FFCP PHASE1:Hg19::chr2:5832508..5832524,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6664 | |EntrezGene=6664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11191 | |HGNC=11191 | ||
|TSSclassifier=strong | |||
|UniProt=P35716 | |UniProt=P35716 | ||
|association_with_transcript=-274bp_to_ENST00000322002,NM_003108,uc002qyj.2_5end | |association_with_transcript=-274bp_to_ENST00000322002,NM_003108,uc002qyj.2_5end | ||
|cluster_id=chr2:5832508..5832524,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_SOX11_5end | |description=CAGE_peak_1_at_SOX11_5end | ||
|id=chr2:5832508..5832524,+ | |id=chr2:5832508..5832524,+ | ||
|ontology_enrichment_celltype=CL:0000133!1.04e-19!59;CL:0000055!7.35e-18!180;CL:0000333!1.74e-15!41;CL:0000221!6.73e-15!71;CL:0002319!7.18e-15!25;CL:1000449!4.89e-09!16;CL:0000095!5.07e-09!17;CL:0000123!5.07e-09!17;CL:0000147!6.58e-09!14;CL:0000047!9.64e-08!8;CL:0000243!1.14e-07!15;CL:0000125!1.14e-07!15;CL:0000030!1.14e-07!15;CL:0000339!1.14e-07!15;CL:1000497!2.43e-07!18;CL:0002518!2.43e-07!18;CL:0002681!2.89e-07!13;CL:0002584!2.89e-07!13;CL:0000075!3.01e-07!27;CL:1000507!5.03e-07!12;CL:1000494!5.03e-07!12 | |ontology_enrichment_celltype=CL:0000133!1.04e-19!59;CL:0000055!7.35e-18!180;CL:0000333!1.74e-15!41;CL:0000221!6.73e-15!71;CL:0002319!7.18e-15!25;CL:1000449!4.89e-09!16;CL:0000095!5.07e-09!17;CL:0000123!5.07e-09!17;CL:0000147!6.58e-09!14;CL:0000047!9.64e-08!8;CL:0000243!1.14e-07!15;CL:0000125!1.14e-07!15;CL:0000030!1.14e-07!15;CL:0000339!1.14e-07!15;CL:1000497!2.43e-07!18;CL:0002518!2.43e-07!18;CL:0002681!2.89e-07!13;CL:0002584!2.89e-07!13;CL:0000075!3.01e-07!27;CL:1000507!5.03e-07!12;CL:1000494!5.03e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.60e-17;25!CL:0002321;1.46e-10;15!CL:0000095;1.66e-10;17!CL:0000147;3.60e-10;14!CL:1000449;1.07e-09;15!CL:0000243;6.28e-09;15!CL:0000125;6.28e-09;15!CL:0000075;3.26e-08;27!CL:1000497;5.74e-08;17!CL:0002518;5.74e-08;17!CL:0002681;1.16e-07;12!CL:0002584;1.16e-07;12!CL:0000148;1.50e-07;10!CL:1000507;3.85e-07;10!CL:1000494;3.85e-07;10!CL:0000540;4.26e-07;6!CL:0000404;4.26e-07;6!CL:0000188;8.23e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.51e-23,59;CL:0000333,2.22e-18,41;CL:0002319,2.93e-17,25;CL:0000221,1.15e-16,72;CL:0000095,1.87e-10,17;CL:0000123,1.87e-10,17;CL:0000147,4.47e-10,14;CL:1000449,9.23e-10,15;CL:0000243,7.00e-09,15;CL:0000125,7.00e-09,15;CL:0000030,7.00e-09,15;CL:0000339,7.00e-09,15;CL:0000047,1.00e-08,8;CL:0000075,3.47e-08,27;CL:1000497,5.06e-08,17;CL:0002518,5.06e-08,17;CL:0002681,1.04e-07,12;CL:0002584,1.04e-07,12;CL:0000148,1.77e-07,10;CL:0000541,1.77e-07,10;CL:1000507,3.30e-07,10;CL:1000494,3.30e-07,10;CL:0000540,4.35e-07,6;CL:0000031,4.35e-07,6;CL:0000404,4.35e-07,6;CL:0000188,8.54e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000133;1.62e-11;59!CL:0000339;6.28e-09;15!CL:0000221;1.54e-07;72!UBERON:0006238;3.40e-07;10!CL:0000031;4.26e-07;6 | |||
