FFCP PHASE1:Hg19::chr2:61108771..61108789,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:61108771..61108789,+ to FFCP PHASE1:Hg19::chr2:61108771..61108789,+: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5966 | |EntrezGene=5966 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9954 | |HGNC=9954 | ||
|TSSclassifier=strong | |||
|UniProt=Q17RU2 | |UniProt=Q17RU2 | ||
|association_with_transcript=-1bp_to_ENST00000394479_5end | |||
|cluster_id=chr2:61108771..61108789,+ | |||
|coexpression_cluster_id=C1685 | |||
|description=CAGE_peak_4_at_REL_5end | |||
|id=chr2:61108771..61108789,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.98e-48!140;CL:0000037!1.95e-37!172;CL:0000566!1.95e-37!172;CL:0002031!1.58e-36!124;CL:0002087!7.32e-36!119;CL:0002032!1.08e-35!165;CL:0000837!1.08e-35!165;CL:0000988!8.49e-35!182;CL:0000766!4.73e-34!76;CL:0000557!1.66e-30!71;CL:0002009!3.42e-27!65;CL:0000839!5.25e-27!70;CL:0002194!7.50e-26!63;CL:0000576!7.50e-26!63;CL:0000040!7.50e-26!63;CL:0000559!7.50e-26!63;CL:0000860!9.25e-26!45;CL:0000763!2.56e-25!112;CL:0000049!2.56e-25!112;CL:0002057!4.59e-25!42;CL:0000542!1.83e-09!53;CL:0000051!1.83e-09!53;CL:0000838!3.90e-09!52;CL:0000451!9.54e-08!10;CL:0000945!3.01e-07!24;CL:0000826!3.01e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.10e-25;33!CL:0002057;5.10e-25;33!CL:0000473;3.38e-23;39!CL:0000234;3.38e-23;39!CL:0000576;9.86e-21;48!CL:0000766;8.59e-20;69!CL:0000738;1.05e-13;136!CL:0002087;1.17e-13;104!CL:0000451;3.36e-10;10!CL:0000990;9.84e-09;8!CL:0000094;1.16e-08;8!CL:0000945;4.35e-08;24!CL:0000988;4.55e-08;177!CL:0000763;9.53e-08;100!CL:0000081;3.28e-07;11!CL:0000542;4.41e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.23e-64,136;CL:0002031,4.00e-48,120;CL:0000766,1.69e-47,72;CL:0002087,1.05e-46,115;CL:0000037,1.51e-46,168;CL:0000988,1.16e-45,177;CL:0002032,7.25e-44,161;CL:0000837,7.25e-44,161;CL:0000557,1.73e-42,67;CL:0000839,5.16e-38,66;CL:0002009,7.94e-38,61;CL:0000473,4.50e-37,48;CL:0000234,4.50e-37,48;CL:0002194,6.29e-36,59;CL:0000576,6.29e-36,59;CL:0000040,6.29e-36,59;CL:0000559,6.29e-36,59;CL:0000860,2.09e-34,42;CL:0002057,2.09e-34,42;CL:0000763,6.95e-32,108;CL:0000049,6.95e-32,108;CL:0000542,9.58e-11,53;CL:0000051,9.58e-11,53;CL:0000838,2.61e-10,52;CL:0000451,3.37e-10,10;CL:0000990,1.01e-08,8;CL:0000094,1.18e-08,8;CL:0000945,2.62e-08,24;CL:0000826,2.62e-08,24;CL:0002393,3.51e-08,9;CL:0002397,3.51e-08,9;CL:0000134,1.08e-07,354;CL:0000081,3.34e-07,11;CL:0002320,6.36e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-24;42!CL:0000049;1.50e-08;108!CL:0000051;4.41e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.48e-29!102;UBERON:0003061!3.48e-29!102;UBERON:0002193!2.71e-28!112;UBERON:0002371!1.24e-23!80;UBERON:0001474!7.02e-23!86;UBERON:0002405!1.07e-21!115;UBERON:0004765!1.15e-17!101;UBERON:0001434!1.15e-17!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.60e-41,98;UBERON:0003061,5.60e-41,98;UBERON:0002193,2.84e-39,108;UBERON:0002405,1.63e-35,93;UBERON:0002371,4.14e-35,76;UBERON:0001474,1.08e-31,82;UBERON:0004765,1.81e-27,90;UBERON:0001434,4.31e-22,100;UBERON:0003081,6.79e-10,203 | |||
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| ||
|short_description=p4@REL | |||
}} | }} |
Latest revision as of 20:45, 17 September 2015
Short description: | p4@REL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_REL_5end |
Coexpression cluster: | C1685_immature_CD14_Eosinophils_CD34_migratory_lymphoma_Neutrophils |
Association with transcript: | -1bp_to_ENST00000394479_5end |
EntrezGene: | REL |
HGNC: | 9954 |
UniProt: | Q17RU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.60e-41 | 98 |
blood island | 5.60e-41 | 98 |
hemolymphoid system | 2.84e-39 | 108 |
immune system | 1.63e-35 | 93 |
bone marrow | 4.14e-35 | 76 |
bone element | 1.08e-31 | 82 |
skeletal element | 1.81e-27 | 90 |
skeletal system | 4.31e-22 | 100 |
lateral plate mesoderm | 6.79e-10 | 203 |