FFCP PHASE1:Hg19::chr2:73144668..73144679,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2016 | |EntrezGene=2016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3340 | |HGNC=3340 | ||
|TSSclassifier=strong | |||
|UniProt=Q04741 | |UniProt=Q04741 | ||
|association_with_transcript=64bp_to_ENST00000258106,NM_004097,uc002sin.1_5end | |association_with_transcript=64bp_to_ENST00000258106,NM_004097,uc002sin.1_5end | ||
|cluster_id=chr2:73144668..73144679,+ | |||
|coexpression_cluster_id=C2705 | |coexpression_cluster_id=C2705 | ||
|description=CAGE_peak_5_at_EMX1_5end | |description=CAGE_peak_5_at_EMX1_5end | ||
|id=chr2:73144668..73144679,+ | |id=chr2:73144668..73144679,+ | ||
|ontology_enrichment_celltype=CL:0002605!1.25e-09!3;CL:0000242!2.50e-07!2;CL:0000128!5.61e-07!7;CL:0000126!5.61e-07!7;CL:0000127!5.61e-07!7;CL:0002453!5.61e-07!7 | |ontology_enrichment_celltype=CL:0002605!1.25e-09!3;CL:0000242!2.50e-07!2;CL:0000128!5.61e-07!7;CL:0000126!5.61e-07!7;CL:0000127!5.61e-07!7;CL:0002453!5.61e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.07e-13;2!CL:0000239;1.41e-09;3!CL:1000615;1.41e-09;3!CL:0002306;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.34e-13,8;CL:0000239,1.19e-09,3;CL:1000615,1.19e-09,3;CL:0002306,1.19e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.69e-11;10!UBERON:0007687;5.69e-11;10 | |||
|ontology_enrichment_disease=DOID:3493!7.79e-07!2 | |ontology_enrichment_disease=DOID:3493!7.79e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002902;5.92e-26;1!UBERON:0009899;5.92e-26;1!UBERON:0002021;9.92e-21;5!UBERON:0002113;5.07e-10;24!UBERON:0011143;5.07e-10;24!UBERON:0006853;1.41e-09;3!UBERON:0007685;1.41e-09;3!UBERON:0004134;1.41e-09;3!UBERON:0002114;1.41e-09;2!UBERON:0000489;2.10e-08;29!UBERON:0006554;3.82e-08;30!UBERON:0001008;3.82e-08;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,1.26e-25,1;UBERON:0009899,1.26e-25,1;UBERON:0002021,1.34e-20,5;UBERON:0002114,1.10e-09,2;UBERON:0006853,1.19e-09,3;UBERON:0007685,1.19e-09,3;UBERON:0004134,1.19e-09,3;UBERON:0002113,2.67e-09,26;UBERON:0003918,2.67e-09,26;UBERON:0011143,2.67e-09,26;UBERON:0005095,2.67e-09,26;UBERON:0007687,2.67e-09,26;UBERON:0000489,6.69e-08,31 | |||
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| ||
|short_description=p5@EMX1 | |short_description=p5@EMX1 | ||
}} | }} |
Latest revision as of 08:50, 18 September 2015
Short description: | p5@EMX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EMX1_5end |
Coexpression cluster: | C2705_kidney_brain_occipital_duodenum_Neurons_Renal_temporal |
Association with transcript: | 64bp_to_ENST00000258106, NM_004097, uc002sin.1_5end |
EntrezGene: | EMX1 |
HGNC: | 3340 |
UniProt: | Q04741 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.34e-13 | 8 |
brush border epithelial cell | 1.19e-09 | 3 |
kidney cortex tubule cell | 1.19e-09 | 3 |
epithelial cell of proximal tubule | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital pole | 1.26e-25 | 1 |
pole of cerebral hemisphere | 1.26e-25 | 1 |
occipital lobe | 1.34e-20 | 5 |
duodenum | 1.10e-09 | 2 |
renal cortex tubule | 1.19e-09 | 3 |
region of nephron tubule | 1.19e-09 | 3 |
proximal tubule | 1.19e-09 | 3 |
kidney | 2.67e-09 | 26 |
kidney mesenchyme | 2.67e-09 | 26 |
upper urinary tract | 2.67e-09 | 26 |
kidney rudiment | 2.67e-09 | 26 |
kidney field | 2.67e-09 | 26 |
cavitated compound organ | 6.69e-08 | 31 |