FFCP PHASE1:Hg19::chr11:40315134..40315154,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57689 | |EntrezGene=57689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29317 | |HGNC=29317 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-454bp_to_ENST00000527150_5end | |association_with_transcript=-454bp_to_ENST00000527150_5end | ||
|cluster_id=chr11:40315134..40315154,- | |||
|coexpression_cluster_id=C989 | |||
|description=CAGE_peak_10_at_LRRC4C_5end | |description=CAGE_peak_10_at_LRRC4C_5end | ||
|id=chr11:40315134..40315154,- | |id=chr11:40315134..40315154,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.52e-11;1!UBERON:0006601;1.34e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.86e-64!57;UBERON:0005068!3.86e-64!57;UBERON:0006241!3.86e-64!57;UBERON:0007135!3.86e-64!57;UBERON:0001017!3.75e-54!82;UBERON:0002020!9.97e-54!34;UBERON:0003528!9.97e-54!34;UBERON:0001893!1.88e-53!34;UBERON:0005743!3.68e-53!86;UBERON:0002780!5.08e-53!41;UBERON:0001890!5.08e-53!41;UBERON:0006240!5.08e-53!41;UBERON:0002616!1.29e-52!59;UBERON:0003080!1.54e-51!42;UBERON:0000073!2.43e-51!94;UBERON:0001016!2.43e-51!94;UBERON:0002791!2.67e-51!33;UBERON:0002346!4.46e-50!90;UBERON:0001869!1.52e-49!32;UBERON:0003075!1.16e-48!86;UBERON:0007284!1.16e-48!86;UBERON:0000955!9.70e-48!69;UBERON:0006238!9.70e-48!69;UBERON:0007023!3.57e-42!115;UBERON:0003056!5.47e-39!61;UBERON:0000956!1.69e-35!25;UBERON:0000203!1.69e-35!25;UBERON:0002619!6.78e-34!22;UBERON:0000153!1.94e-30!129;UBERON:0007811!1.94e-30!129;UBERON:0001950!1.01e-29!20;UBERON:0000033!1.10e-29!123;UBERON:0000924!1.31e-29!173;UBERON:0006601!1.31e-29!173;UBERON:0004121!3.45e-28!169;UBERON:0002308!6.87e-20!9;UBERON:0000125!6.87e-20!9;UBERON:0002420!8.39e-20!9;UBERON:0007245!8.39e-20!9;UBERON:0010009!8.39e-20!9;UBERON:0010011!8.39e-20!9;UBERON:0000454!8.39e-20!9;UBERON:0009663!2.00e-15!7;UBERON:0001871!1.83e-14!7;UBERON:0002298!1.38e-13!8;UBERON:0003076!1.94e-13!15;UBERON:0003057!1.94e-13!15;UBERON:0000025!1.58e-12!194;UBERON:0002021!2.42e-12!5;UBERON:0000349!2.59e-12!5;UBERON:0000064!1.03e-10!219;UBERON:0004732!1.71e-10!13;UBERON:0000200!2.95e-10!6;UBERON:0000369!4.67e-10!4;UBERON:0002435!4.67e-10!4;UBERON:0000204!4.67e-10!4;UBERON:0010082!4.67e-10!4;UBERON:0004111!1.33e-09!241;UBERON:0000475!8.72e-09!365;UBERON:0000477!9.01e-09!286;UBERON:0004733!1.08e-08!12;UBERON:0002028!1.08e-08!12;UBERON:0007277!1.08e-08!12;UBERON:0002771!2.53e-08!3;UBERON:0000988!4.22e-08!3;UBERON:0005383!4.22e-08!3;UBERON:0005382!4.22e-08!3;UBERON:0006331!5.96e-08!3;UBERON:0000483!9.15e-08!309;UBERON:0000119!1.44e-07!312;UBERON:0001896!1.71e-07!3;UBERON:0005290!1.71e-07!3;UBERON:0010096!1.71e-07!3;UBERON:0002240!3.16e-07!3;UBERON:0000922!5.55e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.18e-67;22!UBERON:0001950;5.09e-63;20!UBERON:0001869;1.25e-60;32!UBERON:0003528;8.34e-60;34!UBERON:0002020;8.34e-60;34!UBERON:0000956;1.23e-59;25!UBERON:0000203;1.23e-59;25!UBERON:0002791;1.35e-55;32!UBERON:0001893;5.05e-54;34!UBERON:0002780;2.41e-38;41!UBERON:0001890;2.41e-38;41!UBERON:0002021;1.09e-30;5!UBERON:0000073;6.13e-27;53!UBERON:0002616;6.13e-27;53!UBERON:0000200;1.40e-25;6