FFCP PHASE1:Hg19::chr11:57435441..57435628,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25921 | |EntrezGene=25921 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18472 | |HGNC=18472 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMA5,Q9C0B5 | |UniProt=E9PMA5,Q9C0B5 | ||
|association_with_transcript=0bp_to_ENST00000528177,NM_015457,uc001nkx.1,uc001nky.1_5end | |association_with_transcript=0bp_to_ENST00000528177,NM_015457,uc001nkx.1,uc001nky.1_5end | ||
|cluster_id=chr11:57435441..57435628,+ | |||
|description=CAGE_peak_1_at_ZDHHC5_5end | |description=CAGE_peak_1_at_ZDHHC5_5end | ||
|id=chr11:57435441..57435628,+ | |id=chr11:57435441..57435628,+ | ||
|ontology_enrichment_celltype=CL:0000012!4.72e-27!682;CL:0000548!8.98e-27!679;CL:0000004!8.98e-27!679;CL:0000255!8.98e-27!679;CL:0000144!1.49e-24!625;CL:0000063!1.86e-23!578;CL:0002371!1.52e-22!591;CL:0000003!4.90e-19!722;CL:0000557!2.52e-09!71;CL:0000839!4.61e-09!70;CL:0002009!5.72e-09!65;CL:0002194!2.34e-08!63;CL:0000576!2.34e-08!63;CL:0000040!2.34e-08!63;CL:0000559!2.34e-08!63;CL:0000066!1.07e-07!254;CL:0002057!2.27e-07!42;CL:0000766!3.97e-07!76 | |ontology_enrichment_celltype=CL:0000012!4.72e-27!682;CL:0000548!8.98e-27!679;CL:0000004!8.98e-27!679;CL:0000255!8.98e-27!679;CL:0000144!1.49e-24!625;CL:0000063!1.86e-23!578;CL:0002371!1.52e-22!591;CL:0000003!4.90e-19!722;CL:0000557!2.52e-09!71;CL:0000839!4.61e-09!70;CL:0002009!5.72e-09!65;CL:0002194!2.34e-08!63;CL:0000576!2.34e-08!63;CL:0000040!2.34e-08!63;CL:0000559!2.34e-08!63;CL:0000066!1.07e-07!254;CL:0002057!2.27e-07!42;CL:0000766!3.97e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-09;33!CL:0002057;1.49e-09;33!CL:0000473;6.78e-09;39!CL:0000234;6.78e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.98e-10,67;CL:0000839,3.74e-10,66;CL:0002009,4.11e-10,61;CL:0002194,1.83e-09,59;CL:0000576,1.83e-09,59;CL:0000040,1.83e-09,59;CL:0000559,1.83e-09,59;CL:0000473,1.88e-08,48;CL:0000234,1.88e-08,48;CL:0000766,5.65e-08,72;CL:0000066,9.72e-08,253;CL:0000860,2.27e-07,42;CL:0002057,2.27e-07,42;CL:0000763,4.71e-07,108;CL:0000049,4.71e-07,108;CL:0002320,8.33e-07,361;CL:0000134,8.44e-07,354;CL:0000723,8.70e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.26e-12!216;UBERON:0002371!1.42e-09!80;UBERON:0002405!1.59e-08!115;UBERON:0002193!8.23e-08!112;UBERON:0001474!1.16e-07!86;UBERON:0000926!1.55e-07!448;UBERON:0004120!1.55e-07!448;UBERON:0006603!1.55e-07!448;UBERON:0002390!5.08e-07!102;UBERON:0003061!5.08e-07!102 | |ontology_enrichment_uberon=UBERON:0003081!3.26e-12!216;UBERON:0002371!1.42e-09!80;UBERON:0002405!1.59e-08!115;UBERON:0002193!8.23e-08!112;UBERON:0001474!1.16e-07!86;UBERON:0000926!1.55e-07!448;UBERON:0004120!1.55e-07!448;UBERON:0006603!1.55e-07!448;UBERON:0002390!5.08e-07!102;UBERON:0003061!5.08e-07!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.81e-11,203;UBERON:0002405,4.36e-11,93;UBERON:0002371,1.32e-10,76;UBERON:0000926,4.01e-09,315;UBERON:0004120,4.01e-09,315;UBERON:0006603,4.01e-09,315;UBERON:0002193,1.66e-08,108;UBERON:0001474,1.74e-08,82;UBERON:0004765,2.76e-08,90;UBERON:0002390,1.06e-07,98;UBERON:0003061,1.06e-07,98 | |||
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| ||
|short_description=p1@ZDHHC5 | |short_description=p1@ZDHHC5 | ||
}} | }} |
Latest revision as of 10:42, 18 September 2015
Short description: | p1@ZDHHC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZDHHC5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528177, NM_015457, uc001nkx.1, uc001nky.1_5end |
EntrezGene: | ZDHHC5 |
HGNC: | 18472 |
UniProt: | E9PMA5Q9C0B5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.98e-10 | 67 |
myeloid lineage restricted progenitor cell | 3.74e-10 | 66 |
macrophage dendritic cell progenitor | 4.11e-10 | 61 |
monopoietic cell | 1.83e-09 | 59 |
monocyte | 1.83e-09 | 59 |
monoblast | 1.83e-09 | 59 |
promonocyte | 1.83e-09 | 59 |
defensive cell | 1.88e-08 | 48 |
phagocyte | 1.88e-08 | 48 |
myeloid leukocyte | 5.65e-08 | 72 |
epithelial cell | 9.72e-08 | 253 |
classical monocyte | 2.27e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.27e-07 | 42 |
myeloid cell | 4.71e-07 | 108 |
common myeloid progenitor | 4.71e-07 | 108 |
connective tissue cell | 8.33e-07 | 361 |
mesenchymal cell | 8.44e-07 | 354 |
somatic stem cell | 8.70e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.81e-11 | 203 |
immune system | 4.36e-11 | 93 |
bone marrow | 1.32e-10 | 76 |
mesoderm | 4.01e-09 | 315 |
mesoderm-derived structure | 4.01e-09 | 315 |
presumptive mesoderm | 4.01e-09 | 315 |
hemolymphoid system | 1.66e-08 | 108 |
bone element | 1.74e-08 | 82 |
skeletal element | 2.76e-08 | 90 |
hematopoietic system | 1.06e-07 | 98 |
blood island | 1.06e-07 | 98 |