FFCP PHASE1:Hg19::chr3:46250120..46250167,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1230 | |EntrezGene=1230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1602 | |HGNC=1602 | ||
|TSSclassifier=strong | |||
|UniProt=P32246 | |UniProt=P32246 | ||
|association_with_transcript=-233bp_to_ENST00000296140_5end | |||
|cluster_id=chr3:46250120..46250167,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_5_at_CCR1_5end | |||
|id=chr3:46250120..46250167,- | |||
|ontology_enrichment_celltype=CL:0002194!9.03e-75!63;CL:0000576!9.03e-75!63;CL:0000040!9.03e-75!63;CL:0000559!9.03e-75!63;CL:0002009!5.00e-72!65;CL:0000839!7.56e-66!70;CL:0000766!4.83e-65!76;CL:0000557!1.03e-64!71;CL:0002057!2.48e-56!42;CL:0000860!8.23e-52!45;CL:0000763!2.37e-50!112;CL:0000049!2.37e-50!112;CL:0002087!4.15e-44!119;CL:0000738!2.71e-38!140;CL:0002031!7.41e-37!124;CL:0000037!6.49e-36!172;CL:0000566!6.49e-36!172;CL:0002032!4.36e-34!165;CL:0000837!4.36e-34!165;CL:0000988!5.90e-33!182;CL:0000134!1.46e-09!358;CL:0002320!4.51e-09!365;CL:0000235!5.74e-08!10;CL:0000219!8.12e-08!390;CL:0002619!6.84e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000473;9.51e-84;39!CL:0000234;9.51e-84;39!CL:0000860;9.18e-75;33!CL:0002057;9.18e-75;33!CL:0000576;4.31e-37;48!CL:0000235;1.42e-28;6!CL:0000766;7.80e-26;69!CL:0000763;2.91e-15;100!CL:0000738;1.82e-11;136!CL:0002087;9.67e-09;104!CL:0000840;1.23e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.52e-88,48;CL:0000234,1.52e-88,48;CL:0002194,1.55e-84,59;CL:0000576,1.55e-84,59;CL:0000040,1.55e-84,59;CL:0000559,1.55e-84,59;CL:0002009,1.41e-81,61;CL:0000839,5.89e-75,66;CL:0000557,9.50e-74,67;CL:0000766,1.24e-72,72;CL:0000860,6.52e-65,42;CL:0002057,6.52e-65,42;CL:0000763,3.14e-46,108;CL:0000049,3.14e-46,108;CL:0002087,3.03e-40,115;CL:0002031,2.78e-38,120;CL:0000738,2.83e-35,136;CL:0002032,1.09e-28,161;CL:0000837,1.09e-28,161;CL:0000235,2.19e-28,6;CL:0000037,3.43e-27,168;CL:0000988,1.93e-25,177;CL:0000134,4.93e-09,354;CL:0002320,1.03e-08,361;CL:0000840,1.19e-07,5;CL:0001029,1.19e-07,5;CL:0000219,1.36e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;7.09e-48;42!CL:0000049;2.98e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.38e-76!102;UBERON:0003061!1.38e-76!102;UBERON:0002193!1.71e-70!112;UBERON:0002371!9.45e-61!80;UBERON:0001474!1.87e-55!86;UBERON:0004765!5.87e-45!101;UBERON:0001434!5.87e-45!101;UBERON:0002405!1.24e-42!115;UBERON:0003081!8.22e-30!216;UBERON:0002204!2.80e-22!167;UBERON:0000178!1.20e-17!15;UBERON:0000179!1.20e-17!15;UBERON:0000463!1.20e-17!15;UBERON:0002384!5.83e-09!375;UBERON:0000926!5.69e-08!448;UBERON:0004120!5.69e-08!448;UBERON:0006603!5.69e-08!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.48e-14;15!UBERON:0000179;3.48e-14;15!UBERON:0000463;3.48e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.23e-72,98;UBERON:0003061,1.23e-72,98;UBERON:0002193,2.86e-65,108;UBERON:0002371,2.73e-64,76;UBERON:0001474,4.02e-59,82;UBERON:0004765,2.73e-53,90;UBERON:0002405,2.33e-51,93;UBERON:0001434,2.68e-47,100;UBERON:0003081,2.92e-31,203;UBERON:0002204,1.56e-25,167;UBERON:0000926,2.30e-17,315;UBERON:0004120,2.30e-17,315;UBERON:0006603,2.30e-17,315;UBERON:0000178,4.34e-14,15;UBERON:0000179,4.34e-14,15;UBERON:0000463,4.34e-14,15;UBERON:0002384,4.77e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.601633342410425,0.868043482863407,0.895661896959697,0.647787332037959,0.515151135268373,1.89017710413434,0.755751887377619,1.69808842831471,4.88100977501938,0.822335776043652,3.71647645074124,16.6861587546847,7.17249978281482,11.5876292645407,3.44745680736619,1.93645405075148,0,2.07066573496865,1.91034305040492,1.34834090667051,1.83650335422542,1.28371610830437,1.91801137739712,6.26717470354761,4.18873681005427,3.83602275479425,1.7412554317715,1.13477044938228,0.622822248995575,16.8336605722018,2.60741459210101,9.77349801173025,0.605399502633369,1.10483290796269,1.26584954976354,0.211255286311942,0.212604299965044,0,0.336985893439485,0.300353785683013,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.62273696827342,2.43781632218974,3.45690697349049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93947209739836,3.51006397708