FFCP PHASE1:Hg19::chr6:32806506..32806579,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:32806506..32806579,- to FFCP PHASE1:Hg19::chr6:32806506..32806579,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6891 | |EntrezGene=6891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=44 | |HGNC=44 | ||
|TSSclassifier=strong | |||
|UniProt=Q03519,Q5HY71,Q9UP03 | |UniProt=Q03519,Q5HY71,Q9UP03 | ||
|association_with_transcript=0bp_to_ENST00000374897,NM_000544,NM_018833,uc003ocb.1,uc003ocd.2,uc011dqf.1_5end | |||
|cluster_id=chr6:32806506..32806579,- | |||
|coexpression_cluster_id=C1766 | |||
|description=CAGE_peak_1_at_TAP2_5end | |||
|id=chr6:32806506..32806579,- | |||
|ontology_enrichment_celltype=CL:0000738!1.70e-38!140;CL:0002087!4.50e-35!119;CL:0002031!1.10e-28!124;CL:0000988!8.35e-28!182;CL:0000037!2.21e-27!172;CL:0000566!2.21e-27!172;CL:0002032!7.71e-25!165;CL:0000837!7.71e-25!165;CL:0000838!1.83e-21!52;CL:0000542!2.57e-21!53;CL:0000051!2.57e-21!53;CL:0002009!1.15e-13!65;CL:0000766!4.99e-13!76;CL:0002194!6.75e-13!63;CL:0000576!6.75e-13!63;CL:0000040!6.75e-13!63;CL:0000559!6.75e-13!63;CL:0000084!3.88e-11!25;CL:0000827!3.88e-11!25;CL:0000134!4.36e-11!358;CL:0002057!6.22e-11!42;CL:0000557!6.42e-11!71;CL:0002320!9.06e-11!365;CL:0000791!1.29e-10!18;CL:0000789!1.29e-10!18;CL:0002420!1.29e-10!18;CL:0002419!1.29e-10!18;CL:0000790!1.29e-10!18;CL:0000860!1.45e-10!45;CL:0000945!8.40e-10!24;CL:0000826!8.40e-10!24;CL:0000839!7.35e-09!70;CL:0000048!2.76e-08!430;CL:0000763!6.64e-08!112;CL:0000049!6.64e-08!112;CL:0000723!1.01e-07!436;CL:0000236!2.26e-07!14;CL:0000625!2.27e-07!11;CL:0000219!2.89e-07!390;CL:0000034!7.67e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.05e-12;53!CL:0000084;3.98e-11;25!CL:0000791;1.23e-10;18!CL:0000789;1.23e-10;18!CL:0002419;1.23e-10;18!CL:0002087;5.81e-10;104!CL:0000945;8.25e-10;24!CL:0000738;4.24e-08;136!CL:0000576;1.48e-07;48!CL:0000625;2.13e-07;11!CL:0000236;4.69e-07;13!CL:0000473;6.39e-07;39!CL:0000234;6.39e-07;39!CL:0000860;6.87e-07;33!CL:0002057;6.87e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.58e-39,136;CL:0002087,5.48e-36,115;CL:0002031,2.22e-29,120;CL:0000988,7.22e-28,177;CL:0000037,8.40e-28,168;CL:0002032,3.06e-25,161;CL:0000837,3.06e-25,161;CL:0000838,1.83e-21,52;CL:0000542,2.57e-21,53;CL:0000051,2.57e-21,53;CL:0002009,2.48e-14,61;CL:0000766,1.50e-13,72;CL:0002194,1.53e-13,59;CL:0000576,1.53e-13,59;CL:0000040,1.53e-13,59;CL:0000559,1.53e-13,59;CL:0000473,9.16e-12,48;CL:0000234,9.16e-12,48;CL:0000557,2.23e-11,67;CL:0000084,3.88e-11,25;CL:0000827,3.88e-11,25;CL:0000860,6.22e-11,42;CL:0002057,6.22e-11,42;CL:0000134,8.23e-11,354;CL:0000791,1.29e-10,18;CL:0000789,1.29e-10,18;CL:0002420,1.29e-10,18;CL:0002419,1.29e-10,18;CL:0000790,1.29e-10,18;CL:0002320,1.70e-10,361;CL:0000945,8.40e-10,24;CL:0000826,8.40e-10,24;CL:0000839,3.20e-09,66;CL:0000048,3.72e-08,427;CL:0000763,4.45e-08,108;CL:0000049,4.45e-08,108;CL:0000723,1.36e-07,433;CL:0000236,2.26e-07,14;CL:0000625,2.27e-07,11;CL:0000219,4.90e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000051;1.05e-12;53!CL:0000790;1.23e-10;18!CL:0002057;4.53e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.28e-20!112;UBERON:0002390!1.25e-17!102;UBERON:0003061!1.25e-17!102;UBERON:0002405!1.66e-12!115;UBERON:0003081!3.05e-11!216;UBERON:0002384!2.93e-10!375;UBERON:0002371!6.04e-10!80;UBERON:0001474!3.25e-08!86;UBERON:0000178!1.14e-07!15;UBERON:0000179!1.14e-07!15;UBERON:0000463!1.14e-07!15;UBERON:0004765!8.92e-07!101;UBERON:0001434!8.92e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.28e-07;15!UBERON:0000179;1.28e-07;15!UBERON:0000463;1.28e-07;15!UBERON:0002193;2.38e-07;42!UBERON:0002390;3.04e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.85e-20,108;UBERON:0002390,3.79e-18,98;UBERON:0003061,3.79e-18,98;UBERON:0002405,1.08e-14,93;UBERON:0002371,2.67e-10,76;UBERON:0003081,2.96e-10,203;UBERON:0002384,5.47e-10,371;UBERON:0001474,1.80e-08,82;UBERON:0004765,7.66e-08,90;UBERON:0000178,1.14e-07,15;UBERON:0000179,1.14e-07,15;UBERON:0000463,1.14e-07,15 | |||
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| ||
|short_description=p1@TAP2 | |||
}} | }} |
Latest revision as of 04:06, 18 September 2015
Short description: | p1@TAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAP2_5end |
Coexpression cluster: | C1766_CD14_CD14CD16_Hair_CD8_CD19_xeroderma_CD4 |
Association with transcript: | 0bp_to_ENST00000374897, NM_000544, NM_018833, uc003ocb.1, uc003ocd.2, uc011dqf.1_5end |
EntrezGene: | TAP2 |
HGNC: | 44 |
UniProt: | Q03519Q5HY71Q9UP03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.85e-20 | 108 |
hematopoietic system | 3.79e-18 | 98 |
blood island | 3.79e-18 | 98 |
immune system | 1.08e-14 | 93 |
bone marrow | 2.67e-10 | 76 |
lateral plate mesoderm | 2.96e-10 | 203 |
connective tissue | 5.47e-10 | 371 |
bone element | 1.80e-08 | 82 |
skeletal element | 7.66e-08 | 90 |
blood | 1.14e-07 | 15 |
haemolymphatic fluid | 1.14e-07 | 15 |
organism substance | 1.14e-07 | 15 |