FFCP PHASE1:Hg19::chr15:56209278..56209284,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4734 | |EntrezGene=4734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7727 | |HGNC=7727 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000506154_5end | |association_with_transcript=21bp_to_ENST00000506154_5end | ||
|cluster_id=chr15:56209278..56209284,- | |||
|description=CAGE_peak_6_at_NEDD4_5end | |description=CAGE_peak_6_at_NEDD4_5end | ||
|id=chr15:56209278..56209284,- | |id=chr15:56209278..56209284,- | ||
|ontology_enrichment_celltype=CL:0002556;1.74e-14;6!CL:1001319;2.50e-10;1!CL:1000600;2.50e-10;1!CL:0002620;1.01e-09;23!CL:0002551;6.67e-07;6!CL:0000057;9.53e-07;73 | |ontology_enrichment_celltype=CL:0000055!1.30e-14!180;CL:0000057!1.07e-13!75;CL:0002620!1.79e-13!23 | ||
| | |ontology_enrichment_celltype_v019=CL:0002556;1.74e-14;6!CL:1001319;2.50e-10;1!CL:1000600;2.50e-10;1!CL:0002620;1.01e-09;23!CL:0002551;6.67e-07;6!CL:0000057;9.53e-07;73 | ||
|ontology_enrichment_disease=DOID:6193;1.03e-10;1!DOID:17;4.06e-08;5!DOID:450;4.06e-08;5!DOID:66;4.06e-08;5!DOID:423;4.06e-08;5!DOID:0080000;4.06e-08;5!DOID:11722;4.06e-08;5 | |ontology_enrichment_celltype_v019_2=CL:0002556,1.59e-14,6;CL:1001319,3.61e-10,1;CL:1000600,3.61e-10,1;CL:0002620,9.86e-10,23;CL:0000057,1.75e-08,76;CL:0002551,6.48e-07,6 | ||
|ontology_enrichment_uberon=UBERON:0001758;1.74e-14;6!UBERON:0003672;1.74e-14;6!UBERON:0003129;1.69e-12;7!UBERON:0000165;2.29e-11;28!UBERON:0004645;2.50e-10;1!UBERON:0001256;2.50e-10;1!UBERON:0001259;2.50e-10;1!UBERON:0011137;3.89e-08;11!UBERON:0010323;3.89e-08;11!UBERON:0007811;4.02e-07;52 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.03e-10;1!DOID:17;4.06e-08;5!DOID:450;4.06e-08;5!DOID:66;4.06e-08;5!DOID:423;4.06e-08;5!DOID:0080000;4.06e-08;5!DOID:11722;4.06e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,8.95e-11,1;DOID:17,3.78e-08,5;DOID:450,3.78e-08,5;DOID:66,3.78e-08,5;DOID:423,3.78e-08,5;DOID:0080000,3.78e-08,5;DOID:11722,3.78e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.72e-13!95;UBERON:0000475!1.01e-11!365;UBERON:0000165!3.55e-08!28;UBERON:0000930!3.55e-08!28;UBERON:0000153!9.66e-08!129;UBERON:0007811!9.66e-08!129;UBERON:0000033!1.83e-07!123;UBERON:0002199!2.90e-07!45;UBERON:0002416!2.90e-07!45;UBERON:0002097!4.41e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;1.74e-14;6!UBERON:0003672;1.74e-14;6!UBERON:0003129;1.69e-12;7!UBERON:0000165;2.29e-11;28!UBERON:0004645;2.50e-10;1!UBERON:0001256;2.50e-10;1!UBERON:0001259;2.50e-10;1!UBERON:0011137;3.89e-08;11!UBERON:0010323;3.89e-08;11!UBERON:0007811;4.02e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,1.59e-14,6;UBERON:0003672,1.59e-14,6;UBERON:0003102,2.43e-13,99;UBERON:0003129,1.57e-12,7;UBERON:0000165,6.03e-11,29;UBERON:0000930,6.03e-11,29;UBERON:0004645,3.61e-10,1;UBERON:0001256,3.61e-10,1;UBERON:0001259,3.61e-10,1;UBERON:0010323,3.71e-08,11 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0.326923806226917,0,0,0.234321431833797,0.624320153660641,0,0.149448680551801,0.587172493218824,1.13311061057692,1.82586048712923,2.04154171254893,0.859840221182376,0.723280468230358,0,0.494533858557114,0,0,2.18836948140286,0.375355559615893,3.87889761677856,1.31693286264251,0.612975591598039,0,0.113432183160021,0.538168907066586,0,0,1.50045548042201,1.23663035086127,0,0.18611685633159,0.843881661206331,0.487185025805993,2.01947019395292,0.828449087780694,0,0.710019185033229,0.403008392910561,0.67824236924195,0.193260853163297,0,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,1.07436577943937,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0.35142424497814,0,0,0,1.32845119707087,0,0.868836144680828,0,0,0,0,0,0,0,0.604780586659361,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0.355123450626254,0.9033987161519,0,0.348631135379878,0,0,0,0,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0.308097234229289,0,0,0.214840489736547,0,0.0852266274161009,0.267096106940212,0,0,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0.95460974377781,0,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0.709522128141196,0,0,0.75894634753143,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.556543525114529,0,0,0.19924798825107,0,0,4.60209071259697,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0.330991955875499,0,0,0,0.277349346026277,0,0.195984794828755,0.69647365264322,0.17472666824203,2.23581842213102,0.19351266257817,0.146178634172371,0,0,0.441280633457501,0.225980740780532,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0.288109595976299,1.86378803348149,0,0.135904206073614,0.418411385249333,0.305994652908965,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0.528001682597033,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0.513260513652988,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0.15543720