FFCP PHASE1:Hg19::chr21:32716507..32716528,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:32716507..32716528,-
|short_description=p3@TIAM1
|description=CAGE_peak_3_at_TIAM1_5end
|association_with_transcript=65bp_to_ENST00000455508_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7074 | |EntrezGene=7074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11805 | |HGNC=11805 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMB5 | |UniProt=C9JMB5 | ||
|association_with_transcript=65bp_to_ENST00000455508_5end | |||
|cluster_id=chr21:32716507..32716528,- | |||
|description=CAGE_peak_3_at_TIAM1_5end | |||
|id=chr21:32716507..32716528,- | |||
|ontology_enrichment_celltype=CL:0000557!5.82e-29!71;CL:0002057!1.04e-26!42;CL:0000839!1.47e-26!70;CL:0002009!1.70e-26!65;CL:0000766!1.35e-25!76;CL:0002194!4.42e-25!63;CL:0000576!4.42e-25!63;CL:0000040!4.42e-25!63;CL:0000559!4.42e-25!63;CL:0000860!6.72e-23!45;CL:0000763!1.64e-20!112;CL:0000049!1.64e-20!112;CL:0000738!3.08e-15!140;CL:0002031!3.52e-13!124;CL:0000037!8.21e-12!172;CL:0000566!8.21e-12!172;CL:0002087!1.72e-11!119;CL:0002032!4.03e-11!165;CL:0000837!4.03e-11!165;CL:0000988!5.99e-11!182;CL:0002393!1.70e-07!9;CL:0002397!1.70e-07!9;CL:0000451!3.36e-07!10;CL:0000990!6.69e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.44e-27;39!CL:0000234;5.44e-27;39!CL:0000860;6.11e-27;33!CL:0002057;6.11e-27;33!CL:0000576;1.64e-23;48!CL:0000766;8.34e-21;69!CL:0000763;9.94e-12;100!CL:0000451;6.83e-09;10!CL:0000990;2.25e-08;8!CL:0000738;1.62e-07;136!CL:0002393;3.00e-07;6!CL:0002397;3.00e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.50e-49,67;CL:0000839,9.23e-46,66;CL:0000766,2.34e-45,72;CL:0002009,6.75e-45,61;CL:0000473,1.06e-43,48;CL:0000234,1.06e-43,48;CL:0002194,1.02e-42,59;CL:0000576,1.02e-42,59;CL:0000040,1.02e-42,59;CL:0000559,1.02e-42,59;CL:0000763,1.71e-40,108;CL:0000049,1.71e-40,108;CL:0000860,2.57e-38,42;CL:0002057,2.57e-38,42;CL:0000738,2.82e-27,136;CL:0000037,1.21e-24,168;CL:0000988,3.33e-24,177;CL:0002032,5.36e-23,161;CL:0000837,5.36e-23,161;CL:0002031,1.23e-22,120;CL:0002087,1.20e-19,115;CL:0002393,3.17e-10,9;CL:0002397,3.17e-10,9;CL:0000451,7.47e-09,10;CL:0000990,2.37e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-27;42!CL:0000049;1.69e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.27e-33!102;UBERON:0003061!4.27e-33!102;UBERON:0002193!8.76e-28!112;UBERON:0002371!2.71e-26!80;UBERON:0001474!8.81e-24!86;UBERON:0004765!1.12e-21!101;UBERON:0001434!1.12e-21!101;UBERON:0002405!1.03e-14!115;UBERON:0007023!8.67e-13!115;UBERON:0002204!3.94e-10!167;UBERON:0003081!8.38e-10!216;UBERON:0000178!5.72e-08!15;UBERON:0000179!5.72e-08!15;UBERON:0000463!5.72e-08!15;UBERON:0000062!2.94e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.05e-11;15!UBERON:0000179;4.05e-11;15!UBERON:0000463;4.05e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.97e-51,98;UBERON:0003061,3.97e-51,98;UBERON:0002193,1.11e-44,108;UBERON:0002371,4.31e-44,76;UBERON:0001474,4.88e-40,82;UBERON:0004765,3.20e-35,90;UBERON:0002405,1.32e-34,93;UBERON:0001434,5.39e-31,100;UBERON:0003081,1.55e-20,203;UBERON:0002204,7.23e-13,167;UBERON:0000178,6.49e-11,15;UBERON:0000179,6.49e-11,15;UBERON:0000463,6.49e-11,15;UBERON:0007023,7.55e-11,114;UBERON:0000926,3.21e-09,315;UBERON:0004120,3.21e-09,315;UBERON:0006603,3.21e-09,315 | |||
