FFCP PHASE1:Hg19::chr9:8501305..8501323,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:8501305..8501323,- to FFCP PHASE1:Hg19::chr9:8501305..8501323,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5789 | |EntrezGene=5789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9668 | |HGNC=9668 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-246bp_to_ENST00000471274_5end | |||
|cluster_id=chr9:8501305..8501323,- | |||
|coexpression_cluster_id=C3205 | |||
|description=CAGE_peak_19_at_PTPRD_5end | |||
|id=chr9:8501305..8501323,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.88e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.04e-68!57;UBERON:0005068!3.04e-68!57;UBERON:0006241!3.04e-68!57;UBERON:0007135!3.04e-68!57;UBERON:0002616!3.44e-55!59;UBERON:0002020!7.97e-53!34;UBERON:0003528!7.97e-53!34;UBERON:0001893!4.42e-52!34;UBERON:0001017!2.34e-51!82;UBERON:0002791!7.17e-50!33;UBERON:0002780!2.70e-49!41;UBERON:0001890!2.70e-49!41;UBERON:0006240!2.70e-49!41;UBERON:0005743!1.78e-48!86;UBERON:0003080!6.00e-48!42;UBERON:0000955!9.11e-48!69;UBERON:0006238!9.11e-48!69;UBERON:0001869!1.79e-47!32;UBERON:0003075!2.38e-46!86;UBERON:0007284!2.38e-46!86;UBERON:0000073!2.20e-45!94;UBERON:0001016!2.20e-45!94;UBERON:0002346!8.51e-44!90;UBERON:0002619!2.71e-40!22;UBERON:0007023!8.72e-36!115;UBERON:0001950!4.72e-35!20;UBERON:0000956!5.22e-35!25;UBERON:0000203!5.22e-35!25;UBERON:0003056!6.89e-33!61;UBERON:0000033!1.78e-25!123;UBERON:0000153!8.27e-24!129;UBERON:0007811!8.27e-24!129;UBERON:0004121!1.56e-21!169;UBERON:0000924!8.95e-21!173;UBERON:0006601!8.95e-21!173;UBERON:0003076!1.23e-20!15;UBERON:0003057!1.23e-20!15;UBERON:0000025!1.56e-19!194;UBERON:0002308!1.86e-19!9;UBERON:0000125!1.86e-19!9;UBERON:0002420!2.89e-19!9;UBERON:0007245!2.89e-19!9;UBERON:0010009!2.89e-19!9;UBERON:0010011!2.89e-19!9;UBERON:0000454!2.89e-19!9;UBERON:0001871!6.09e-17!7;UBERON:0004732!2.48e-16!13;UBERON:0002298!2.71e-16!8;UBERON:0000349!2.22e-14!5;UBERON:0004111!3.07e-14!241;UBERON:0009663!3.24e-14!7;UBERON:0004733!6.56e-14!12;UBERON:0002028!6.56e-14!12;UBERON:0007277!6.56e-14!12;UBERON:0001872!1.03e-13!5;UBERON:0000477!1.40e-11!286;UBERON:0000064!1.64e-11!219;UBERON:0000200!2.19e-11!6;UBERON:0000483!3.65e-11!309;UBERON:0000119!6.14e-11!312;UBERON:0002771!1.40e-09!3;UBERON:0006331!1.44e-09!3;UBERON:0002240!3.63e-09!3;UBERON:0000988!4.92e-09!3;UBERON:0001896!5.80e-09!3;UBERON:0005290!5.80e-09!3;UBERON:0010096!5.80e-09!3;UBERON:0000475!3.57e-08!365;UBERON:0002680!8.52e-08!9;UBERON:0001895!8.52e-08!9;UBERON:0010092!8.52e-08!9;UBERON:0001875!3.13e-07!2;UBERON:0006514!3.13e-07!2;UBERON:0001954!4.08e-07!2;UBERON:0003022!4.08e-07!2;UBERON:0002421!4.08e-07!2;UBERON:0002600!4.08e-07!2;UBERON:0002148!4.58e-07!2;UBERON:0009662!4.58e-07!2;UBERON:0001897!7.46e-07!2;UBERON:0001876!7.67e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.11e-36;34!UBERON:0002020;2.11e-36;34!UBERON:0002619;6.00e-30;22!UBERON:0002791;1.52e-26;32!UBERON:0001869;1.82e-26;32!UBERON:0000956;2.09e-26;25!UBERON:0000203;2.09e-26;25!UBERON:0000073;4.84e-25;53!UBERON:0002616;4.84e-25;53!UBERON:0001875;3.30e-23;2!UBERON:0006514;3.30e-23;2!UBERON:0002771;7.63e-23;2!UBERON:0001954;7.63e-23;2!UBERON:0002148;7.63e-23;2!UBERON:0006331;7.63e-23;2!UBERON:0009662;7.63e-23;2!UBERON:0003022;7.63e-23;2!UBERON:0002421;7.63e-23;2!UBERON:0002600;7.63e-23;2!UBERON:0001893;1.30e-22;34!UBERON:0002780;3.