857,3.12125440806329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.00902836572851,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.02979043692868,1.52927441428475,0.569647187174163,0.238231775457789,2.87953591160336,1.29694662238543,1.08006287447623,1.58625035258854,0.213648142254946,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0.456469358066384,0.156679895773023,0,0,0,0,0.425846237690326,0.687010689511529,0.307240764308458,0.223676107892416,0.500547425135725,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.573358332605805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.601633342410425,0.868043482863407,0.895661896959697,0.647787332037959,0.515151135268373,1.89017710413434,0.755751887377619,1.69808842831471,4.88100977501938,0.822335776043652,3.71647645074124,16.6861587546847,7.17249978281482,11.5876292645407,3.44745680736619,1.93645405075148,0,2.07066573496865,1.91034305040492,1.34834090667051,1.83650335422542,1.28371610830437,1.91801137739712,6.26717470354761,4.18873681005427,3.83602275479425,1.7412554317715,1.13477044938228,0.622822248995575,16.8336605722018,2.60741459210101,9.77349801173025,0.605399502633369,1.10483290796269,1.26584954976354,0.211255286311942,0.212604299965044,0,0.336985893439485,0.300353785683013,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.62273696827342,2.43781632218974,3.45690697349049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93947209739836,3.51006397708857,3.12125440806329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.00902836572851,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.02979043692868,1.52927441428475,0.569647187174163,0.238231775457789,2.87953591160336,1.29694662238543,1.08006287447623,1.58625035258854,0.213648142254946,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0.456469358066384,0.156679895773023,0,0,0,0,0.425846237690326,0.687010689511529,0.307240764308458,0.223676107892416,0.500547425135725,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.573358332605805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p5@CCR1 | |||
}} | }} |
Latest revision as of 10:27, 18 September 2015
Short description: | p5@CCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCR1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -233bp_to_ENST00000296140_5end |
EntrezGene: | CCR1 |
HGNC: | 1602 |
UniProt: | P32246 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.52e-88 | 48 |
phagocyte | 1.52e-88 | 48 |
monopoietic cell | 1.55e-84 | 59 |
monocyte | 1.55e-84 | 59 |
monoblast | 1.55e-84 | 59 |
promonocyte | 1.55e-84 | 59 |
macrophage dendritic cell progenitor | 1.41e-81 | 61 |
myeloid lineage restricted progenitor cell | 5.89e-75 | 66 |
granulocyte monocyte progenitor cell | 9.50e-74 | 67 |
myeloid leukocyte | 1.24e-72 | 72 |
classical monocyte | 6.52e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.52e-65 | 42 |
myeloid cell | 3.14e-46 | 108 |
common myeloid progenitor | 3.14e-46 | 108 |
nongranular leukocyte | 3.03e-40 | 115 |
hematopoietic lineage restricted progenitor cell | 2.78e-38 | 120 |
leukocyte | 2.83e-35 | 136 |
hematopoietic oligopotent progenitor cell | 1.09e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-28 | 161 |
macrophage | 2.19e-28 | 6 |
hematopoietic stem cell | 3.43e-27 | 168 |
hematopoietic cell | 1.93e-25 | 177 |
mesenchymal cell | 4.93e-09 | 354 |
connective tissue cell | 1.03e-08 | 361 |
immature conventional dendritic cell | 1.19e-07 | 5 |
common dendritic progenitor | 1.19e-07 | 5 |
motile cell | 1.36e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.23e-72 | 98 |
blood island | 1.23e-72 | 98 |
hemolymphoid system | 2.86e-65 | 108 |
bone marrow | 2.73e-64 | 76 |
bone element | 4.02e-59 | 82 |
skeletal element | 2.73e-53 | 90 |
immune system | 2.33e-51 | 93 |
skeletal system | 2.68e-47 | 100 |
lateral plate mesoderm | 2.92e-31 | 203 |
musculoskeletal system | 1.56e-25 | 167 |
mesoderm | 2.30e-17 | 315 |
mesoderm-derived structure | 2.30e-17 | 315 |
presumptive mesoderm | 2.30e-17 | 315 |
blood | 4.34e-14 | 15 |
haemolymphatic fluid | 4.34e-14 | 15 |
organism substance | 4.34e-14 | 15 |
connective tissue | 4.77e-09 | 371 |