FFCP PHASE1:Hg19::chr21:30671235..30671253,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=571 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=935 | |||
|TSSclassifier=strong | |||
|UniProt=O14867,Q6ICU0 | |||
|association_with_transcript=15bp_to_NM_001186,uc002ynj.2_5end | |||
|cluster_id=chr21:30671235..30671253,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_BACH1_5end | |||
|id=chr21:30671235..30671253,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.66e-32!76;CL:0000557!4.00e-29!71;CL:0000763!1.23e-28!112;CL:0000049!1.23e-28!112;CL:0000839!2.55e-28!70;CL:0002057!1.17e-27!42;CL:0002009!3.25e-26!65;CL:0002194!4.42e-25!63;CL:0000576!4.42e-25!63;CL:0000040!4.42e-25!63;CL:0000559!4.42e-25!63;CL:0000738!9.59e-24!140;CL:0000860!1.38e-23!45;CL:0000037!1.01e-21!172;CL:0000566!1.01e-21!172;CL:0002032!1.82e-21!165;CL:0000837!1.82e-21!165;CL:0002031!2.65e-19!124;CL:0000988!3.33e-19!182;CL:0000134!1.39e-18!358;CL:0002320!3.18e-18!365;CL:0002087!1.11e-16!119;CL:0000034!1.31e-14!444;CL:0000723!1.48e-14!436;CL:0000048!3.31e-14!430;CL:0000219!1.60e-13!390;CL:0000081!7.39e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.18e-20;33!CL:0002057;1.18e-20;33!CL:0000473;2.60e-19;39!CL:0000234;2.60e-19;39!CL:0000576;1.80e-17;48!CL:0000766;3.68e-16;69!CL:0000763;4.47e-09;100!CL:0000081;6.71e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.72e-36,72;CL:0000557,2.62e-32,67;CL:0000839,1.80e-31,66;CL:0000763,7.69e-31,108;CL:0000049,7.69e-31,108;CL:0000473,5.94e-30,48;CL:0000234,5.94e-30,48;CL:0002009,2.29e-29,61;CL:0002194,3.32e-28,59;CL:0000576,3.32e-28,59;CL:0000040,3.32e-28,59;CL:0000559,3.32e-28,59;CL:0000860,1.17e-27,42;CL:0002057,1.17e-27,42;CL:0000738,2.20e-25,136;CL:0000037,4.66e-23,168;CL:0002032,7.87e-23,161;CL:0000837,7.87e-23,161;CL:0000988,4.77e-21,177;CL:0002031,7.59e-21,120;CL:0000134,4.63e-20,354;CL:0002320,1.12e-19,361;CL:0002087,4.09e-18,115;CL:0000034,7.44e-16,441;CL:0000723,8.37e-16,433;CL:0000048,1.93e-15,427;CL:0000219,1.00e-14,386;CL:0000081,7.39e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.21e-20;42!CL:0000049;2.43e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.17e-31!102;UBERON:0003061!5.17e-31!102;UBERON:0002193!7.87e-27!112;UBERON:0002371!1.29e-26!80;UBERON:0001474!1.21e-24!86;UBERON:0004765!2.00e-22!101;UBERON:0001434!2.00e-22!101;UBERON:0002384!1.72e-17!375;UBERON:0002405!3.81e-16!115;UBERON:0002204!5.95e-13!167;UBERON:0000178!6.20e-07!15;UBERON:0000179!6.20e-07!15;UBERON:0000463!6.20e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.30e-07;15!UBERON:0000179;6.30e-07;15!UBERON:0000463;6.30e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.57e-33,98;UBERON:0003061,1.57e-33,98;UBERON:0002371,2.51e-29,76;UBERON:0002193,6.24e-29,108;UBERON:0001474,4.63e-27,82;UBERON:0004765,9.58e-27,90;UBERON:0001434,2.92e-24,100;UBERON:0002405,5.16e-23,93;UBERON:0002384,6.76e-19,371;UBERON:0002204,5.56e-14,167;UBERON:0003081,6.17e-09,203;UBERON:0000178,6.20e-07,15;UBERON:0000179,6.20e-07,15;UBERON:0000463,6.20e-07,15 | |||
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| |||
|short_description=p1@BACH1 | |||
}} |
Latest revision as of 01:34, 18 September 2015
Short description: | p1@BACH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BACH1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 15bp_to_NM_001186, uc002ynj.2_5end |
EntrezGene: | BACH1 |
HGNC: | 935 |
UniProt: | O14867Q6ICU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.72e-36 | 72 |
granulocyte monocyte progenitor cell | 2.62e-32 | 67 |
myeloid lineage restricted progenitor cell | 1.80e-31 | 66 |
myeloid cell | 7.69e-31 | 108 |
common myeloid progenitor | 7.69e-31 | 108 |
defensive cell | 5.94e-30 | 48 |
phagocyte | 5.94e-30 | 48 |
macrophage dendritic cell progenitor | 2.29e-29 | 61 |
monopoietic cell | 3.32e-28 | 59 |
monocyte | 3.32e-28 | 59 |
monoblast | 3.32e-28 | 59 |
promonocyte | 3.32e-28 | 59 |
classical monocyte | 1.17e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-27 | 42 |
leukocyte | 2.20e-25 | 136 |
hematopoietic stem cell | 4.66e-23 | 168 |
hematopoietic oligopotent progenitor cell | 7.87e-23 | 161 |
hematopoietic multipotent progenitor cell | 7.87e-23 | 161 |
hematopoietic cell | 4.77e-21 | 177 |
hematopoietic lineage restricted progenitor cell | 7.59e-21 | 120 |
mesenchymal cell | 4.63e-20 | 354 |
connective tissue cell | 1.12e-19 | 361 |
nongranular leukocyte | 4.09e-18 | 115 |
stem cell | 7.44e-16 | 441 |
somatic stem cell | 8.37e-16 | 433 |
multi fate stem cell | 1.93e-15 | 427 |
motile cell | 1.00e-14 | 386 |
blood cell | 7.39e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.57e-33 | 98 |
blood island | 1.57e-33 | 98 |
bone marrow | 2.51e-29 | 76 |
hemolymphoid system | 6.24e-29 | 108 |
bone element | 4.63e-27 | 82 |
skeletal element | 9.58e-27 | 90 |
skeletal system | 2.92e-24 | 100 |
immune system | 5.16e-23 | 93 |
connective tissue | 6.76e-19 | 371 |
musculoskeletal system | 5.56e-14 | 167 |
lateral plate mesoderm | 6.17e-09 | 203 |
blood | 6.20e-07 | 15 |
haemolymphatic fluid | 6.20e-07 | 15 |
organism substance | 6.20e-07 | 15 |