FFCP PHASE1:Hg19::chr12:20848377..20848399,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53919 | |EntrezGene=53919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13819 | |HGNC=13819 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYB5,Q5JPA4,B7Z3Q3,B7Z251,F5GZD6 | |UniProt=Q9NYB5,Q5JPA4,B7Z3Q3,B7Z251,F5GZD6 | ||
|association_with_transcript=0bp_to_ENST00000266509,ENST00000381552,ENST00000540354,NM_001145944,NM_017435,uc001rei.2,uc010sik.1_5end | |association_with_transcript=0bp_to_ENST00000266509,ENST00000381552,ENST00000540354,NM_001145944,NM_017435,uc001rei.2,uc010sik.1_5end | ||
|cluster_id=chr12:20848377..20848399,+ | |||
|coexpression_cluster_id=C1305 | |coexpression_cluster_id=C1305 | ||
|description=CAGE_peak_5_at_SLCO1C1_5end | |description=CAGE_peak_5_at_SLCO1C1_5end | ||
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|ontology_enrichment_celltype=CL:0002605!4.65e-07!3 | |ontology_enrichment_celltype=CL:0002605!4.65e-07!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.45e-19;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.45e-19;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.57e-84!57;UBERON:0005068!3.57e-84!57;UBERON:0006241!3.57e-84!57;UBERON:0007135!3.57e-84!57;UBERON:0001017!4.07e-75!82;UBERON:0005743!4.81e-74!86;UBERON:0002616!2.20e-73!59;UBERON:0002780!1.56e-70!41;UBERON:0001890!1.56e-70!41;UBERON:0006240!1.56e-70!41;UBERON:0003080!1.31e-68!42;UBERON:0000073!4.20e-68!94;UBERON:0001016!4.20e-68!94;UBERON:0007023!2.69e-66!115;UBERON:0000955!8.45e-63!69;UBERON:0006238!8.45e-63!69;UBERON:0002346!9.29e-61!90;UBERON:0001893!3.88e-60!34;UBERON:0002020!6.72e-60!34;UBERON:0003528!6.72e-60!34;UBERON:0003075!1.08e-58!86;UBERON:0007284!1.08e-58!86;UBERON:0002791!3.79e-58!33;UBERON:0001869!8.55e-56!32;UBERON:0003056!9.64e-47!61;UBERON:0000956!2.45e-41!25;UBERON:0000203!2.45e-41!25;UBERON:0000924!4.58e-37!173;UBERON:0006601!4.58e-37!173;UBERON:0000153!9.58e-37!129;UBERON:0007811!9.58e-37!129;UBERON:0000033!5.92e-36!123;UBERON:0002619!7.36e-36!22;UBERON:0004121!4.10e-35!169;UBERON:0001950!1.55e-31!20;UBERON:0000025!1.70e-20!194;UBERON:0002420!4.03e-20!9;UBERON:0007245!4.03e-20!9;UBERON:0010009!4.03e-20!9;UBERON:0010011!4.03e-20!9;UBERON:0000454!4.03e-20!9;UBERON:0002308!7.35e-20!9;UBERON:0000125!7.35e-20!9;UBERON:0004111!1.08e-17!241;UBERON:0003076!2.52e-16!15;UBERON:0003057!2.52e-16!15;UBERON:0009663!4.35e-16!7;UBERON:0000477!1.24e-14!286;UBERON:0002298!6.28e-14!8;UBERON:0000349!4.67e-12!5;UBERON:0002021!1.05e-11!5;UBERON:0001894!1.69e-11!7;UBERON:0006222!1.69e-11!7;UBERON:0000475!1.83e-11!365;UBERON:0001872!2.87e-11!5;UBERON:0000483!3.74e-11!309;UBERON:0004733!4.63e-11!12;UBERON:0002028!4.63e-11!12;UBERON:0007277!4.63e-11!12;UBERON:0000119!6.67e-11!312;UBERON:0001871!2.75e-10!7;UBERON:0004732!4.37e-10!13;UBERON:0000064!5.38e-10!219;UBERON:0000200!8.03e-10!6;UBERON:0000369!9.18e-10!4;UBERON:0002435!9.18e-10!4;UBERON:0000204!9.18e-10!4;UBERON:0010082!9.18e-10!4;UBERON:0000481!2.22e-09!347;UBERON:0001896!3.12e-08!3;UBERON:0005290!3.12e-08!3;UBERON:0010096!3.12e-08!3;UBERON:0000062!3.30e-08!511;UBERON:0002771!3.67e-08!3;UBERON:0000922!4.77e-08!612;UBERON:0005383!7.83e-08!3;UBERON:0005382!7.83e-08!3;UBERON:0006331!1.47e-07!3;UBERON:0002240!1.53e-07!3;UBERON:0000988!1.87e-07!3;UBERON:0000923!2.24e-07!604;UBERON:0005291!2.24e-07!604;UBERON:0006598!2.24e-07!604;UBERON:0002532!2.24e-07!604;UBERON:0002050!2.49e-07!605;UBERON:0005423!2.49e-07!605;UBERON:0000468!5.80e-07!659 | |ontology_enrichment_uberon=UBERON:0001049!3.57e-84!57;UBERON:0005068!3.57e-84!57;UBERON:0006241!3.57e-84!57;UBERON:0007135!3.57e-84!57;UBERON:0001017!4.07e-75!82;UBERON:0005743!4.81e-74!86;UBERON:0002616!2.20e-73!59;UBERON:0002780!1.56e-70!41;UBERON:0001890!1.56e-70!41;UBERON:0006240!1.56e-70!41;UBERON:0003080!1.31e-68!42;UBERON:0000073!4.20e-68!94;UBERON:0001016!4.20e-68!94;UBERON:0007023!2.69e-66!115;UBERON:0000955!8.45e-63!69;UBERON:0006238!8.45e-63!69;UBERON:0002346!9.29e-61!90;UBERON:0001893!3.88e-60!34;UBERON:0002020!6.72e-60!34;UBERON:0003528!6.72e-60!34;UBERON:0003075!1.08e-58!86;UBERON:0007284!1.08e-58!86;UBERON:0002791!3.79e-58!33;UBERON:0001869!8.55e-56!32;UBERON:0003056!9.64e-47!61;UBERON:0000956!2.45e-41!25;UBERON:0000203!2.45e-41!25;UBERON:0000924!4.58e-37!173;UBERON:0006601!4.58e-37!173;UBERON:0000153!9.58e-37!129;UBERON:0007811!9.58e-37!129;UBERON:0000033!5.92e-36!123;UBERON:0002619!7.36e-36!22;UBERON:0004121!4.10e-35!169;UBERON:0001950!1.55e-31!20;UBERON:0000025!1.70e-20!194;UBERON:0002420!4.03e-20!9;UBERON:0007245!4.03e-20!9;UBERON:0010009!4.03e-20!9;UBERON:0010011!4.03e-20!9;UBERON:0000454!4.03e-20!9;UBERON:0002308!7.35e-20!9;UBERON:0000125!7.35e-20!9;UBERON:0004111!1.08e-17!241;UBERON:0003076!2.52e-16!15;UBERON:0003057!2.52e-16!15;UBERON:0009663!4.35e-16!7;UBERON:0000477!1.24e-14!286;UBERON:0002298!6.28e-14!8;UBERON:0000349!4.67e-12!5;UBERON:0002021!1.05e-11!5;UBERON:0001894!1.69e-11!7;UBERON:0006222!1.69e-11!7;UBERON:0000475!1.83e-11!365;UBERON:0001872!2.87e-11!5;UBERON:0000483!3.74e-11!309;UBERON:0004733!4.63e-11!12;UBERON:0002028!4.63e-11!12;UBERON:0007277!4.63e-11!12;UBERON:0000119!6.67e-11!312;UBERON:0001871!2.75e-10!7;UBERON:0004732!4.37e-10!13;UBERON:0000064!5.38e-10!219;UBERON:0000200!8.03e-10!6;UBERON:0000369!9.18e-10!4;UBERON:0002435!9.18e-10!4;UBERON:0000204!9.18e-10!4;UBERON:0010082!9.18e-10!4;UBERON:0000481!2.22e-09!347;UBERON:0001896!3.12e-08!3;UBERON:0005290!3.12e-08!3;UBERON:0010096!3.12e-08!3;UBERON:0000062!3.30e-08!511;UBERON:0002771!3.67e-08!3;UBERON:0000922!4.77e-08!612;UBERON:0005383!7.83e-08!3;UBERON:0005382!7.83e-08!3;UBERON:0006331!1.47e-07!3;UBERON:0002240!1.53e-07!3;UBERON:0000988!1.87e-07!3;UBERON:0000923!2.24e-07!604;UBERON:0005291!2.24e-07!604;UBERON:0006598!2.24e-07!604;UBERON:0002532!2.24e-07!604;UBERON:0002050!2.49e-07!605;UBERON:0005423!2.49e-07!605;UBERON:0000468!5.80e-07!659 | ||
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|short_description=p5@SLCO1C1 | |short_description=p5@SLCO1C1 | ||
}} | }} |
Latest revision as of 19:05, 17 September 2015
Short description: | p5@SLCO1C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLCO1C1_5end |
Coexpression cluster: | C1305_neuroectodermal_medulla_retina_peripheral_hippocampus_caudate_pituitary |
Association with transcript: | 0bp_to_ENST00000266509, ENST00000381552, ENST00000540354, NM_001145944, NM_017435, uc001rei.2, uc010sik.1_5end |
EntrezGene: | SLCO1C1 |
HGNC: | 13819 |
UniProt: | Q9NYB5Q5JPA4B7Z3Q3B7Z251F5GZD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data