FFCP PHASE1:Hg19::chr17:7751337..7751346,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23135 | |EntrezGene=23135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |HGNC=29012 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=473bp_to_uc002gix.2_5end | |association_with_transcript=473bp_to_uc002gix.2_5end | ||
|cluster_id=chr17:7751337..7751346,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_21_at_KDM6B_5end | |description=CAGE_peak_21_at_KDM6B_5end | ||
|id=chr17:7751337..7751346,+ | |id=chr17:7751337..7751346,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.53e-19!42;CL:0000860!1.13e-17!45;CL:0000557!4.63e-12!71;CL:0002009!1.03e-11!65;CL:0002031!3.04e-11!124;CL:0000738!7.36e-11!140;CL:0000766!9.50e-11!76;CL:0000839!3.43e-10!70;CL:0002194!4.47e-10!63;CL:0000576!4.47e-10!63;CL:0000040!4.47e-10!63;CL:0000559!4.47e-10!63;CL:0002087!1.05e-09!119;CL:0002032!5.27e-08!165;CL:0000837!5.27e-08!165;CL:0000037!9.36e-08!172;CL:0000566!9.36e-08!172;CL:0000763!3.22e-07!112;CL:0000049!3.22e-07!112;CL:0000988!3.38e-07!182 | |ontology_enrichment_celltype=CL:0002057!1.53e-19!42;CL:0000860!1.13e-17!45;CL:0000557!4.63e-12!71;CL:0002009!1.03e-11!65;CL:0002031!3.04e-11!124;CL:0000738!7.36e-11!140;CL:0000766!9.50e-11!76;CL:0000839!3.43e-10!70;CL:0002194!4.47e-10!63;CL:0000576!4.47e-10!63;CL:0000040!4.47e-10!63;CL:0000559!4.47e-10!63;CL:0002087!1.05e-09!119;CL:0002032!5.27e-08!165;CL:0000837!5.27e-08!165;CL:0000037!9.36e-08!172;CL:0000566!9.36e-08!172;CL:0000763!3.22e-07!112;CL:0000049!3.22e-07!112;CL:0000988!3.38e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.29e-39;33!CL:0002057;9.29e-39;33!CL:0000473;4.66e-33;39!CL:0000234;4.66e-33;39!CL:0000576;5.77e-17;48!CL:0000766;2.01e-16;69!CL:0000763;1.42e-08;100!CL:0000738;4.58e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.45e-34,42;CL:0002057,1.45e-34,42;CL:0000473,4.27e-30,48;CL:0000234,4.27e-30,48;CL:0000766,2.35e-27,72;CL:0000839,2.06e-25,66;CL:0000557,5.12e-25,67;CL:0002194,7.87e-24,59;CL:0000576,7.87e-24,59;CL:0000040,7.87e-24,59;CL:0000559,7.87e-24,59;CL:0002009,5.07e-23,61;CL:0000763,8.12e-18,108;CL:0000049,8.12e-18,108;CL:0000738,3.44e-16,136;CL:0002031,7.49e-16,120;CL:0002087,5.55e-14,115;CL:0002032,1.99e-13,161;CL:0000837,1.99e-13,161;CL:0000037,8.45e-13,168;CL:0000988,4.60e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.20e-26;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.25e-10!80;UBERON:0002390!6.23e-09!102;UBERON:0003061!6.23e-09!102;UBERON:0001474!1.61e-08!86;UBERON:0002405!1.26e-07!115;UBERON:0002193!2.38e-07!112 | |ontology_enrichment_uberon=UBERON:0002371!9.25e-10!80;UBERON:0002390!6.23e-09!102;UBERON:0003061!6.23e-09!102;UBERON:0001474!1.61e-08!86;UBERON:0002405!1.26e-07!115;UBERON:0002193!2.38e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.26e-22,76;UBERON:0001474,3.05e-20,82;UBERON:0004765,2.46e-18,90;UBERON:0002405,1.05e-17,93;UBERON:0002390,9.78e-17,98;UBERON:0003061,9.78e-17,98;UBERON:0001434,2.24e-16,100;UBERON:0002193,4.59e-15,108;UBERON:0002204,5.77e-11,167;UBERON:0003081,2.58e-07,203 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,1.62700325833979,0,0.309706370895104,2.8769239232215,0.256160706529101,0.709446689665756,1.37898272294647,1.93645405075148,2.70852973188684,1.50593871634084,0.272906150057846,0,3.36692281607993,0.962787081228281,4.47535988059329,0,0,0,4.35313857942876,0.56738522469114,1.86846674698672,1.25624332628372,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0.590129310341499,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,1.06976078313403,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,12.3165809473986,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0,0.39669780522807,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0.111855431797792,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0.198950775161368,0.118920090777569,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.103432995861895,0,0,0.129177819672012,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,1.62700325833979,0,0.309706370895104,2.8769239232215,0.256160706529101,0.709446689665756,1.37898272294647,1.93645405075148,2.70852973188684,1.50593871634084,0.272906150057846,0,3.36692281607993,0.962787081228281,4.47535988059329,0,0,0,4.35313857942876,0.56738522469114,1.86846674698672,1.25624332628372,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0.590129310341499,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,1.06976078313403,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,12.3165809473986,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0,0.39669780522807,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0.111855431797792,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0.198950775161368,0.118920090777569,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.103432995861895,0,0,0.129177819672012,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p21@KDM6B | |short_description=p21@KDM6B | ||
}} | }} |
Latest revision as of 02:00, 18 September 2015
Short description: | p21@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_KDM6B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 473bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.45e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.45e-34 | 42 |
defensive cell | 4.27e-30 | 48 |
phagocyte | 4.27e-30 | 48 |
myeloid leukocyte | 2.35e-27 | 72 |
myeloid lineage restricted progenitor cell | 2.06e-25 | 66 |
granulocyte monocyte progenitor cell | 5.12e-25 | 67 |
monopoietic cell | 7.87e-24 | 59 |
monocyte | 7.87e-24 | 59 |
monoblast | 7.87e-24 | 59 |
promonocyte | 7.87e-24 | 59 |
macrophage dendritic cell progenitor | 5.07e-23 | 61 |
myeloid cell | 8.12e-18 | 108 |
common myeloid progenitor | 8.12e-18 | 108 |
leukocyte | 3.44e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 7.49e-16 | 120 |
nongranular leukocyte | 5.55e-14 | 115 |
hematopoietic oligopotent progenitor cell | 1.99e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-13 | 161 |
hematopoietic stem cell | 8.45e-13 | 168 |
hematopoietic cell | 4.60e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.26e-22 | 76 |
bone element | 3.05e-20 | 82 |
skeletal element | 2.46e-18 | 90 |
immune system | 1.05e-17 | 93 |
hematopoietic system | 9.78e-17 | 98 |
blood island | 9.78e-17 | 98 |
skeletal system | 2.24e-16 | 100 |
hemolymphoid system | 4.59e-15 | 108 |
musculoskeletal system | 5.77e-11 | 167 |
lateral plate mesoderm | 2.58e-07 | 203 |