FFCP PHASE1:Hg19::chr1:40506327..40506338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10487 | |EntrezGene=10487 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20040 | |HGNC=20040 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T0S3 | |UniProt=Q5T0S3 | ||
|association_with_transcript=-53bp_to_ENST00000414893_5end | |association_with_transcript=-53bp_to_ENST00000414893_5end | ||
|cluster_id=chr1:40506327..40506338,+ | |||
|coexpression_cluster_id=C1580 | |coexpression_cluster_id=C1580 | ||
|description=CAGE_peak_5_at_CAP1_5end | |description=CAGE_peak_5_at_CAP1_5end | ||
|id=chr1:40506327..40506338,+ | |id=chr1:40506327..40506338,+ | ||
|ontology_enrichment_celltype=CL:0000766!4.08e-28!76;CL:0002194!3.47e-25!63;CL:0000576!3.47e-25!63;CL:0000040!3.47e-25!63;CL:0000559!3.47e-25!63;CL:0002057!3.66e-25!42;CL:0002009!4.52e-24!65;CL:0000839!1.42e-21!70;CL:0000860!1.70e-21!45;CL:0000557!2.44e-21!71;CL:0000763!2.93e-20!112;CL:0000049!2.93e-20!112;CL:0002371!7.21e-11!591;CL:0000144!8.22e-10!625;CL:0000048!1.20e-09!430;CL:0000723!1.70e-09!436;CL:0000034!8.56e-09!444;CL:0002139!2.78e-08!24;CL:0000115!5.50e-08!35 | |ontology_enrichment_celltype=CL:0000766!4.08e-28!76;CL:0002194!3.47e-25!63;CL:0000576!3.47e-25!63;CL:0000040!3.47e-25!63;CL:0000559!3.47e-25!63;CL:0002057!3.66e-25!42;CL:0002009!4.52e-24!65;CL:0000839!1.42e-21!70;CL:0000860!1.70e-21!45;CL:0000557!2.44e-21!71;CL:0000763!2.93e-20!112;CL:0000049!2.93e-20!112;CL:0002371!7.21e-11!591;CL:0000144!8.22e-10!625;CL:0000048!1.20e-09!430;CL:0000723!1.70e-09!436;CL:0000034!8.56e-09!444;CL:0002139!2.78e-08!24;CL:0000115!5.50e-08!35 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.53e-21;33!CL:0002057;6.53e-21;33!CL:0000576;1.97e-20;48!CL:0000473;4.82e-19;39!CL:0000234;4.82e-19;39!CL:0000766;9.71e-15;69!CL:0002139;1.05e-09;24!CL:0000115;1.46e-08;36!CL:0000763;6.41e-08;100!CL:0000071;2.24e-07;18!CL:0000094;6.17e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.56e-33,72;CL:0002194,2.67e-31,59;CL:0000576,2.67e-31,59;CL:0000040,2.67e-31,59;CL:0000559,2.67e-31,59;CL:0002009,2.72e-30,61;CL:0000473,1.91e-29,48;CL:0000234,1.91e-29,48;CL:0000860,5.95e-28,42;CL:0002057,5.95e-28,42;CL:0000557,5.00e-26,67;CL:0000839,6.50e-26,66;CL:0000763,5.16e-22,108;CL:0000049,5.16e-22,108;CL:0000048,8.53e-12,427;CL:0000723,9.62e-12,433;CL:0000034,5.84e-11,441;CL:0000115,1.85e-09,36;CL:0002139,1.96e-09,24;CL:0000134,1.06e-08,354;CL:0000738,1.04e-07,136;CL:0002320,1.07e-07,361;CL:0000071,4.08e-07,18;CL:0002546,4.08e-07,18;CL:0000094,8.18e-07,8;CL:0002393,9.36e-07,9;CL:0002397,9.36e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.00e-20;42!CL:0000049;1.45e-07;108!CL:0002546;2.24e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.79e-25!216;UBERON:0002193!5.05e-23!112;UBERON:0002390!3.35e-21!102;UBERON:0003061!3.35e-21!102;UBERON:0002371!1.30e-19!80;UBERON:0001474!4.67e-17!86;UBERON:0004765!1.17e-16!101;UBERON:0001434!1.17e-16!101;UBERON:0002204!2.05e-16!167;UBERON:0002405!5.00e-14!115;UBERON:0000055!2.03e-13!69;UBERON:0004535!3.17e-13!110;UBERON:0001981!1.37e-12!60;UBERON:0007500!1.37e-12!60;UBERON:0004537!1.37e-12!60;UBERON:0006965!1.37e-12!60;UBERON:0000926!2.61e-12!448;UBERON:0004120!2.61e-12!448;UBERON:0006603!2.61e-12!448;UBERON:0001009!2.61e-12!113;UBERON:0002049!3.18e-11!79;UBERON:0007798!3.18e-11!79;UBERON:0001637!3.83e-09!42;UBERON:0003509!3.83e-09!42;UBERON:0004572!3.83e-09!42;UBERON:0004872!4.22e-09!84;UBERON:0000467!1.00e-08!625;UBERON:0000480!1.85e-08!626 | |ontology_enrichment_uberon=UBERON:0003081!6.79e-25!216;UBERON:0002193!5.05e-23!112;UBERON:0002390!3.35e-21!102;UBERON:0003061!3.35e-21!102;UBERON:0002371!1.30e-19!80;UBERON:0001474!4.67e-17!86;UBERON:0004765!1.17e-16!101;UBERON:0001434!1.17e-16!101;UBERON:0002204!2.05e-16!167;UBERON:0002405!5.00e-14!115;UBERON:0000055!2.03e-13!69;UBERON:0004535!3.17e-13!110;UBERON:0001981!1.37e-12!60;UBERON:0007500!1.37e-12!60;UBERON:0004537!1.37e-12!60;UBERON:0006965!1.37e-12!60;UBERON:0000926!2.61e-12!448;UBERON:0004120!2.61e-12!448;UBERON:0006603!2.61e-12!448;UBERON:0001009!2.61e-12!113;UBERON:0002049!3.18e-11!79;UBERON:0007798!3.18e-11!79;UBERON:0001637!3.83e-09!42;UBERON:0003509!3.83e-09!42;UBERON:0004572!3.83e-09!42;UBERON:0004872!4.22e-09!84;UBERON:0000467!1.00e-08!625;UBERON:0000480!1.85e-08!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0007500;1.99e-07;56!UBERON:0001981;1.99e-07;56!UBERON:0004537;1.99e-07;56!UBERON:0004638;2.24e-07;18!UBERON:0001986;2.24e-07;18!UBERON:0004852;2.24e-07;18!UBERON:0000055;2.40e-07;65!UBERON:0001637;2.42e-07;42!UBERON:0003509;2.42e-07;42!UBERON:0004572;2.42e-07;42 | |||
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| ||
|short_description=p5@CAP1 | |short_description=p5@CAP1 | ||
}} | }} |
Latest revision as of 00:39, 18 September 2015
Short description: | p5@CAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CAP1_5end |
Coexpression cluster: | C1580_acute_Neutrophils_Mallassezderived_migratory_Smooth_Preadipocyte_small |
Association with transcript: | -53bp_to_ENST00000414893_5end |
EntrezGene: | CAP1 |
HGNC: | 20040 |
UniProt: | Q5T0S3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.56e-33 | 72 |
monopoietic cell | 2.67e-31 | 59 |
monocyte | 2.67e-31 | 59 |
monoblast | 2.67e-31 | 59 |
promonocyte | 2.67e-31 | 59 |
macrophage dendritic cell progenitor | 2.72e-30 | 61 |
defensive cell | 1.91e-29 | 48 |
phagocyte | 1.91e-29 | 48 |
classical monocyte | 5.95e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.95e-28 | 42 |
granulocyte monocyte progenitor cell | 5.00e-26 | 67 |
myeloid lineage restricted progenitor cell | 6.50e-26 | 66 |
myeloid cell | 5.16e-22 | 108 |
common myeloid progenitor | 5.16e-22 | 108 |
multi fate stem cell | 8.53e-12 | 427 |
somatic stem cell | 9.62e-12 | 433 |
stem cell | 5.84e-11 | 441 |
endothelial cell | 1.85e-09 | 36 |
endothelial cell of vascular tree | 1.96e-09 | 24 |
mesenchymal cell | 1.06e-08 | 354 |
leukocyte | 1.04e-07 | 136 |
connective tissue cell | 1.07e-07 | 361 |
blood vessel endothelial cell | 4.08e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.08e-07 | 18 |
granulocyte | 8.18e-07 | 8 |
intermediate monocyte | 9.36e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.36e-07 | 9 |