|ontology_enrichment_disease=DOID:171!7.94e-07!10 | |ontology_enrichment_disease=DOID:171!7.94e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;8.28e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.24e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.33e-28!94;UBERON:0001016!3.33e-28!94;UBERON:0005743!1.44e-25!86;UBERON:0001017!7.57e-24!82;UBERON:0000924!2.04e-23!173;UBERON:0006601!2.04e-23!173;UBERON:0004121!2.38e-21!169;UBERON:0002346!2.68e-18!90;UBERON:0000955!8.41e-18!69;UBERON:0006238!8.41e-18!69;UBERON:0003075!3.92e-16!86;UBERON:0007284!3.92e-16!86;UBERON:0000033!3.92e-15!123;UBERON:0000475!1.53e-14!365;UBERON:0003056!2.16e-14!61;UBERON:0000153!2.89e-14!129;UBERON:0007811!2.89e-14!129;UBERON:0000481!2.68e-13!347;UBERON:0002616!3.48e-13!59;UBERON:0001049!1.06e-12!57;UBERON:0005068!1.06e-12!57;UBERON:0006241!1.06e-12!57;UBERON:0007135!1.06e-12!57;UBERON:0000119!3.38e-12!312;UBERON:0000483!2.67e-11!309;UBERON:0000064!4.36e-11!219;UBERON:0002020!3.06e-10!34;UBERON:0003528!3.06e-10!34;UBERON:0001893!3.74e-10!34;UBERON:0002791!4.44e-10!33;UBERON:0001869!1.08e-09!32;UBERON:0002780!2.11e-09!41;UBERON:0001890!2.11e-09!41;UBERON:0006240!2.11e-09!41;UBERON:0000922!3.35e-09!612;UBERON:0004211!4.89e-09!16;UBERON:0001285!4.89e-09!16;UBERON:0007684!4.89e-09!16;UBERON:0003220!4.89e-09!16;UBERON:0004208!4.89e-09!16;UBERON:0000468!6.48e-09!659;UBERON:0003080!6.55e-09!42;UBERON:0006555!3.93e-08!17;UBERON:0005103!3.93e-08!17;UBERON:0000083!3.93e-08!17;UBERON:0009201!3.93e-08!17;UBERON:0004819!3.93e-08!17;UBERON:0006553!3.93e-08!17;UBERON:0003074!3.93e-08!17;UBERON:0003060!3.93e-08!17;UBERON:0000956!5.82e-08!25;UBERON:0000203!5.82e-08!25;UBERON:0002104!1.40e-07!21;UBERON:0000914!1.50e-07!83;UBERON:0002329!1.50e-07!83;UBERON:0003077!1.50e-07!83;UBERON:0003059!1.50e-07!83;UBERON:0007282!1.50e-07!83;UBERON:0009618!1.50e-07!83;UBERON:0007285!1.50e-07!83;UBERON:0000970!1.92e-07!20;UBERON:0000080!2.43e-07!18;UBERON:0002120!2.43e-07!18;UBERON:0004875!2.43e-07!18;UBERON:0005721!2.43e-07!18;UBERON:0005754!2.43e-07!18;UBERON:0007297!2.43e-07!18;UBERON:0001225!2.89e-07!13;UBERON:0008987!2.89e-07!13;UBERON:0009773!5.03e-07!12;UBERON:0001231!5.03e-07!12;UBERON:0004810!5.03e-07!12;UBERON:0002050!5.43e-07!605;UBERON:0005423!5.43e-07!605;UBERON:0000019!5.71e-07!19;UBERON:0000047!5.71e-07!19;UBERON:0004088!5.71e-07!19;UBERON:0003072!5.71e-07!19;UBERON:0003071!5.71e-07!19;UBERON:0004128!5.71e-07!19;UBERON:0000025!6.10e-07!194;UBERON:0005256!6.83e-07!143;UBERON:0001456!8.19e-07!21;UBERON:0004290!9.44e-07!70;UBERON:0000923!9.86e-07!604;UBERON:0005291!9.86e-07!604;UBERON:0006598!9.86e-07!604;UBERON:0002532!9.86e-07!604 | |ontology_enrichment_uberon=UBERON:0000073!3.33e-28!94;UBERON:0001016!3.33e-28!94;UBERON:0005743!1.44e-25!86;UBERON:0001017!7.57e-24!82;UBERON:0000924!2.04e-23!173;UBERON:0006601!2.04e-23!173;UBERON:0004121!2.38e-21!169;UBERON:0002346!2.68e-18!90;UBERON:0000955!8.41e-18!69;UBERON:0006238!8.41e-18!69;UBERON:0003075!3.92e-16!86;UBERON:0007284!3.92e-16!86;UBERON:0000033!3.92e-15!123;UBERON:0000475!1.53e-14!365;UBERON:0003056!2.16e-14!61;UBERON:0000153!2.89e-14!129;UBERON:0007811!2.89e-14!129;UBERON:0000481!2.68e-13!347;UBERON:0002616!3.48e-13!59;UBERON:0001049!1.06e-12!57;UBERON:0005068!1.06e-12!57;UBERON:0006241!1.06e-12!57;UBERON:0007135!1.06e-12!57;UBERON:0000119!3.38e-12!312;UBERON:0000483!2.67e-11!309;UBERON:0000064!4.36e-11!219;UBERON:0002020!3.06e-10!34;UBERON:0003528!3