|phase1_expression=0.363356758541113,0,0.986680828671798,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,1.31064823278103,1.58260186937072,0,0,0.672325146451775,0,0,0,0,0.816002764977012,0,0.286235987131057,0.547497700291537,0.125542639594803,2.36881557818649,1.55991119954897,2.20390187678302,8.26064981382698,10.747223146722,13.3141866051825,0.919421224478927,0.30120591877825,0.739508020333575,0.0774672005803016,0,0,21.0518255242113,18.0490002723128,13.8886957258145,7.61312612415743,1.6194683300949,2.31818010870768,13.6674344452791,10.5805264232867,6.30718559088322,8.13501629169896,9.45686142450199,6.81354015969228,13.2338500468189,22.0298207615027,10.6417003449863,8.61864201841546,16.7826017731795,1.35426486594342,9.78860165621544,7.09555990150399,5.16864014223695,10.7129362329816,8.66508373105453,7.03270838378945,14.5134572082155,19.3479747892983,13.2129672665135,7.83564944297177,11.3477044938228,6.85104473895132,13.0649305933506,14.6015217157656,12.1625753034865,6.05399502633369,11.7848843516021,6.0127853613768,17.3229334775792,15.5201138974482,11.3215668574523,21.2301112866876,19.5229960693958,20.8943262706204,23.9410704742649,20.4884177515063,21.1890418366975,0,0,0,0.426730222566507,0,0,0.661044872784862,0.954053754535364,0,0.587237189370939,0,1.32171328579026,2.80254281490768,0,0.196709770113833,0.393010762749165,0.205601498999509,0.334372990781356,0,0,0,0.668462741311041,0,0.221533894583621,0,0.896639238079726,0.390178042679635,1.15106533222573,0.829050053357545,1.15921234294021,0,0,0,1.92625882585863,0,0,0.253019692019503,0.318565414324097,0,0,0.903450714466637,0.511946444617674,0,1.4206635122641,0.821127996921047,0.604820229674197,0.267440195783507,0.289648807765598,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.472674085820339,0.443458794925128,0.43917392846563,1.37528029272598,0.364295288292542,0.370784442784429,36.0247606956698,36.2189853582476,28.1870876299994,0.715471872916026,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,1.3082821564276,1.49091585508596,0.506522046658319,0.397227542439656,0.573673241497627,0.354668382198357,0.560677600142307,0,0.24666754841716,1.55605517699883,0.269421344139376,0.326923806226917,0.756787138224657,0.576175924479999,0.234321431833797,0.624320153660641,0.570471821544449,0.149448680551801,0,0.161872944368132,0.280901613404497,0,0.368502951935304,0,0,0,0,0,0.336672227908132,1.00094815897571,0.277064115484183,0,0,0.45071417671979,0.226864366320042,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0,0.558350568994769,0.337552664482532,0.292311015483596,0.252433774244115,0,0.80823028409406,0,0.10075209822764,0,0.966304265816484,1.36373060295417,0.860413786167011,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0.343135620597051,0.878002283269004,0,0.301586917234893,1.01847289674383,0,0,0,0,0.469634776943287,0,0,0,0.790204397959275,0,16.0041053956808,17.3163156203036,12.3363864699644,0.93733833986777,0.503946384596579,1.70130116690864,0.716468181622786,0.290633938513962,0,22.6625089432134,31.7854846787746,23.635405171648,22.6268326864629,20.0725469147944,0.253991577168676,0.381988425558278,0,0,0.514137463516618,0,0.285826432630578,0.672786506072164,0.43596006883328,0.7333828582095,0.646358578788889,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,8.51366464488333,9.04062764577828,4.21667878966063,0.239624855491583,0,0,0.579125226670317,0,0.179060963239896,0.784596007954691,1.57624608161542,0.215627574859517,1.41177339907723,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0.813795071099207,0,0,0,0,1.20378439891088,0,0,0.664225598535437,0.921845842708516,0,0,0,8.68425709716127,5.39285502046542,2.02782359826544,2.12189300012382,0,0.907170879989041,0.248107807818777,0.153461973288062,0.280660094433074,1.02511319404561,0,0.64341568457443,0,1.07946785661859,0.887808626565635,1.14978018419333,0.519254429183621,1.51073491997947,0,0.40101294060657,1.01289087829486,0.114814448164607,0,0,0,0.462092022626489,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0.656029291399411,0,1.44257416306811,0.0915694648183434,0.165018999841176,1.14853107599234,1.30012049207304,3.21367859688319,0.386682873168488,1.23238893691716