FFCP PHASE1:Hg19::chr6:31324982..31324995,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3106 | |EntrezGene=3106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4932 | |HGNC=4932 | ||
|TSSclassifier=strong | |||
|UniProt=E5FQ95,P01889,Q92671 | |UniProt=E5FQ95,P01889,Q92671 | ||
|association_with_transcript=0bp_to_NM_005514,uc003ntf.2,uc003nth.2_5end | |association_with_transcript=0bp_to_NM_005514,uc003ntf.2,uc003nth.2_5end | ||
|cluster_id=chr6:31324982..31324995,- | |||
|coexpression_cluster_id=C4586 | |coexpression_cluster_id=C4586 | ||
|description=CAGE_peak_2_at_HLA-B_5end | |description=CAGE_peak_2_at_HLA-B_5end | ||
|id=chr6:31324982..31324995,- | |id=chr6:31324982..31324995,- | ||
|ontology_enrichment_celltype=CL:0000738!1.63e-44!140;CL:0002087!1.09e-39!119;CL:0002031!7.76e-37!124;CL:0000037!1.86e-32!172;CL:0000566!1.86e-32!172;CL:0000988!2.31e-31!182;CL:0002032!7.20e-31!165;CL:0000837!7.20e-31!165;CL:0000766!1.49e-28!76;CL:0002009!2.92e-25!65;CL:0000557!6.66e-25!71;CL:0002194!1.14e-24!63;CL:0000576!1.14e-24!63;CL:0000040!1.14e-24!63;CL:0000559!1.14e-24!63;CL:0000839!4.38e-22!70;CL:0002057!1.93e-21!42;CL:0000860!8.27e-19!45;CL:0000763!1.28e-16!112;CL:0000049!1.28e-16!112;CL:0000542!7.40e-14!53;CL:0000051!7.40e-14!53;CL:0000838!1.30e-13!52;CL:0000134!6.22e-13!358;CL:0002320!4.61e-12!365;CL:0000048!3.49e-11!430;CL:0000723!3.29e-10!436;CL:0000034!1.06e-09!444;CL:0000945!2.91e-08!24;CL:0000826!2.91e-08!24;CL:0000219!8.56e-08!390 | |ontology_enrichment_celltype=CL:0000738!1.63e-44!140;CL:0002087!1.09e-39!119;CL:0002031!7.76e-37!124;CL:0000037!1.86e-32!172;CL:0000566!1.86e-32!172;CL:0000988!2.31e-31!182;CL:0002032!7.20e-31!165;CL:0000837!7.20e-31!165;CL:0000766!1.49e-28!76;CL:0002009!2.92e-25!65;CL:0000557!6.66e-25!71;CL:0002194!1.14e-24!63;CL:0000576!1.14e-24!63;CL:0000040!1.14e-24!63;CL:0000559!1.14e-24!63;CL:0000839!4.38e-22!70;CL:0002057!1.93e-21!42;CL:0000860!8.27e-19!45;CL:0000763!1.28e-16!112;CL:0000049!1.28e-16!112;CL:0000542!7.40e-14!53;CL:0000051!7.40e-14!53;CL:0000838!1.30e-13!52;CL:0000134!6.22e-13!358;CL:0002320!4.61e-12!365;CL:0000048!3.49e-11!430;CL:0000723!3.29e-10!436;CL:0000034!1.06e-09!444;CL:0000945!2.91e-08!24;CL:0000826!2.91e-08!24;CL:0000219!8.56e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.42e-16;33!CL:0002057;3.42e-16;33!CL:0000473;7.62e-16;39!CL:0000234;7.62e-16;39!CL:0000576;3.80e-15;48!CL:0000766;3.35e-13;69!CL:0002087;1.91e-11;104!CL:0000738;5.06e-10;136!CL:0000542;2.13e-08;53!CL:0000945;2.97e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.54e-46,136;CL:0002087,1.35e-41,115;CL:0002031,1.45e-38,120;CL:0000037,1.10e-33,168;CL:0000988,1.00e-32,177;CL:0002032,4.30e-32,161;CL:0000837,4.30e-32,161;CL:0000766,1.02e-30,72;CL:0002009,1.67e-27,61;CL:0000557,5.99e-27,67;CL:0002194,6.28e-27,59;CL:0000576,6.28e-27,59;CL:0000040,6.28e-27,59;CL:0000559,6.28e-27,59;CL:0000473,5.60e-24,48;CL:0000234,5.60e-24,48;CL:0000839,5.93e-24,66;CL:0000860,1.92e-21,42;CL:0002057,1.92e-21,42;CL