FFCP PHASE1:Hg19::chr11:35160709..35160726,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=960 | |EntrezGene=960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1681 | |HGNC=1681 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPC6 | |UniProt=E7EPC6 | ||
|association_with_transcript=0bp_to_ENST00000360158,ENST00000415148,ENST00000433354,ENST00000437706,ENST00000449691,ENST00000528086_5end | |association_with_transcript=0bp_to_ENST00000360158,ENST00000415148,ENST00000433354,ENST00000437706,ENST00000449691,ENST00000528086_5end | ||
|cluster_id=chr11:35160709..35160726,+ | |||
|coexpression_cluster_id=C620 | |coexpression_cluster_id=C620 | ||
|description=CAGE_peak_1_at_CD44_5end | |description=CAGE_peak_1_at_CD44_5end | ||
|id=chr11:35160709..35160726,+ | |id=chr11:35160709..35160726,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.43e-21!42;CL:0000557!3.59e-21!71;CL:0000766!7.47e-21!76;CL:0002371!8.56e-21!591;CL:0000860!4.42e-19!45;CL:0000839!1.10e-18!70;CL:0002009!1.28e-18!65;CL:0000144!5.47e-18!625;CL:0002194!8.95e-18!63;CL:0000576!8.95e-18!63;CL:0000040!8.95e-18!63;CL:0000559!8.95e-18!63;CL:0000003!7.07e-17!722;CL:0000012!1.71e-15!682;CL:0000548!4.00e-15!679;CL:0000004!4.00e-15!679;CL:0000255!4.00e-15!679;CL:0000723!4.47e-14!436;CL:0000048!5.15e-14!430;CL:0000034!9.31e-13!444;CL:0002320!6.55e-11!365;CL:0000134!1.18e-10!358;CL:0000055!1.29e-10!180;CL:0002031!2.29e-10!124;CL:0000219!2.45e-10!390;CL:0000738!3.29e-10!140;CL:0000763!3.06e-09!112;CL:0000049!3.06e-09!112;CL:0002087!6.10e-09!119;CL:0000063!8.58e-09!578;CL:0000192!1.15e-07!42;CL:0000514!1.15e-07!42;CL:0000359!4.91e-07!32 | |ontology_enrichment_celltype=CL:0002057!1.43e-21!42;CL:0000557!3.59e-21!71;CL:0000766!7.47e-21!76;CL:0002371!8.56e-21!591;CL:0000860!4.42e-19!45;CL:0000839!1.10e-18!70;CL:0002009!1.28e-18!65;CL:0000144!5.47e-18!625;CL:0002194!8.95e-18!63;CL:0000576!8.95e-18!63;CL:0000040!8.95e-18!63;CL:0000559!8.95e-18!63;CL:0000003!7.07e-17!722;CL:0000012!1.71e-15!682;CL:0000548!4.00e-15!679;CL:0000004!4.00e-15!679;CL:0000255!4.00e-15!679;CL:0000723!4.47e-14!436;CL:0000048!5.15e-14!430;CL:0000034!9.31e-13!444;CL:0002320!6.55e-11!365;CL:0000134!1.18e-10!358;CL:0000055!1.29e-10!180;CL:0002031!2.29e-10!124;CL:0000219!2.45e-10!390;CL:0000738!3.29e-10!140;CL:0000763!3.06e-09!112;CL:0000049!3.06e-09!112;CL:0002087!6.10e-09!119;CL:0000063!8.58e-09!578;CL:0000192!1.15e-07!42;CL:0000514!1.15e-07!42;CL:0000359!4.91e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.01e-19;33!CL:0002057;3.01e-19;33!CL:0000473;1.60e-16;39!CL:0000234;1.60e-16;39!CL:0000576;1.31e-11;48!CL:0000766;6.50e-11;69!CL:0000359;9.92e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.48e-23,67;CL:0000766,9.87e-23,72;CL:0000473,5.69e-22,48;CL:0000234,5.69e-22,48;CL:0000860,1.43e-21,42;CL:0002057,1.43e-21,42;CL:0002009,1.43e-20,61;CL:0000839,1.59e-20,66;CL:0002194,1.06e-19,59;CL:0000576,1.06e-19,59;CL:0000040,1.06e-19,59;CL:0000559,1.06e-19,59;CL:0000723,9.89e-15,433;CL:0000048,1.14e-14,427;CL:0000034,2.24e-13,441;CL:0002320,1.66e-11,361;CL:0000134,3.02e-11,354;CL:0002031,3.84e-11,120;CL:0000738,6.49e-11,136;CL:0000219,6.70e-11,386;CL:0000763,5.57e-10,108;CL:0000049,5.57e-10,108;CL:0002087,1.18e-09,115;CL:0000192,1.41e-07,43;CL:0000514,1.41e-07,43;CL:0000359,4.90e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;6.82e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!8.21e-22!167;UBERON:0002371!1.77e-20!80;UBERON:0004765!3.13e-17!101;UBERON:0001434!3.13e-17!101;UBERON:0001474!3.91e-17!86;UBERON:0002390!2.08e-16!102;UBERON:0003061!2.08e-16!102;UBERON:0002193!1.02e-13!112;UBERON:0002384!3.65e-10!375;UBERON:0003081!4.19e-10!216;UBERON:0003102!1.55e-08!95;UBERON:0002405!2.39e-08!115;UBERON:0004573!5.34e-07!33;UBERON:0004571!5.34e-07!33;UBERON:0001637!7.96e-07!42;UBERON:0003509!7.96e-07!42;UBERON:0004572!7.96e-07!42 | |ontology_enrichment_uberon=UBERON:0002204!8.21e-22!167;UBERON:0002371!1.77e-20!80;UBERON:0004765!3.13e-17!101;UBERON:0001434!3.13e-17!101;UBERON:0001474!3.91e-17!86;UBERON:0002390!2.08e-16!102;UBERON:0003061!2.08e-16!102;UBERON:0002193!1.02e-13!112;UBERON:0002384!3.65e-10!375;UBERON:0003081!4.19e-10!216;UBERON:0003102!1.55e-08!95;UBERON:0002405!2.39e-08!115;UBERON:0004573!5.34e-07!33;UBERON:0004571!5.34e-07!33;UBERON:0001637!7.96e-07!42;UBERON:0003509!7.96e-07!42;UBERON:0004572!7.96e-07!42 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.48e-23,167;UBERON:0002371,2.96e-22,76;UBERON:0004765,8.04e-20,90;UBERON:0001474,1.47e-18,82;UBERON:0001434,1.87e-18,100;UBERON:0002390,1.24e-17,98;UBERON:0003061,1.24e-17,98;UBERON:0002405,3.90e-16,93;UBERON:0002193,1.04e-14,108;UBERON:0002384,9.73e-11,371;UBERON:0003081,4.42e-10,203;UBERON:0003102,2.40e-09,99;UBERON:0000926,3.62e-09,315;UBERON:0004120,3.62e-09,315;UBERON:0006603,3.62e-09,315;UBERON:0004573,5.34e-07,33;UBERON:0004571,5.34e-07,33;UBERON:0001637,7.96e-07,42;UBERON:0003509,7.96e-07,42;UBERON:0004572,7.96e-07,42;UBERON:0002199,8.09e-07,46;UBERON:0002416,8.09e-07,46 | |||
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| ||
|short_description=p1@CD44 | |short_description=p1@CD44 | ||
}} | }} |
Latest revision as of 18:56, 17 September 2015
Short description: | p1@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD44_5end |
Coexpression cluster: | C620_CD14_Smooth_Fibroblast_Mast_signet_normal_meningioma |
Association with transcript: | 0bp_to_ENST00000360158, ENST00000415148, ENST00000433354, ENST00000437706, ENST00000449691, ENST00000528086_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | E7EPC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.48e-23 | 67 |
myeloid leukocyte | 9.87e-23 | 72 |
defensive cell | 5.69e-22 | 48 |
phagocyte | 5.69e-22 | 48 |
classical monocyte | 1.43e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-21 | 42 |
macrophage dendritic cell progenitor | 1.43e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.59e-20 | 66 |
monopoietic cell | 1.06e-19 | 59 |
monocyte | 1.06e-19 | 59 |
monoblast | 1.06e-19 | 59 |
promonocyte | 1.06e-19 | 59 |
somatic stem cell | 9.89e-15 | 433 |
multi fate stem cell | 1.14e-14 | 427 |
stem cell | 2.24e-13 | 441 |
connective tissue cell | 1.66e-11 | 361 |
mesenchymal cell | 3.02e-11 | 354 |
hematopoietic lineage restricted progenitor cell | 3.84e-11 | 120 |
leukocyte | 6.49e-11 | 136 |
motile cell | 6.70e-11 | 386 |
myeloid cell | 5.57e-10 | 108 |
common myeloid progenitor | 5.57e-10 | 108 |
nongranular leukocyte | 1.18e-09 | 115 |
smooth muscle cell | 1.41e-07 | 43 |
smooth muscle myoblast | 1.41e-07 | 43 |
vascular associated smooth muscle cell | 4.90e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 7.48e-23 | 167 |
bone marrow | 2.96e-22 | 76 |
skeletal element | 8.04e-20 | 90 |
bone element | 1.47e-18 | 82 |
skeletal system | 1.87e-18 | 100 |
hematopoietic system | 1.24e-17 | 98 |
blood island | 1.24e-17 | 98 |
immune system | 3.90e-16 | 93 |
hemolymphoid system | 1.04e-14 | 108 |
connective tissue | 9.73e-11 | 371 |
lateral plate mesoderm | 4.42e-10 | 203 |
surface structure | 2.40e-09 | 99 |
mesoderm | 3.62e-09 | 315 |
mesoderm-derived structure | 3.62e-09 | 315 |
presumptive mesoderm | 3.62e-09 | 315 |
systemic artery | 5.34e-07 | 33 |
systemic arterial system | 5.34e-07 | 33 |
artery | 7.96e-07 | 42 |
arterial blood vessel | 7.96e-07 | 42 |
arterial system | 7.96e-07 | 42 |
integument | 8.09e-07 | 46 |
integumental system | 8.09e-07 | 46 |