!UBERON:0001871;3.19e-22;6!UBERON:0000955;2.00e-20;68!UBERON:0002771;3.48e-20;2!UBERON:0002148;7.90e-20;2!UBERON:0006331;7.90e-20;2!UBERON:0009662;7.90e-20;2!UBERON:0001017;1.36e-17;75!UBERON:0000125;5.29e-17;9!UBERON:0002308;5.29e-17;9!UBERON:0000988;1.50e-13;3!UBERON:0001870;1.50e-13;3!UBERON:0005383;1.50e-13;3!UBERON:0005382;1.50e-13;3!UBERON:0001016;1.01e-11;83!UBERON:0000941;2.52e-11;1!UBERON:0001785;2.52e-11;1!UBERON:0002464;2.52e-11;1!UBERON:0004904;2.52e-11;1!UBERON:0001021;2.52e-11;1!UBERON:0002022;8.61e-11;1!UBERON:0001874;8.61e-11;1!UBERON:0007190;8.61e-11;1!UBERON:0000369;2.15e-10;4!UBERON:0002435;2.15e-10;4!UBERON:0000204;2.15e-10;4!UBERON:0002420;3.69e-10;9!UBERON:0007245;3.69e-10;9!UBERON:0010009;3.69e-10;9!UBERON:0010011;3.69e-10;9!UBERON:0000454;3.69e-10;9!UBERON:0000349;7.71e-09;5!UBERON:0007023;1.14e-08;114!UBERON:0011216;2.03e-07;132!UBERON:0002298;3.25e-07;6!UBERON:0004732;3.35e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.64e-75,34;UBERON:0002020,1.64e-75,34;UBERON:0001869,1.30e-70,32;UBERON:0002619,2.00e-67,22;UBERON:0001893,1.89e-66,34;UBERON:0001950,8.67e-63,20;UBERON:0002791,5.02e-62,32;UBERON:0000956,1.96e-59,25;UBERON:0000203,1.96e-59,25;UBERON:0002780,5.35e-55,41;UBERON:0001890,5.35e-55,41;UBERON:0003080,5.35e-55,41;UBERON:0006240,5.35e-55,41;UBERON:0000073,4.75e-54,53;UBERON:0002616,4.75e-54,53;UBERON:0001049,4.48e-51,56;UBERON:0005068,4.48e-51,56;UBERON:0006241,4.48e-51,56;UBERON:0007135,4.48e-51,56;UBERON:0000955,4.22e-46,68;UBERON:0006238,4.22e-46,68;UBERON:0003056,1.54e-41,61;UBERON:0003075,1.56e-38,82;UBERON:0007284,1.56e-38,82;UBERON:0001016,1.62e-38,89;UBERON:0001017,1.79e-38,81;UBERON:0002346,1.22e-36,86;UBERON:0002021,3.58e-30,5;UBERON:0010371,6.65e-30,104;UBERON:0000200,1.76e-25,6;UBERON:0007023,2.13e-24,114;UBERON:0010314,4.89e-23,132;UBERON:0001871,4.69e-22,6;UBERON:0002148,2.49e-20,2;UBERON:0006331,2.49e-20,2;UBERON:0009662,2.49e-20,2;UBERON:0002771,4.45e-20,2;UBERON:0004121,4.55e-19,171;UBERON:0000924,4.55e-19,171;UBERON:0006601,4.55e-19,171;UBERON:0000125,3.35e-17,9;UBERON:0002308,3.35e-17,9;UBERON:0011216,6.09e-14,223;UBERON:0000988,6.96e-14,3;UBERON:0001870,1.02e-13,3;UBERON:0005383,1.60e-13,3;UBERON:0005382,1.60e-13,3;UBERON:0000025,3.36e-13,192;UBERON:0000941,2.53e-11,1;UBERON:0001785,2.53e-11,1;UBERON:0002464,2.53e-11,1;UBERON:0004904,2.53e-11,1;UBERON:0001021,2.53e-11,1;UBERON:0003902,2.53e-11,1;UBERON:0005425,2.53e-11,1;UBERON:0002022,7.46e-11,1;UBERON:0001874,9.97e-11,1;UBERON:0007190,1.33e-10,1;UBERON:0000369,2.25e-10,4;UBERON:0002435,2.25e-10,4;UBERON:0000204,2.25e-10,4;UBERON:0010082,2.25e-10,4;UBERON:0002420,3.69e-10,9;UBERON:0007245,3.69e-10,9;UBERON:0010009,3.69e-10,9;UBERON:0010011,3.69e-10,9;UBERON:0000454,3.69e-10,9;UBERON:0004111,5.28e-10,240;UBERON:0000483,1.69e-09,306;UBERON:0000119,2.23e-09,309;UBERON:0000349,7.43e-09,5;UBERON:0002298,2.23e-07,6;UBERON:0004732,2.59e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.508189248444927,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0.994147647766298,3.79807424308384,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0.885741385813839,1.5677537021303,0,0,0,