058278,0.295710299979268,0.796483835818512,0,0.776314784381297,0,0,0,0,0,1.22061219961398,0.363697318405119,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0.521988583930423,0,0.231522474323834,0,0,0,0,0,0,0,0,0.345430341731199,0.607719912354764,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0,0,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0.992422356778588,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.135939465953663,0,1.77290761325952,0,0,0.785577949580009,0,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0,0,0.473328002922261,0.937347452350735,0,0,0,0,0,0,0,0.647428837187895,3.69586104682489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,1.0661699095049,0.23806443146374,0,0,0,0.0636471582781649,0,1.30630048738177,0,0,0.143444410785353,0.332660356546013,1.13964576055364,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0.326923806226917,0,0,0.234321431833797,0.624320153660641,0,0.149448680551801,0.587172493218824,1.13311061057692,1.82586048712923,2.04154171254893,0.859840221182376,0.723280468230358,0,0.494533858557114,0,0,2.18836948140286,0.375355559615893,3.87889761677856,1.31693286264251,0.612975591598039,0,0.113432183160021,0.538168907066586,0,0,1.50045548042201,1.23663035086127,0,0.18611685633159,0.843881661206331,0.487185025805993,2.01947019395292,0.828449087780694,0,0.710019185033229,0.403008392910561,0.67824236924195,0.193260853163297,0,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,1.07436577943937,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0.35142424497814,0,0,0,1.32845119707087,0,0.868836144680828,0,0,0,0,0,0,0,0.604780586659361,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0.355123450626254,0.9033987161519,0,0.348631135379878,0,0,0,0,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0.308097234229289,0,0,0.214840489736547,0,0.0852266274161009,0.267096106940212,0,0,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0.95460974377781,0,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0.709522128141196,0,0,0.75894634753143,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.556543525114529,0,0,0.19924798825107,0,0,4.60209071259697,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0.330991955875499,0,0,0,0.277349346026277,0,0.195984794828755,0.69647365264322,0.17472666824203,2.23581842213102,0.19351266257817,0.146178634172371,0,0,0.441280633457501,0.225980740780532,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0.288109595976299,1.86378803348149,0,0.135904206073614,0.418411385249333,0.305994652908965,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0.528001682597033,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0.513260513652988,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0.15543720058278,0.295710299979268,0.796483835818512,0,0.776314784381297,0,0,0,0,0,1.22061219961398,0.363697318405119,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0.521988583930423,0,0.231522474323834,0,0,0,0,0,0,0,0,0.345430341731199,0.607719912354764,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0,0,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0.992422356778588,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.135939465953663,0,1.77290761325952,0,0,0.785577949580009,0,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0,0,0.473328002922261,0.937347452350735,0,0,0,0,0,0,0,0.647428837187895,3.69586104682489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,1.0661699095049,0.23806443146374,0,0,0,0.0636471582781649,0,1.30630048738177,0,0,0.143444410785353,0.332660356546013,1.13964576055364,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p6@NEDD4 | |short_description=p6@NEDD4 | ||
}} | }} |
Latest revision as of 04:57, 18 September 2015
Short description: | p6@NEDD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NEDD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000506154_5end |
EntrezGene: | NEDD4 |
HGNC: | 7727 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 1.59e-14 | 6 |
bladder cell | 3.61e-10 | 1 |
lower urinary tract cell | 3.61e-10 | 1 |
skin fibroblast | 9.86e-10 | 23 |
fibroblast | 1.75e-08 | 76 |
fibroblast of dermis | 6.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
periodontium | 1.59e-14 | 6 |
dentition | 1.59e-14 | 6 |
surface structure | 2.43e-13 | 99 |
skull | 1.57e-12 | 7 |
mouth | 6.03e-11 | 29 |
stomodeum | 6.03e-11 | 29 |
urinary bladder urothelium | 3.61e-10 | 1 |
wall of urinary bladder | 3.61e-10 | 1 |
mucosa of urinary bladder | 3.61e-10 | 1 |
cranial skeletal system | 3.71e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 8.95e-11 | 1 |
musculoskeletal system disease | 3.78e-08 | 5 |
myotonic disease | 3.78e-08 | 5 |
muscle tissue disease | 3.78e-08 | 5 |
myopathy | 3.78e-08 | 5 |
muscular disease | 3.78e-08 | 5 |
myotonic dystrophy | 3.78e-08 | 5 |