FFCP PHASE1:Hg19::chr12:25228668..25228683,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:25228668..25228683,+
|short_description=p10@LRMP
|description=CAGE_peak_10_at_LRMP_5end
|association_with_transcript=0bp_to_ENST00000557472_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4033 | |EntrezGene=4033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6690 | |HGNC=6690 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000557472_5end | |||
|cluster_id=chr12:25228668..25228683,+ | |||
|description=CAGE_peak_10_at_LRMP_5end | |||
|id=chr12:25228668..25228683,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.55e-35!24;CL:0000826!2.55e-35!24;CL:0000236!3.11e-20!14;CL:0000542!8.66e-17!53;CL:0000051!8.66e-17!53;CL:0000838!1.94e-15!52;CL:0001014!2.54e-07!2;CL:0001016!2.54e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.69e-21;13!CL:0000945;8.32e-15;24!CL:0000946;7.85e-09;1!CL:0000786;7.85e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.27e-26,14;CL:0000945,7.97e-15,24;CL:0000826,7.97e-15,24;CL:0000946,8.49e-09,1;CL:0000786,8.49e-09,1;CL:0000980,8.49e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0004874;4.03e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.07e-07!2;UBERON:0007023!1.53e-07!115;UBERON:0003127!2.62e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;3.29e-17;2!UBERON:0003127;2.19e-16;2!UBERON:0000160;6.77e-11;17!UBERON:0002372;4.03e-09;1!UBERON:0000989;4.03e-09;1!UBERON:0008811;4.03e-09;1!UBERON:0001961;4.03e-09;1!UBERON:0001744;4.03e-09;1!UBERON:0001042;4.03e-09;1!UBERON:0001735;4.03e-09;1!UBERON:0007029;7.85e-09;1!UBERON:0000996;7.85e-09;1!UBERON:0001155;1.51e-08;9!UBERON:0005409;1.76e-08;22!UBERON:0002108;3.11e-07;4!UBERON:0000059;4.50e-07;11!UBERON:0004921;5.29e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,3.30e-17,2;UBERON:0003127,3.23e-16,2;UBERON:0000160,6.98e-11,17;UBERON:0000989,3.88e-09,1;UBERON:0008811,3.88e-09,1;UBERON:0006258,3.88e-09,1;UBERON:0005876,3.88e-09,1;UBERON:0004874,3.88e-09,1;UBERON:0002372,4.91e-09,1;UBERON:0001961,4.91e-09,1;UBERON:0001744,4.91e-09,1;UBERON:0001735,4.91e-09,1;UBERON:0000996,5.31e-09,1;UBERON:0007029,6.72e-09,1;UBERON:0001155,1.51e-08,9;UBERON:0005409,1.82e-07,25;UBERON:0002108,3.25e-07,4;UBERON:0000059,4.50e-07,11 | |||
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| ||
|short_description=p10@LRMP | |||
}} | }} |
Latest revision as of 22:32, 17 September 2015
Short description: | p10@LRMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LRMP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000557472_5end |
EntrezGene: | LRMP |
HGNC: | 6690 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.27e-26 | 14 |
lymphocyte of B lineage | 7.97e-15 | 24 |
pro-B cell | 7.97e-15 | 24 |
antibody secreting cell | 8.49e-09 | 1 |
plasma cell | 8.49e-09 | 1 |
plasmablast | 8.49e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
throat | 3.30e-17 | 2 |
open tracheal system trachea | 3.23e-16 | 2 |
intestine | 6.98e-11 | 17 |
penis | 3.88e-09 | 1 |
intromittent organ | 3.88e-09 | 1 |
lateral plate mesenchyme | 3.88e-09 | 1 |
undifferentiated genital tubercle | 3.88e-09 | 1 |
somatopleure | 3.88e-09 | 1 |
tonsil | 4.91e-09 | 1 |
mucosa-associated lymphoid tissue | 4.91e-09 | 1 |
lymphoid tissue | 4.91e-09 | 1 |
tonsillar ring | 4.91e-09 | 1 |
vagina | 5.31e-09 | 1 |
surface | 6.72e-09 | 1 |
colon | 1.51e-08 | 9 |
gastrointestinal system | 1.82e-07 | 25 |
small intestine | 3.25e-07 | 4 |
large intestine | 4.50e-07 | 11 |