0.87754158861589,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.808813595768125,0.802577647298789,0.937057782901357,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64608069485285,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,3.40508515278939,0,0,0,0,0,1.64023802976667,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,1.80996138906171,1.98348902614035,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,1.34228891392159,1.752673029891,0.573409195690071,0.776503360757966,0.745156835296601,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.706521476061055,1.41696576325585,3.19267718114303,1.02558182120378,1.00828678488687,0.760729777106397,0.645902582527404,4.28308260777463,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,0,1.86018116851066,0.634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0.679697329768317,0.72350050919134,0,0,0,1.41404030924402,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0.596852325484105,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0.297046400327086,0.8453114551668,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,1.08786384305464,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.827463966895162,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.508189248444927,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0.994147647766298,3.79807424308384,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0.885741385813839,1.5677537021303,0,0,0,0.87754158861589,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.808813595768125,0.802577647298789,0.937057782901357,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64608069485285,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,3.40508515278939,0,0,0,0,0,1.64023802976667,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,1.80996138906171,1.98348902614035,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,1.34228891392159,1.752673029891,0.573409195690071,0.776503360757966,0.745156835296601,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.706521476061055,1.41696576325585,3.19267718114303,1.02558182120378,1.00828678488687,0.760729777106397,0.645902582527404,4.28308260777463,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,0,1.86018116851066,0.634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0.679697329768317,0.72350050919134,0,0,0,1.41404030924402,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0.596852325484105,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0.297046400327086,0.8453114551668,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,1.08786384305464,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.827463966895162,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p10@LRRC4C | |short_description=p10@LRRC4C | ||
}} | }} |
Latest revision as of 22:53, 17 September 2015
Short description: | p10@LRRC4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LRRC4C_5end |
Coexpression cluster: | C989_optic_globus_medial_thalamus_spinal_occipital_parietal |
Association with transcript: | -454bp_to_ENST00000527150_5end |
EntrezGene: | LRRC4C |
HGNC: | 29317 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data