FFCP PHASE1:Hg19::chr1:40505891..40505929,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10487 | |EntrezGene=10487 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20040 | |HGNC=20040 | ||
|TSSclassifier=strong | |||
|UniProt=Q01518 | |UniProt=Q01518 | ||
|association_with_transcript=0bp_to_ENST00000372797,ENST00000372802_5end | |association_with_transcript=0bp_to_ENST00000372797,ENST00000372802_5end | ||
|cluster_id=chr1:40505891..40505929,+ | |||
|description=CAGE_peak_6_at_CAP1_5end | |description=CAGE_peak_6_at_CAP1_5end | ||
|id=chr1:40505891..40505929,+ | |id=chr1:40505891..40505929,+ | ||
|ontology_enrichment_celltype=CL:0002194!6.17e-19!63;CL:0000576!6.17e-19!63;CL:0000040!6.17e-19!63;CL:0000559!6.17e-19!63;CL:0000839!1.88e-18!70;CL:0000557!3.68e-18!71;CL:0002009!9.77e-18!65;CL:0000766!9.63e-17!76;CL:0000048!4.81e-14!430;CL:0000723!8.61e-14!436;CL:0002371!5.71e-13!591;CL:0000144!6.82e-13!625;CL:0000034!7.92e-13!444;CL:0002057!3.21e-11!42;CL:0000860!5.06e-11!45;CL:0000134!5.95e-11!358;CL:0000003!1.62e-10!722;CL:0000763!2.88e-10!112;CL:0000049!2.88e-10!112;CL:0000548!5.13e-10!679;CL:0000004!5.13e-10!679;CL:0000255!5.13e-10!679;CL:0000012!6.76e-10!682;CL:0002320!1.46e-09!365;CL:0000359!4.34e-08!32;CL:0000219!5.43e-08!390;CL:0000063!8.48e-08!578 | |ontology_enrichment_celltype=CL:0002194!6.17e-19!63;CL:0000576!6.17e-19!63;CL:0000040!6.17e-19!63;CL:0000559!6.17e-19!63;CL:0000839!1.88e-18!70;CL:0000557!3.68e-18!71;CL:0002009!9.77e-18!65;CL:0000766!9.63e-17!76;CL:0000048!4.81e-14!430;CL:0000723!8.61e-14!436;CL:0002371!5.71e-13!591;CL:0000144!6.82e-13!625;CL:0000034!7.92e-13!444;CL:0002057!3.21e-11!42;CL:0000860!5.06e-11!45;CL:0000134!5.95e-11!358;CL:0000003!1.62e-10!722;CL:0000763!2.88e-10!112;CL:0000049!2.88e-10!112;CL:0000548!5.13e-10!679;CL:0000004!5.13e-10!679;CL:0000255!5.13e-10!679;CL:0000012!6.76e-10!682;CL:0002320!1.46e-09!365;CL:0000359!4.34e-08!32;CL:0000219!5.43e-08!390;CL:0000063!8.48e-08!578 | ||
|ontology_enrichment_celltype_v019=CL:0000473;7.30e-12;39!CL:0000234;7.30e-12;39!CL:0000576;1.29e-11;48!CL:0000359;8.22e-10;32!CL:0000860;8.99e-10;33!CL:0002057;8.99e-10;33!CL:0000766;1.72e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,6.95e-24,59;CL:0000576,6.95e-24,59;CL:0000040,6.95e-24,59;CL:0000559,6.95e-24,59;CL:0000839,1.53e-23,66;CL:0000557,6.97e-23,67;CL:0002009,1.82e-22,61;CL:0000766,1.18e-20,72;CL:0000473,8.53e-18,48;CL:0000234,8.53e-18,48;CL:0000723,5.94e-15,433;CL:0000048,7.96e-15,427;CL:0000034,3.96e-14,441;CL:0000860,2.08e-13,42;CL:0002057,2.08e-13,42;CL:0000763,4.80e-11,108;CL:0000049,4.80e-11,108;CL:0000359,2.83e-10,32;CL:0000134,4.16e-10,354;CL:0002320,3.36e-09,361;CL:0002031,1.12e-07,120;CL:0000219,2.23e-07,386;CL:0002087,7.60e-07,115;CL:0000192,8.30e-07,43;CL:0000514,8.30e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.43e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.46e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!7.50e-17!80;UBERON:0003081!3.79e-16!216;UBERON:0002390!3.58e-15!102;UBERON:0003061!3.58e-15!102;UBERON:0002204!3.76e-15!167;UBERON:0004765!1.14e-14!101;UBERON:0001434!1.14e-14!101;UBERON:0001474!3.49e-14!86;UBERON:0002193!1.29e-13!112;UBERON:0002405!2.54e-10!115;UBERON:0000926!9.76e-10!448;UBERON:0004120!9.76e-10!448;UBERON:0006603!9.76e-10!448;UBERON:0002384!2.70e-09!375 | |ontology_enrichment_uberon=UBERON:0002371!7.50e-17!80;UBERON:0003081!3.79e-16!216;UBERON:0002390!3.58e-15!102;UBERON:0003061!3.58e-15!102;UBERON:0002204!3.76e-15!167;UBERON:0004765!1.14e-14!101;UBERON:0001434!1.14e-14!101;UBERON:0001474!3.49e-14!86;UBERON:0002193!1.29e-13!112;UBERON:0002405!2.54e-10!115;UBERON:0000926!9.76e-10!448;UBERON:0004120!9.76e-10!448;UBERON:0006603!9.76e-10!448;UBERON:0002384!2.70e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.27e-21,203;UBERON:0002371,2.40e-20,76;UBERON:0000926,1.50e-19,315;UBERON:0004120,1.50e-19,315;UBERON:0006603,1.50e-19,315;UBERON:0002204,4.76e-18,167;UBERON:0002390,1.44e-17,98;UBERON:0003061,1.44e-17,98;UBERON:0001474,2.27e-17,82;UBERON:0004765,3.09e-17,90;UBERON:0002193,7.03e-16,108;UBERON:0002405,7.79e-16,93;UBERON:0001434,1.69e-15,100;UBERON:0002384,4.44e-09,371 | |||
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| ||
|short_description=p6@CAP1 | |short_description=p6@CAP1 | ||
}} | }} |
Latest revision as of 00:36, 18 September 2015
Short description: | p6@CAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372797, ENST00000372802_5end |
EntrezGene: | CAP1 |
HGNC: | 20040 |
UniProt: | Q01518 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 6.95e-24 | 59 |
monocyte | 6.95e-24 | 59 |
monoblast | 6.95e-24 | 59 |
promonocyte | 6.95e-24 | 59 |
myeloid lineage restricted progenitor cell | 1.53e-23 | 66 |
granulocyte monocyte progenitor cell | 6.97e-23 | 67 |
macrophage dendritic cell progenitor | 1.82e-22 | 61 |
myeloid leukocyte | 1.18e-20 | 72 |
defensive cell | 8.53e-18 | 48 |
phagocyte | 8.53e-18 | 48 |
somatic stem cell | 5.94e-15 | 433 |
multi fate stem cell | 7.96e-15 | 427 |
stem cell | 3.96e-14 | 441 |
classical monocyte | 2.08e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.08e-13 | 42 |
myeloid cell | 4.80e-11 | 108 |
common myeloid progenitor | 4.80e-11 | 108 |
vascular associated smooth muscle cell | 2.83e-10 | 32 |
mesenchymal cell | 4.16e-10 | 354 |
connective tissue cell | 3.36e-09 | 361 |
hematopoietic lineage restricted progenitor cell | 1.12e-07 | 120 |
motile cell | 2.23e-07 | 386 |
nongranular leukocyte | 7.60e-07 | 115 |
smooth muscle cell | 8.30e-07 | 43 |
smooth muscle myoblast | 8.30e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 5.27e-21 | 203 |
bone marrow | 2.40e-20 | 76 |
mesoderm | 1.50e-19 | 315 |
mesoderm-derived structure | 1.50e-19 | 315 |
presumptive mesoderm | 1.50e-19 | 315 |
musculoskeletal system | 4.76e-18 | 167 |
hematopoietic system | 1.44e-17 | 98 |
blood island | 1.44e-17 | 98 |
bone element | 2.27e-17 | 82 |
skeletal element | 3.09e-17 | 90 |
hemolymphoid system | 7.03e-16 | 108 |
immune system | 7.79e-16 | 93 |
skeletal system | 1.69e-15 | 100 |
connective tissue | 4.44e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.46e-08 | 14 |