,0.921022048356777,0.827019434907183,0.429680979473094,0.870100163485371,1.53407929348982,0.801288320820636,1.65284915360978,0.384380134730212,1.40373983744043,0.6069466851333,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0.949138274156178,0.571890581771475,0,0,1.90921948755562,0,0,0,0.353437207037059,0.606547444719948,0,0.842516912477962,0,0.243713489631284,0,0,0,2.26016233240486,0,0,0,0,0,0,0.6196469961995,0.281695602532241,0.286822704408103,0.294747123039363,0,0,0.844430541190656,0.987884678879706,0.379473173765715,0,0.288666338176536,0.670302275535787,0,1.600444613205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| |phase1_expression=0.363356758541113,0,0.986680828671798,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,1.31064823278103,1.58260186937072,0,0,0.672325146451775,0,0,0,0,0.816002764977012,0,0.286235987131057,0.547497700291537,0.125542639594803,2.36881557818649,1.55991119954897,2.20390187678302,8.26064981382698,10.747223146722,13.3141866051825,0.919421224478927,0.30120591877825,0.739508020333575,0.0774672005803016,0,0,21.0518255242113,18.0490002723128,13.8886957258145,7.61312612415743,1.6194683300949,2.31818010870768,13.6674344452791,10.5805264232867,6.30718559088322,8.13501629169896,9.45686142450199,6.81354015969228,13.2338500468189,22.0298207615027,10.6417003449863,8.61864201841546,16.7826017731795,1.35426486594342,9.78860165621544,7.09555990150399,5.16864014223695,10.7129362329816,8.66508373105453,7.03270838378945,14.5134572082155,19.3479747892983,13.2129672665135,7.83564944297177,11.3477044938228,6.85104473895132,13.0649305933506,14.6015217157656,12.1625753034865,6.05399502633369,11.7848843516021,6.0127853613768,17.3229334775792,15.5201138974482,11.3215668574523,21.2301112866876,19.5229960693958,20.8943262706204,23.9410704742649,20.4884177515063,21.1890418366975,0,0,0,0.426730222566507,0,0,0.661044872784862,0.954053754535364,0,0.587237189370939,0,1.32171328579026,2.80254281490768,0,0.196709770113833,0.393010762749165,0.205601498999509,0.334372990781356,0,0,0,0.668462741311041,0,0.221533894583621,0,0.896639238079726,0.390178042679635,1.15106533222573,0.829050053357545,1.15921234294021,0,0,0,1.92625882585863,0,0,0.253019692019503,0.318565414324097,0,0,0.903450714466637,0.511946444617674,0,1.4206635122641,0.821127996921047,0.604820229674197,0.267440195783507,0.289648807765598,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.472674085820339,0.443458794925128,0.43917392846563,1.37528029272598,0.364295288292542,0.370784442784429,36.0247606956698,36.2189853582476,28.1870876299994,0.715471872916026,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,1.3082821564276,1.49091585508596,0.506522046658319,0.397227542439656,0.573673241497627,0.354668382198357,0.560677600142307,0,0.24666754841716,1.55605517699883,0.269421344139376,0.326923806226917,0.756787138224657,0.576175924479999,0.234321431833797,0.624320153660641,0.570471821544449,0.149448680551801,0,0.161872944368132,0.280901613404497,0,0.368502951935304,0,0,0,0,0,0.336672227908132,1.00094815897571,0.277064115484183,0,0,0.45071417671979,0.226864366320042,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0,0.558350568994769,0.337552664482532,0.292311015483596,0.252433774244115,0,0.80823028409406,0,0.10075209822764,0,0.966304265816484,1.36373060295417,0.860413786167011,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0.343135620597051,0.878002283269004,0,0.301586917234893,1.01847289674383,0,0,0,0,0.469634776943287,0,0,0,0.790204397959275,0,16.0041053956808,17.3163156203036,12.3363864699644,0.93733833986777,0.503946384596579,1.70130116690864,0.716468181622786,0.290633938513962,0,22.6625089432134,31.7854846787746,23.635405171648,22.6268326864629,20.0725469147944,0.253991577168