FFCP PHASE1:Hg19::chr1:44398943..44398960,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9048 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=727 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T4W7 | |||
|association_with_transcript=-31bp_to_ENST00000372359,ENST00000414809,NM_001136215,NM_057090,NM_057091,uc001cks.2,uc001ckt.2,uc001ckv.2_5end | |||
|cluster_id=chr1:44398943..44398960,+ | |||
|description=CAGE_peak_7_at_ARTN_5end | |||
|id=chr1:44398943..44398960,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.86e-19!254;CL:0002076!2.54e-14!43;CL:0002368!5.44e-11!13;CL:0000223!1.43e-10!59;CL:0002321!1.95e-09!248;CL:0000220!1.36e-08!246;CL:0002322!3.79e-07!5;CL:0002202!5.46e-07!9;CL:0002632!5.46e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002327;9.42e-13;4!CL:0000575;3.33e-12;2!CL:0000317;8.52e-12;2!CL:1000448;8.52e-12;2!CL:0002308;8.52e-12;2!CL:0002140;8.52e-12;2!CL:0002076;9.02e-11;42!CL:0002368;2.33e-10;13!CL:0000307;2.03e-08;3!CL:0000039;1.06e-07;7!CL:0000586;1.06e-07;7!CL:1001319;3.82e-07;1!CL:1000600;3.82e-07;1!CL:0002251;9.52e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.07e-16,253;CL:0002076,1.20e-13,42;CL:0002327,8.24e-13,4;CL:0000575,2.53e-12,2;CL:0000317,6.52e-12,2;CL:1000448,6.52e-12,2;CL:0002308,6.52e-12,2;CL:0002140,6.52e-12,2;CL:0002368,1.97e-10,13;CL:0000223,2.60e-09,58;CL:0000076,1.58e-08,63;CL:0000068,2.04e-08,3;CL:0000069,2.04e-08,3;CL:0000307,2.04e-08,3;CL:0000377,2.04e-08,3;CL:0000039,7.93e-08,7;CL:0000586,7.93e-08,7;CL:1001319,4.18e-07,1;CL:1000600,4.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;2.03e-08;3!CL:0000223;4.61e-07;58 | |||
|ontology_enrichment_disease=DOID:0050687!1.64e-14!143;DOID:305!2.42e-14!106;DOID:162!6.86e-13!235;DOID:14566!1.17e-12!239;DOID:1749!2.74e-12!14;DOID:3095!9.87e-08!22;DOID:2994!9.87e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.33e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.96e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.23e-07!5;UBERON:0005153!7.92e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;9.42e-13;4!UBERON:0002419;8.52e-12;2!UBERON:0007771;8.52e-12;2!UBERON:0003297;8.52e-12;2!UBERON:0001821;8.52e-12;2!UBERON:0003487;8.52e-12;2!UBERON:0001820;8.52e-12;2!UBERON:0004645;3.82e-07;1!UBERON:0001256;3.82e-07;1!UBERON:0001259;3.82e-07;1!UBERON:0003729;4.68e-07;13!UBERON:0000344;7.68e-07;20!UBERON:0000473;8.70e-07;8!UBERON:0003343;9.63e-07;4!UBERON:0004785;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,8.24e-13,4;UBERON:0005333,8.24e-13,4;UBERON:0008425,8.24e-13,4;UBERON:0005311,8.24e-13,4;UBERON:0002419,6.52e-12,2;UBERON:0007771,6.52e-12,2;UBERON:0003297,6.52e-12,2;UBERON:0001821,6.52e-12,2;UBERON:0003487,6.52e-12,2;UBERON:0001820,6.52e-12,2;UBERON:0005089,6.52e-12,2;UBERON:0005088,6.52e-12,2;UBERON:0000076,5.61e-11,8;UBERON:0005085,4.41e-10,31;UBERON:0004645,4.18e-07,1;UBERON:0001256,4.18e-07,1;UBERON:0001259,4.18e-07,1;UBERON:0003729,5.38e-07,13;UBERON:0000473,6.74e-07,8;UBERON:0000344,8.75e-07,20;UBERON:0003343,9.27e-07,4;UBERON:0004785,9.27e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,1.10926203050036,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0,2.18577172975525,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,1.36373060295417,0,1.21973706129595,1.06023814657188,0.348581828608555,0.829288440122964,0.756962552626885,1.45990943630332,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.502644862058154,1.11106134190236,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.567100388969546,1.25381931783988,1.16253575405585,1.91691339582606,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.355123450626254,0,0,0,0,0.40101294060657,0.460404944679482,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0,0,0.254876273045038,0.831076008928724,1.11937377361089,0,0,0,0,0,0,0,0,1.14853107599234,1.95018073810956,0,0.096670718292122,0,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,0,0.661139661443912,1.72971060628596,1.91419068741876,