FFCP PHASE1:Hg19::chr6:31620191..31620238,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:31620191..31620238,+
|short_description=p1@APOM
|description=CAGE_peak_1_at_APOM_5end
|association_with_transcript=0bp_to_ENST00000375918,ENST00000375920,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55937 | |EntrezGene=55937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13916 | |HGNC=13916 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SRP5,Q5SRP4 | |UniProt=Q5SRP5,Q5SRP4 | ||
|association_with_transcript=0bp_to_ENST00000375918,ENST00000375920,uc003nvk.2_5end | |||
|cluster_id=chr6:31620191..31620238,+ | |||
|description=CAGE_peak_1_at_APOM_5end | |||
|id=chr6:31620191..31620238,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.93e-22!140;CL:0002057!1.40e-21!42;CL:0000860!3.01e-21!45;CL:0000037!1.12e-20!172;CL:0000566!1.12e-20!172;CL:0000988!5.39e-20!182;CL:0002031!6.54e-19!124;CL:0002087!8.55e-19!119;CL:0002032!4.11e-18!165;CL:0000837!4.11e-18!165;CL:0000034!1.28e-16!444;CL:0000048!9.03e-16!430;CL:0000723!8.36e-15!436;CL:0000766!3.63e-14!76;CL:0002320!6.17e-14!365;CL:0000134!5.75e-13!358;CL:0000219!2.18e-12!390;CL:0002009!1.01e-11!65;CL:0000557!2.02e-11!71;CL:0000839!2.50e-11!70;CL:0000763!4.07e-11!112;CL:0000049!4.07e-11!112;CL:0002194!4.69e-11!63;CL:0000576!4.69e-11!63;CL:0000040!4.69e-11!63;CL:0000559!4.69e-11!63;CL:0000003!1.09e-08!722;CL:0000838!1.74e-07!52;CL:0000542!2.77e-07!53;CL:0000051!2.77e-07!53;CL:0002371!5.76e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.10e-16;33!CL:0002057;6.10e-16;33!CL:0000576;3.39e-12;48!CL:0000473;3.17e-09;39!CL:0000234;3.17e-09;39!CL:0000766;1.40e-08;69!CL:0002087;1.31e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.95e-23,136;CL:0000860,3.57e-22,42;CL:0002057,3.57e-22,42;CL:0000037,1.68e-21,168;CL:0000988,4.77e-21,177;CL:0002087,7.10e-20,115;CL:0002031,9.00e-20,120;CL:0002032,7.78e-19,161;CL:0000837,7.78e-19,161;CL:0000034,3.30e-17,441;CL:0000048,2.86e-16,427;CL:0000473,3.67e-16,48;CL:0000234,3.67e-16,48;CL:0000723,2.46e-15,433;CL:0000766,5.95e-15,72;CL:0002320,2.01e-14,361;CL:0000134,2.01e-13,354;CL:0000219,1.20e-12,386;CL:0002009,1.26e-12,61;CL:0000557,4.78e-12,67;CL:0000839,5.92e-12,66;CL:0002194,6.38e-12,59;CL:0000576,6.38e-12,59;CL:0000040,6.38e-12,59;CL:0000559,6.38e-12,59;CL:0000763,1.42e-11,108;CL:0000049,1.42e-11,108;CL:0000838,1.02e-07,52;CL:0000542,1.65e-07,53;CL:0000051,1.65e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.89e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.07e-12!102;UBERON:0003061!1.07e-12!102;UBERON:0002384!1.14e-12!375;UBERON:0002371!2.17e-12!80;UBERON:0002193!6.82e-11!112;UBERON:0001474!4.29e-10!86;UBERON:0002204!3.04e-09!167;UBERON:0004765!6.43e-09!101;UBERON:0001434!6.43e-09!101;UBERON:0002405!7.33e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.44e-13,98;UBERON:0003061,2.44e-13,98;UBERON:0002371,3.53e-13,76;UBERON:0002384,4.55e-13,371;UBERON:0002193,1.96e-11,108;UBERON:0002405,1.08e-10,93;UBERON:0001474,1.27e-10,82;UBERON:0004765,4.46e-10,90;UBERON:0002204,5.95e-10,167;UBERON:0001434,1.32e-09,100 | |||
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| ||
|short_description=p1@APOM | |||
}} | }} |
Latest revision as of 22:52, 17 September 2015
Short description: | p1@APOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APOM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375918, ENST00000375920, uc003nvk.2_5end |
EntrezGene: | APOM |
HGNC: | 13916 |
UniProt: | Q5SRP5Q5SRP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.44e-13 | 98 |
blood island | 2.44e-13 | 98 |
bone marrow | 3.53e-13 | 76 |
connective tissue | 4.55e-13 | 371 |
hemolymphoid system | 1.96e-11 | 108 |
immune system | 1.08e-10 | 93 |
bone element | 1.27e-10 | 82 |
skeletal element | 4.46e-10 | 90 |
musculoskeletal system | 5.95e-10 | 167 |
skeletal system | 1.32e-09 | 100 |