FFCP PHASE1:Hg19::chr1:39670444..39670458,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23499 | |EntrezGene=23499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13664 | |HGNC=13664 | ||
|TSSclassifier=strong | |||
|UniProt=B4E2T3 | |UniProt=B4E2T3 | ||
|association_with_transcript=21bp_to_ENST00000536367,uc010oit.1_5end | |association_with_transcript=21bp_to_ENST00000536367,uc010oit.1_5end | ||
|cluster_id=chr1:39670444..39670458,+ | |||
|coexpression_cluster_id=C3979 | |coexpression_cluster_id=C3979 | ||
|description=CAGE_peak_5_at_MACF1_5end | |description=CAGE_peak_5_at_MACF1_5end | ||
|id=chr1:39670444..39670458,+ | |id=chr1:39670444..39670458,+ | ||
|ontology_enrichment_celltype=CL:0000763!8.67e-13!112;CL:0000049!8.67e-13!112;CL:0000048!1.23e-12!430;CL:0000723!2.31e-11!436;CL:0000034!4.10e-11!444;CL:0002320!1.07e-09!365;CL:0000134!1.11e-09!358;CL:0000557!1.42e-08!71;CL:0002057!1.79e-08!42;CL:0000037!2.14e-08!172;CL:0000566!2.14e-08!172;CL:0002032!2.37e-08!165;CL:0000837!2.37e-08!165;CL:0000839!6.31e-08!70;CL:0000988!2.18e-07!182;CL:0000766!3.37e-07!76 | |ontology_enrichment_celltype=CL:0000763!8.67e-13!112;CL:0000049!8.67e-13!112;CL:0000048!1.23e-12!430;CL:0000723!2.31e-11!436;CL:0000034!4.10e-11!444;CL:0002320!1.07e-09!365;CL:0000134!1.11e-09!358;CL:0000557!1.42e-08!71;CL:0002057!1.79e-08!42;CL:0000037!2.14e-08!172;CL:0000566!2.14e-08!172;CL:0002032!2.37e-08!165;CL:0000837!2.37e-08!165;CL:0000839!6.31e-08!70;CL:0000988!2.18e-07!182;CL:0000766!3.37e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.43e-10;33!CL:0002057;4.43e-10;33!CL:0000473;1.41e-07;39!CL:0000234;1.41e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.25e-13,108;CL:0000049,1.25e-13,108;CL:0000048,1.03e-12,427;CL:0000723,1.40e-11,433;CL:0000034,3.03e-11,441;CL:0002320,5.37e-10,361;CL:0000134,5.66e-10,354;CL:0000557,1.29e-09,67;CL:0000839,7.41e-09,66;CL:0000860,1.39e-08,42;CL:0002057,1.39e-08,42;CL:0000766,2.16e-08,72;CL:0000037,2.72e-08,168;CL:0002032,4.08e-08,161;CL:0000837,4.08e-08,161;CL:0000473,5.20e-08,48;CL:0000234,5.20e-08,48;CL:0002194,1.77e-07,59;CL:0000576,1.77e-07,59;CL:0000040,1.77e-07,59;CL:0000559,1.77e-07,59;CL:0000988,3.78e-07,177;CL:0002009,6.23e-07,61;CL:0000219,6.66e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;9.41e-07;42 | |||
|ontology_enrichment_disease=DOID:8692!2.27e-08!31;DOID:1240!7.18e-07!39 | |ontology_enrichment_disease=DOID:8692!2.27e-08!31;DOID:1240!7.18e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.18e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.28e-08,31;DOID:1240,6.74e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002204!8.43e-13!167;UBERON:0002384!4.79e-10!375;UBERON:0002371!7.10e-09!80;UBERON:0001474!1.67e-08!86;UBERON:0004765!2.93e-08!101;UBERON:0001434!2.93e-08!101;UBERON:0002390!1.79e-07!102;UBERON:0003061!1.79e-07!102;UBERON:0003081!2.82e-07!216 | |ontology_enrichment_uberon=UBERON:0002204!8.43e-13!167;UBERON:0002384!4.79e-10!375;UBERON:0002371!7.10e-09!80;UBERON:0001474!1.67e-08!86;UBERON:0004765!2.93e-08!101;UBERON:0001434!2.93e-08!101;UBERON:0002390!1.79e-07!102;UBERON:0003061!1.79e-07!102;UBERON:0003081!2.82e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.47e-12,167;UBERON:0002384,2.69e-10,371;UBERON:0002371,7.29e-10,76;UBERON:0000926,4.25e-09,315;UBERON:0004120,4.25e-09,315;UBERON:0006603,4.25e-09,315;UBERON:0001474,4.34e-09,82;UBERON:0003081,1.11e-08,203;UBERON:0004765,1.55e-08,90;UBERON:0001434,1.83e-08,100;UBERON:0002390,5.20e-08,98;UBERON:0003061,5.20e-08,98;UBERON:0002405,5.78e-07,93 | |||
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| ||
|short_description=p5@MACF1 | |short_description=p5@MACF1 | ||
}} | }} |
Latest revision as of 23:31, 17 September 2015
Short description: | p5@MACF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MACF1_5end |
Coexpression cluster: | C3979_Mast_acute_chronic_granulocyte_Fibroblast_mesodermal_epithelioid |
Association with transcript: | 21bp_to_ENST00000536367, uc010oit.1_5end |
EntrezGene: | MACF1 |
HGNC: | 13664 |
UniProt: | B4E2T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.25e-13 | 108 |
common myeloid progenitor | 1.25e-13 | 108 |
multi fate stem cell | 1.03e-12 | 427 |
somatic stem cell | 1.40e-11 | 433 |
stem cell | 3.03e-11 | 441 |
connective tissue cell | 5.37e-10 | 361 |
mesenchymal cell | 5.66e-10 | 354 |
granulocyte monocyte progenitor cell | 1.29e-09 | 67 |
myeloid lineage restricted progenitor cell | 7.41e-09 | 66 |
classical monocyte | 1.39e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-08 | 42 |
myeloid leukocyte | 2.16e-08 | 72 |
hematopoietic stem cell | 2.72e-08 | 168 |
hematopoietic oligopotent progenitor cell | 4.08e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-08 | 161 |
defensive cell | 5.20e-08 | 48 |
phagocyte | 5.20e-08 | 48 |
monopoietic cell | 1.77e-07 | 59 |
monocyte | 1.77e-07 | 59 |
monoblast | 1.77e-07 | 59 |
promonocyte | 1.77e-07 | 59 |
hematopoietic cell | 3.78e-07 | 177 |
macrophage dendritic cell progenitor | 6.23e-07 | 61 |
motile cell | 6.66e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.47e-12 | 167 |
connective tissue | 2.69e-10 | 371 |
bone marrow | 7.29e-10 | 76 |
mesoderm | 4.25e-09 | 315 |
mesoderm-derived structure | 4.25e-09 | 315 |
presumptive mesoderm | 4.25e-09 | 315 |
bone element | 4.34e-09 | 82 |
lateral plate mesoderm | 1.11e-08 | 203 |
skeletal element | 1.55e-08 | 90 |
skeletal system | 1.83e-08 | 100 |
hematopoietic system | 5.20e-08 | 98 |
blood island | 5.20e-08 | 98 |
immune system | 5.78e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.28e-08 | 31 |
leukemia | 6.74e-07 | 39 |