FFCP PHASE1:Hg19::chr12:28343807..28343835,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=729291 | |EntrezGene=729291 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-136bp_to_BC048978_5end | |association_with_transcript=-136bp_to_BC048978_5end | ||
|cluster_id=chr12:28343807..28343835,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_1_at_LOC729291_5end | |description=CAGE_peak_1_at_LOC729291_5end | ||
|id=chr12:28343807..28343835,- | |id=chr12:28343807..28343835,- | ||
|ontology_enrichment_celltype=CL:0002057!2.99e-18!42;CL:0000860!4.06e-16!45;CL:0000738!4.29e-14!140;CL:0002031!1.46e-13!124;CL:0002087!8.20e-13!119;CL:0000557!2.18e-10!71;CL:0000839!4.92e-10!70;CL:0002009!7.90e-10!65;CL:0000766!1.16e-09!76;CL:0002194!2.28e-09!63;CL:0000576!2.28e-09!63;CL:0000040!2.28e-09!63;CL:0000559!2.28e-09!63;CL:0000037!1.37e-07!172;CL:0000566!1.37e-07!172;CL:0000988!5.47e-07!182 | |ontology_enrichment_celltype=CL:0002057!2.99e-18!42;CL:0000860!4.06e-16!45;CL:0000738!4.29e-14!140;CL:0002031!1.46e-13!124;CL:0002087!8.20e-13!119;CL:0000557!2.18e-10!71;CL:0000839!4.92e-10!70;CL:0002009!7.90e-10!65;CL:0000766!1.16e-09!76;CL:0002194!2.28e-09!63;CL:0000576!2.28e-09!63;CL:0000040!2.28e-09!63;CL:0000559!2.28e-09!63;CL:0000037!1.37e-07!172;CL:0000566!1.37e-07!172;CL:0000988!5.47e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.02e-14;33!CL:0002057;2.02e-14;33!CL:0000576;5.39e-12;48!CL:0000473;2.15e-10;39!CL:0000234;2.15e-10;39!CL:0000766;8.43e-10;69!CL:0002087;1.67e-09;104!CL:0000624;1.08e-08;6!CL:0000236;5.93e-07;13!CL:0002393;7.55e-07;6!CL:0002397;7.55e-07;6!CL:0000791;9.82e-07;18!CL:0000789;9.82e-07;18!CL:0002419;9.82e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.13e-26,136;CL:0002087,1.58e-24,115;CL:0000860,2.67e-24,42;CL:0002057,2.67e-24,42;CL:0002031,8.55e-24,120;CL:0000473,8.95e-21,48;CL:0000234,8.95e-21,48;CL:0000037,5.67e-18,168;CL:0000766,3.38e-17,72;CL:0000557,5.28e-17,67;CL:0000988,1.37e-16,177;CL:0002009,2.14e-16,61;CL:0000839,2.14e-16,66;CL:0002194,2.96e-16,59;CL:0000576,2.96e-16,59;CL:0000040,2.96e-16,59;CL:0000559,2.96e-16,59;CL:0002032,2.79e-15,161;CL:0000837,2.79e-15,161;CL:0002393,6.57e-10,9;CL:0002397,6.57e-10,9;CL:0000624,1.11e-08,6;CL:0000763,2.16e-08,108;CL:0000049,2.16e-08,108;CL:0000838,6.68e-08,52;CL:0002320,7.03e-08,361;CL:0000542,1.30e-07,53;CL:0000051,1.30e-07,53;CL:0000134,1.38e-07,354;CL:0000236,8.56e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;9.46e-18;42!CL:0000790;9.82e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.05e-09!102;UBERON:0003061!1.05e-09!102;UBERON:0002371!1.20e-09!80;UBERON:0001474!2.42e-09!86;UBERON:0004765!3.28e-09!101;UBERON:0001434!3.28e-09!101;UBERON:0007023!1.27e-08!115;UBERON:0002193!7.88e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.30e-16,76;UBERON:0002390,2.10e-15,98;UBERON:0003061,2.10e-15,98;UBERON:0001474,7.12e-15,82;UBERON:0004765,2.12e-14,90;UBERON:0001434,1.52e-13,100;UBERON:0002405,4.04e-13,93;UBERON:0002193,1.53e-12,108;UBERON:0002204,3.65e-08,167;UBERON:0002384,1.18e-07,371 | |||
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| ||
|short_description=p1@LOC729291 | |short_description=p1@LOC729291 | ||
}} | }} |
Latest revision as of 01:04, 18 September 2015
Short description: | p1@LOC729291 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC729291_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -136bp_to_BC048978_5end |
EntrezGene: | LOC729291 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.30e-16 | 76 |
hematopoietic system | 2.10e-15 | 98 |
blood island | 2.10e-15 | 98 |
bone element | 7.12e-15 | 82 |
skeletal element | 2.12e-14 | 90 |
skeletal system | 1.52e-13 | 100 |
immune system | 4.04e-13 | 93 |
hemolymphoid system | 1.53e-12 | 108 |
musculoskeletal system | 3.65e-08 | 167 |
connective tissue | 1.18e-07 | 371 |