FFCP PHASE1:Hg19::chr10:35484053..35484076,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1390 | |EntrezGene=1390 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2352 | |HGNC=2352 | ||
|TSSclassifier=strong | |||
|UniProt=Q03060,Q5W1B2,A8K3J7 | |UniProt=Q03060,Q5W1B2,A8K3J7 | ||
|association_with_transcript=0bp_to_ENST00000356917,ENST00000473940,ENST00000487763,ENST00000488328,NM_182717,NM_182718,NM_182719,NM_182720,uc001iyl.2,uc001iym.2,uc001iyn.2,uc001iyo.2_5end | |association_with_transcript=0bp_to_ENST00000356917,ENST00000473940,ENST00000487763,ENST00000488328,NM_182717,NM_182718,NM_182719,NM_182720,uc001iyl.2,uc001iym.2,uc001iyn.2,uc001iyo.2_5end | ||
|cluster_id=chr10:35484053..35484076,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_1_at_CREM_5end | |description=CAGE_peak_1_at_CREM_5end | ||
|id=chr10:35484053..35484076,+ | |id=chr10:35484053..35484076,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.25e-37!140;CL:0002031!2.08e-27!124;CL:0002087!1.62e-26!119;CL:0000766!2.52e-26!76;CL:0000037!9.39e-26!172;CL:0000566!9.39e-26!172;CL:0000988!6.59e-24!182;CL:0002032!1.38e-23!165;CL:0000837!1.38e-23!165;CL:0000860!9.72e-23!45;CL:0000557!1.66e-21!71;CL:0002057!2.71e-21!42;CL:0000839!2.94e-20!70;CL:0002009!6.43e-20!65;CL:0002194!5.16e-19!63;CL:0000576!5.16e-19!63;CL:0000040!5.16e-19!63;CL:0000559!5.16e-19!63;CL:0000763!3.80e-16!112;CL:0000049!3.80e-16!112;CL:0000542!2.57e-07!53;CL:0000051!2.57e-07!53;CL:0000838!2.71e-07!52 | |ontology_enrichment_celltype=CL:0000738!6.25e-37!140;CL:0002031!2.08e-27!124;CL:0002087!1.62e-26!119;CL:0000766!2.52e-26!76;CL:0000037!9.39e-26!172;CL:0000566!9.39e-26!172;CL:0000988!6.59e-24!182;CL:0002032!1.38e-23!165;CL:0000837!1.38e-23!165;CL:0000860!9.72e-23!45;CL:0000557!1.66e-21!71;CL:0002057!2.71e-21!42;CL:0000839!2.94e-20!70;CL:0002009!6.43e-20!65;CL:0002194!5.16e-19!63;CL:0000576!5.16e-19!63;CL:0000040!5.16e-19!63;CL:0000559!5.16e-19!63;CL:0000763!3.80e-16!112;CL:0000049!3.80e-16!112;CL:0000542!2.57e-07!53;CL:0000051!2.57e-07!53;CL:0000838!2.71e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.44e-20;33!CL:0002057;2.44e-20;33!CL:0000473;1.87e-17;39!CL:0000234;1.87e-17;39!CL:0000766;4.86e-12;69!CL:0000576;5.75e-12;48!CL:0002087;2.15e-08;104!CL:0000738;3.14e-08;136!CL:0000094;8.58e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.54e-38,136;CL:0002031,8.13e-28,120;CL:0002087,4.95e-27,115;CL:0000766,5.72e-27,72;CL:0000037,7.02e-27,168;CL:0000988,2.45e-25,177;CL:0002032,7.90e-25,161;CL:0000837,7.90e-25,161;CL:0000473,2.07e-23,48;CL:0000234,2.07e-23,48;CL:0000860,6.98e-23,42;CL:0002057,6.98e-23,42;CL:0000557,4.93e-22,67;CL:0000839,2.91e-20,66;CL:0002009,4.36e-20,61;CL:0002194,4.06e-19,59;CL:0000576,4.06e-19,59;CL:0000040,4.06e-19,59;CL:0000559,4.06e-19,59;CL:0000763,5.97e-17,108;CL:0000049,5.97e-17,108;CL:0000542,1.05e-07,53;CL:0000051,1.05e-07,53;CL:0000838,1.11e-07,52;CL:0000094,8.97e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.14e