 | 161 |
hematopoietic stem cell | 6.69e-20 | 168 |
hematopoietic cell | 5.75e-18 | 177 |
macrophage | 3.50e-09 | 6 |
conventional dendritic cell | 1.86e-07 | 8 |
granulocyte | 6.17e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.33e-48 | 98 |
blood island | 4.33e-48 | 98 |
bone marrow | 1.94e-43 | 76 |
hemolymphoid system | 2.59e-43 | 108 |
bone element | 6.33e-41 | 82 |
skeletal element | 9.02e-36 | 90 |
immune system | 2.78e-35 | 93 |
skeletal system | 1.65e-30 | 100 |
lateral plate mesoderm | 1.59e-16 | 203 |
musculoskeletal system | 1.19e-12 | 167 |
mesoderm | 1.12e-08 | 315 |
mesoderm-derived structure | 1.12e-08 | 315 |
presumptive mesoderm | 1.12e-08 | 315 |
blood | 1.42e-08 | 15 |
haemolymphatic fluid | 1.42e-08 | 15 |
organism substance | 1.42e-08 | 15 |