:0000763,1.17e-17,108;CL:0000049,1.17e-17,108;CL:0000542,7.37e-14,53;CL:0000051,7.37e-14,53;CL:0000838,1.29e-13,52;CL:0000134,1.59e-13,354;CL:0002320,1.26e-12,361;CL:0000048,1.53e-11,427;CL:0000723,1.46e-10,433;CL:0000034,4.84e-10,441;CL:0000945,2.91e-08,24;CL:0000826,2.91e-08,24;CL:0000219,3.15e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-15;42!CL:0000051;2.13e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.05e-32!112;UBERON:0002390!2.87e-31!102;UBERON:0003061!2.87e-31!102;UBERON:0002371!1.26e-23!80;UBERON:0001474!1.00e-22!86;UBERON:0002405!2.52e-21!115;UBERON:0004765!5.12e-17!101;UBERON:0001434!5.12e-17!101;UBERON:0002384!3.46e-12!375;UBERON:0003081!5.85e-12!216;UBERON:0002204!7.14e-10!167;UBERON:0000178!1.05e-07!15;UBERON:0000179!1.05e-07!15;UBERON:0000463!1.05e-07!15 | |ontology_enrichment_uberon=UBERON:0002193!2.05e-32!112;UBERON:0002390!2.87e-31!102;UBERON:0003061!2.87e-31!102;UBERON:0002371!1.26e-23!80;UBERON:0001474!1.00e-22!86;UBERON:0002405!2.52e-21!115;UBERON:0004765!5.12e-17!101;UBERON:0001434!5.12e-17!101;UBERON:0002384!3.46e-12!375;UBERON:0003081!5.85e-12!216;UBERON:0002204!7.14e-10!167;UBERON:0000178!1.05e-07!15;UBERON:0000179!1.05e-07!15;UBERON:0000463!1.05e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.04e-07;15!UBERON:0000179;1.04e-07;15!UBERON:0000463;1.04e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.91e-34,108;UBERON:0002390,4.41e-33,98;UBERON:0003061,4.41e-33,98;UBERON:0002405,2.70e-27,93;UBERON:0002371,2.10e-25,76;UBERON:0001474,2.43e-24,82;UBERON:0004765,5.66e-20,90;UBERON:0001434,6.16e-17,100;UBERON:0003081,2.69e-13,203;UBERON:0002384,9.35e-13,371;UBERON:0002204,1.39e-09,167;UBERON:0000178,1.05e-07,15;UBERON:0000179,1.05e-07,15;UBERON:0000463,1.05e-07,15;UBERON:0000926,1.96e-07,315;UBERON:0004120,1.96e-07,315;UBERON:0006603,1.96e-07,315 | |||
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| ||
|short_description=p2@HLA-B | |short_description=p2@HLA-B | ||
}} | }} |
Latest revision as of 20:25, 17 September 2015
Short description: | p2@HLA-B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HLA-B_5end |
Coexpression cluster: | C4586_Eosinophils_CD14_myeloma_renal_CD4_smallcell_Neutrophils |
Association with transcript: | 0bp_to_NM_005514, uc003ntf.2, uc003nth.2_5end |
EntrezGene: | HLA-B |
HGNC: | 4932 |
UniProt: | E5FQ95P01889Q92671 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.91e-34 | 108 |
hematopoietic system | 4.41e-33 | 98 |
blood island | 4.41e-33 | 98 |
immune system | 2.70e-27 | 93 |
bone marrow | 2.10e-25 | 76 |
bone element | 2.43e-24 | 82 |
skeletal element | 5.66e-20 | 90 |
skeletal system | 6.16e-17 | 100 |
lateral plate mesoderm | 2.69e-13 | 203 |
connective tissue | 9.35e-13 | 371 |
musculoskeletal system | 1.39e-09 | 167 |
blood | 1.05e-07 | 15 |
haemolymphatic fluid | 1.05e-07 | 15 |
organism substance | 1.05e-07 | 15 |
mesoderm | 1.96e-07 | 315 |
mesoderm-derived structure | 1.96e-07 | 315 |
presumptive mesoderm | 1.96e-07 | 315 |