.06e-10!34;UBERON:0001893!3.74e-10!34;UBERON:0002791!4.44e-10!33;UBERON:0001869!1.08e-09!32;UBERON:0002780!2.11e-09!41;UBERON:0001890!2.11e-09!41;UBERON:0006240!2.11e-09!41;UBERON:0000922!3.35e-09!612;UBERON:0004211!4.89e-09!16;UBERON:0001285!4.89e-09!16;UBERON:0007684!4.89e-09!16;UBERON:0003220!4.89e-09!16;UBERON:0004208!4.89e-09!16;UBERON:0000468!6.48e-09!659;UBERON:0003080!6.55e-09!42;UBERON:0006555!3.93e-08!17;UBERON:0005103!3.93e-08!17;UBERON:0000083!3.93e-08!17;UBERON:0009201!3.93e-08!17;UBERON:0004819!3.93e-08!17;UBERON:0006553!3.93e-08!17;UBERON:0003074!3.93e-08!17;UBERON:0003060!3.93e-08!17;UBERON:0000956!5.82e-08!25;UBERON:0000203!5.82e-08!25;UBERON:0002104!1.40e-07!21;UBERON:0000914!1.50e-07!83;UBERON:0002329!1.50e-07!83;UBERON:0003077!1.50e-07!83;UBERON:0003059!1.50e-07!83;UBERON:0007282!1.50e-07!83;UBERON:0009618!1.50e-07!83;UBERON:0007285!1.50e-07!83;UBERON:0000970!1.92e-07!20;UBERON:0000080!2.43e-07!18;UBERON:0002120!2.43e-07!18;UBERON:0004875!2.43e-07!18;UBERON:0005721!2.43e-07!18;UBERON:0005754!2.43e-07!18;UBERON:0007297!2.43e-07!18;UBERON:0001225!2.89e-07!13;UBERON:0008987!2.89e-07!13;UBERON:0009773!5.03e-07!12;UBERON:0001231!5.03e-07!12;UBERON:0004810!5.03e-07!12;UBERON:0002050!5.43e-07!605;UBERON:0005423!5.43e-07!605;UBERON:0000019!5.71e-07!19;UBERON:0000047!5.71e-07!19;UBERON:0004088!5.71e-07!19;UBERON:0003072!5.71e-07!19;UBERON:0003071!5.71e-07!19;UBERON:0004128!5.71e-07!19;UBERON:0000025!6.10e-07!194;UBERON:0005256!6.83e-07!143;UBERON:0001456!8.19e-07!21;UBERON:0004290!9.44e-07!70;UBERON:0000923!9.86e-07!604;UBERON:0005291!9.86e-07!604;UBERON:0006598!9.86e-07!604;UBERON:0002532!9.86e-07!604 | ||
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| ||
|short_description=p1@SOX11 | |short_description=p1@SOX11 | ||
}} | }} |
Latest revision as of 19:13, 17 September 2015
Short description: | p1@SOX11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX11_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -274bp_to_ENST00000322002, NM_003108, uc002qyj.2_5end |
EntrezGene: | SOX11 |
HGNC: | 11191 |
UniProt: | P35716 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.51e-23 | 59 |
migratory neural crest cell | 2.22e-18 | 41 |
neural cell | 2.93e-17 | 25 |
ectodermal cell | 1.15e-16 | 72 |
neuron associated cell | 1.87e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 1.87e-10 | 17 |
pigment cell | 4.47e-10 | 14 |
epithelial cell of nephron | 9.23e-10 | 15 |
glial cell (sensu Vertebrata) | 7.00e-09 | 15 |
glial cell | 7.00e-09 | 15 |
glioblast | 7.00e-09 | 15 |
glioblast (sensu Vertebrata) | 7.00e-09 | 15 |
neuronal stem cell | 1.00e-08 | 8 |
columnar/cuboidal epithelial cell | 3.47e-08 | 27 |
kidney cell | 5.06e-08 | 17 |
kidney epithelial cell | 5.06e-08 | 17 |
kidney cortical cell | 1.04e-07 | 12 |
renal cortical epithelial cell | 1.04e-07 | 12 |
melanocyte | 1.77e-07 | 10 |
melanoblast | 1.77e-07 | 10 |
kidney tubule cell | 3.30e-07 | 10 |
nephron tubule epithelial cell | 3.30e-07 | 10 |
neuron | 4.35e-07 | 6 |
neuroblast | 4.35e-07 | 6 |
electrically signaling cell | 4.35e-07 | 6 |
cell of skeletal muscle | 8.54e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.24e-08 | 10 |