676,0.381988425558278,0,0,0.514137463516618,0,0.285826432630578,0.672786506072164,0.43596006883328,0.7333828582095,0.646358578788889,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,8.51366464488333,9.04062764577828,4.21667878966063,0.239624855491583,0,0,0.579125226670317,0,0.179060963239896,0.784596007954691,1.57624608161542,0.215627574859517,1.41177339907723,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0.813795071099207,0,0,0,0,1.20378439891088,0,0,0.664225598535437,0.921845842708516,0,0,0,8.68425709716127,5.39285502046542,2.02782359826544,2.12189300012382,0,0.907170879989041,0.248107807818777,0.153461973288062,0.280660094433074,1.02511319404561,0,0.64341568457443,0,1.07946785661859,0.887808626565635,1.14978018419333,0.519254429183621,1.51073491997947,0,0.40101294060657,1.01289087829486,0.114814448164607,0,0,0,0.462092022626489,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0.656029291399411,0,1.44257416306811,0.0915694648183434,0.165018999841176,1.14853107599234,1.30012049207304,3.21367859688319,0.386682873168488,1.23238893691716,0.921022048356777,0.827019434907183,0.429680979473094,0.870100163485371,1.53407929348982,0.801288320820636,1.65284915360978,0.384380134730212,1.40373983744043,0.6069466851333,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0.949138274156178,0.571890581771475,0,0,1.90921948755562,0,0,0,0.353437207037059,0.606547444719948,0,0.842516912477962,0,0.243713489631284,0,0,0,2.26016233240486,0,0,0,0,0,0,0.6196469961995,0.281695602532241,0.286822704408103,0.294747123039363,0,0,0.844430541190656,0.987884678879706,0.379473173765715,0,0.288666338176536,0.670302275535787,0,1.600444613205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| ||
|short_description=p3@TIAM1 | |||
}} | }} |
Latest revision as of 02:25, 18 September 2015
Short description: | p3@TIAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TIAM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 65bp_to_ENST00000455508_5end |
EntrezGene: | TIAM1 |
HGNC: | 11805 |
UniProt: | C9JMB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.50e-49 | 67 |
myeloid lineage restricted progenitor cell | 9.23e-46 | 66 |
myeloid leukocyte | 2.34e-45 | 72 |
macrophage dendritic cell progenitor | 6.75e-45 | 61 |
defensive cell | 1.06e-43 | 48 |
phagocyte | 1.06e-43 | 48 |
monopoietic cell | 1.02e-42 | 59 |
monocyte | 1.02e-42 | 59 |
monoblast | 1.02e-42 | 59 |
promonocyte | 1.02e-42 | 59 |
myeloid cell | 1.71e-40 | 108 |
common myeloid progenitor | 1.71e-40 | 108 |
classical monocyte | 2.57e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.57e-38 | 42 |
leukocyte | 2.82e-27 | 136 |
hematopoietic stem cell | 1.21e-24 | 168 |
hematopoietic cell | 3.33e-24 | 177 |
hematopoietic oligopotent progenitor cell | 5.36e-23 | 161 |
hematopoietic multipotent progenitor cell | 5.36e-23 | 161 |
hematopoietic lineage restricted progenitor cell | 1.23e-22 | 120 |
nongranular leukocyte | 1.20e-19 | 115 |
intermediate monocyte | 3.17e-10 | 9 |
CD14-positive, CD16-positive monocyte | 3.17e-10 | 9 |
dendritic cell | 7.47e-09 | 10 |
conventional dendritic cell | 2.37e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.97e-51 | 98 |
blood island | 3.97e-51 | 98 |
hemolymphoid system | 1.11e-44 | 108 |
bone marrow | 4.31e-44 | 76 |
bone element | 4.88e-40 | 82 |
skeletal element | 3.20e-35 | 90 |
immune system | 1.32e-34 | 93 |
skeletal system | 5.39e-31 | 100 |
lateral plate mesoderm | 1.55e-20 | 203 |
musculoskeletal system | 7.23e-13 | 167 |
blood | 6.49e-11 | 15 |
haemolymphatic fluid | 6.49e-11 | 15 |
organism substance | 6.49e-11 | 15 |
adult organism | 7.55e-11 | 114 |
mesoderm | 3.21e-09 | 315 |
mesoderm-derived structure | 3.21e-09 | 315 |
presumptive mesoderm | 3.21e-09 | 315 |