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.29e-21!102;UBERON:0003061!7.29e-21!102;UBERON:0002193!6.95e-19!112;UBERON:0002371!1.66e-18!80;UBERON:0001474!3.15e-18!86;UBERON:0004765!1.13e-14!101;UBERON:0001434!1.13e-14!101;UBERON:0002405!1.34e-12!115;UBERON:0007023!3.15e-09!115;UBERON:0003081!7.42e-09!216;UBERON:0002204!2.10e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!7.29e-21!102;UBERON:0003061!7.29e-21!102;UBERON:0002193!6.95e-19!112;UBERON:0002371!1.66e-18!80;UBERON:0001474!3.15e-18!86;UBERON:0004765!1.13e-14!101;UBERON:0001434!1.13e-14!101;UBERON:0002405!1.34e-12!115;UBERON:0007023!3.15e-09!115;UBERON:0003081!7.42e-09!216;UBERON:0002204!2.10e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.37e-21,98;UBERON:0003061,7.37e-21,98;UBERON:0002371,4.19e-19,76;UBERON:0002193,7.53e-19,108;UBERON:0001474,8.50e-19,82;UBERON:0002405,1.86e-18,93;UBERON:0004765,1.45e-15,90;UBERON:0001434,4.40e-13,100;UBERON:0003081,1.97e-09,203;UBERON:0007023,5.37e-09,114 | |||
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| ||
|short_description=p1@CREM | |short_description=p1@CREM | ||
}} | }} |
Latest revision as of 01:49, 18 September 2015
Short description: | p1@CREM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CREM_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000356917, ENST00000473940, ENST00000487763, ENST00000488328, NM_182717, NM_182718, NM_182719, NM_182720, uc001iyl.2, uc001iym.2, uc001iyn.2, uc001iyo.2_5end |
EntrezGene: | CREM |
HGNC: | 2352 |
UniProt: | Q03060Q5W1B2A8K3J7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.54e-38 | 136 |
hematopoietic lineage restricted progenitor cell | 8.13e-28 | 120 |
nongranular leukocyte | 4.95e-27 | 115 |
myeloid leukocyte | 5.72e-27 | 72 |
hematopoietic stem cell | 7.02e-27 | 168 |
hematopoietic cell | 2.45e-25 | 177 |
hematopoietic oligopotent progenitor cell | 7.90e-25 | 161 |
hematopoietic multipotent progenitor cell | 7.90e-25 | 161 |
defensive cell | 2.07e-23 | 48 |
phagocyte | 2.07e-23 | 48 |
classical monocyte | 6.98e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.98e-23 | 42 |
granulocyte monocyte progenitor cell | 4.93e-22 | 67 |
myeloid lineage restricted progenitor cell | 2.91e-20 | 66 |
macrophage dendritic cell progenitor | 4.36e-20 | 61 |
monopoietic cell | 4.06e-19 | 59 |
monocyte | 4.06e-19 | 59 |
monoblast | 4.06e-19 | 59 |
promonocyte | 4.06e-19 | 59 |
myeloid cell | 5.97e-17 | 108 |
common myeloid progenitor | 5.97e-17 | 108 |
lymphocyte | 1.05e-07 | 53 |
common lymphoid progenitor | 1.05e-07 | 53 |
lymphoid lineage restricted progenitor cell | 1.11e-07 | 52 |
granulocyte | 8.97e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.37e-21 | 98 |
blood island | 7.37e-21 | 98 |
bone marrow | 4.19e-19 | 76 |
hemolymphoid system | 7.53e-19 | 108 |
bone element | 8.50e-19 | 82 |
immune system | 1.86e-18 | 93 |
skeletal element | 1.45e-15 | 90 |
skeletal system | 4.40e-13 | 100 |
lateral plate mesoderm | 1.97e-09 | 203 |
adult organism | 5.37e-09 | 114 |