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.384888450902048,1.34060455107157,2.17781969722645,0,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,0,0,0,0,0,0,0.211125408127993,0,0,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0,1.02314474045374,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.568967241427498,0,0.472775363535873,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.217294743844016,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.391969589657511,1.30588809870604,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0.195551382734803,0.240476460754601,0,0.19980960958213,0,0,0.171594997861965,0,0,0.471388069233591,0.271808412147228,0.104602846312333,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.643012593860077,0.550157746388935,1.24632101408756,0,0,0,0.335434687599266,0,0,0.422401346077626,0.35857467866569,1.15149118391667,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0.197611631897944,0,4.46838880439127,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0.260994291965212,0.453411851024545,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.559518030877778,0,0,0.107824811396682,0.786329709279482,0,0.33946505990805,0.425149840203366,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0.471878893390961,2.93485757634686,3.35024431835981,0,0.690359926060101,0,0,0.60511520611056,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0.527613733078862,0.255524855279191,0,0.672567444437648,0.606965604236632,0,0,0.345701962667338,0,0,0,0.354581522651905,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0,0.173858272302579,0.801711364730253,0,0,0,0,0.118332000730565,0,0,1.14553434272025,0.93061915699296,0.955538938977433,0.111855431797792,0,0,0,0,0,0,0,1.98950775161368,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0.380095503034311,1.52983244612973,6.94765253690457,1.65410819162721,0,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,2.03508171527436,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p7@ARTN | |||
}} |
Latest revision as of 05:21, 18 September 2015
Short description: | p7@ARTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARTN_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000372359, ENST00000414809, NM_001136215, NM_057090, NM_057091, uc001cks.2, uc001ckt.2, uc001ckv.2_5end |
EntrezGene: | ARTN |
HGNC: | 727 |
UniProt: | Q5T4W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.07e-16 | 253 |
endo-epithelial cell | 1.20e-13 | 42 |
mammary gland epithelial cell | 8.24e-13 | 4 |
corneal epithelial cell | 2.53e-12 | 2 |
sebum secreting cell | 6.52e-12 | 2 |
epithelial cell of sweat gland | 6.52e-12 | 2 |
epithelial cell of skin gland | 6.52e-12 | 2 |
acinar cell of sebaceous gland | 6.52e-12 | 2 |
respiratory epithelial cell | 1.97e-10 | 13 |
endodermal cell | 2.60e-09 | 58 |
squamous epithelial cell | 1.58e-08 | 63 |
duct epithelial cell | 2.04e-08 | 3 |
branched duct epithelial cell | 2.04e-08 | 3 |
tracheal epithelial cell | 2.04e-08 | 3 |
tracheoblast | 2.04e-08 | 3 |
germ line cell | 7.93e-08 | 7 |
germ cell | 7.93e-08 | 7 |
bladder cell | 4.18e-07 | 1 |
lower urinary tract cell | 4.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 8.24e-13 | 4 |
mammary bud | 8.24e-13 | 4 |
mammary ridge | 8.24e-13 | 4 |
mammary placode | 8.24e-13 | 4 |
skin gland | 6.52e-12 | 2 |
epidermis gland | 6.52e-12 | 2 |
gland of integumental system | 6.52e-12 | 2 |
sebaceous gland | 6.52e-12 | 2 |
skin sebaceous gland | 6.52e-12 | 2 |
sweat gland | 6.52e-12 | 2 |
sweat gland placode | 6.52e-12 | 2 |
sebaceous gland placode | 6.52e-12 | 2 |
external ectoderm | 5.61e-11 | 8 |
ectodermal placode | 4.41e-10 | 31 |
urinary bladder urothelium | 4.18e-07 | 1 |
wall of urinary bladder | 4.18e-07 | 1 |
mucosa of urinary bladder | 4.18e-07 | 1 |
mouth mucosa | 5.38e-07 | 13 |
testis | 6.74e-07 | 8 |
mucosa | 8.75e-07 | 20 |
mucosa of oral region | 9.27e-07 | 4 |
respiratory system mucosa | 9.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.96e-14 | 14 |