99e-22;41!UBERON:0001890;3.99e-22;41!UBERON:0004732;2.68e-21;13!UBERON:0000125;7.20e-20;9!UBERON:0002308;7.20e-20;9!UBERON:0001950;8.85e-19;20!UBERON:0002298;5.01e-17;6!UBERON:0001017;1.04e-15;75!UBERON:0000988;1.42e-15;3!UBERON:0004733;5.60e-15;12!UBERON:0002028;5.60e-15;12!UBERON:0001016;2.39e-14;83!UBERON:0000955;4.97e-13;68!UBERON:0000941;7.88e-13;1!UBERON:0001785;7.88e-13;1!UBERON:0002464;7.88e-13;1!UBERON:0004904;7.88e-13;1!UBERON:0001021;7.88e-13;1!UBERON:0002680;1.13e-11;9!UBERON:0001895;1.13e-11;9!UBERON:0002021;4.55e-10;5!UBERON:0001872;6.36e-10;5!UBERON:0000349;1.01e-09;5!UBERON:0000200;3.02e-08;6!UBERON:0009663;2.73e-07;7!UBERON:0001871;3.45e-07;6!UBERON:0003714;4.82e-07;2!UBERON:0005162;4.82e-07;2!UBERON:0000122;4.82e-07;2!UBERON:0001897;8.76e-07;2!UBERON:0010225;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.09e-47,56;UBERON:0005068,2.09e-47,56;UBERON:0006241,2.09e-47,56;UBERON:0007135,2.09e-47,56;UBERON:0000073,6.10e-44,53;UBERON:0002616,6.10e-44,53;UBERON:0003528,6.73e-44,34;UBERON:0002020,6.73e-44,34;UBERON:0003075,2.32e-36,82;UBERON:0007284,2.32e-36,82;UBERON:0002346,1.34e-34,86;UBERON:0000955,1.79e-33,68;UBERON:0006238,1.79e-33,68;UBERON:0001016,1.31e-32,89;UBERON:0002791,2.05e-32,32;UBERON:0001869,2.05e-32,32;UBERON:0001017,5.93e-32,81;UBERON:0001893,1.70e-30,34;UBERON:0002780,1.92e-30,41;UBERON:0001890,1.92e-30,41;UBERON:0003080,1.92e-30,41;UBERON:0006240,1.92e-30,41;UBERON:0002619,4.51e-30,22;UBERON:0010371,2.54e-28,104;UBERON:0000956,1.63e-26,25;UBERON:0000203,1.63e-26,25;UBERON:0003056,3.62e-24,61;UBERON:0001875,1.99e-23,2;UBERON:0006514,1.99e-23,2;UBERON:0001954,5.47e-23,2;UBERON:0003022,5.47e-23,2;UBERON:0002421,5.47e-23,2;UBERON:0002600,5.47e-23,2;UBERON:0002148,8.55e-23,2;UBERON:0006331,8.55e-23,2;UBERON:0009662,8.55e-23,2;UBERON:0002771,9.56e-23,2;UBERON:0010314,6.39e-22,132;UBERON:0004732,3.39e-21,13;UBERON:0000125,6.08e-20,9;UBERON:0002308,6.08e-20,9;UBERON:0007023,9.63e-20,114;UBERON:0001950,7.70e-19,20;UBERON:0003076,3.25e-18,15;UBERON:0003057,3.25e-18,15;UBERON:0002298,6.42e-17,6;UBERON:0004121,3.01e-16,171;UBERON:0000924,3.01e-16,171;UBERON:0006601,3.01e-16,171;UBERON:0000988,1.53e-15,3;UBERON:0004733,6.84e-15,12;UBERON:0002028,6.84e-15,12;UBERON:0007277,6.84e-15,12;UBERON:0011216,1.29e-13,223;UBERON:0000941,7.89e-13,1;UBERON:0001785,7.89e-13,1;UBERON:0002464,7.89e-13,1;UBERON:0004904,7.89e-13,1;UBERON:0001021,7.89e-13,1;UBERON:0003902,7.89e-13,1;UBERON:0005425,7.89e-13,1;UBERON:0000025,1.52e-12,192;UBERON:0002680,1.22e-11,9;UBERON:0001895,1.22e-11,9;UBERON:0010092,1.22e-11,9;UBERON:0002021,4.55e-10,5;UBERON:0001872,4.76e-10,5;UBERON:0000349,8.88e-10,5;UBERON:0004111,1.35e-09,240;UBERON:0000200,3.25e-08,6;UBERON:0000483,3.30e-08,306;UBERON:0000119,4.18e-08,309;UBERON:0009663,2.37e-07,7;UBERON:0001871,3.68e-07,6;UBERON:0003714,4.83e-07,2;UBERON:0005162,4.83e-07,2;UBERON:0000122,4.83e-07,2 | |||
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| ||
|short_description=p19@PTPRD | |||
}} | }} |
Latest revision as of 23:49, 17 September 2015
Short description: | p19@PTPRD |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PTPRD_5end |
Coexpression cluster: | C3205_optic_occipital_parietal_middle_hippocampus_amygdala_temporal |
Association with transcript: | -246bp_to_ENST00000471274_5end |
EntrezGene: | PTPRD |
HGNC: | 9668 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data