FFCP PHASE1:Hg19::chr8:52811714..52811731,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115294 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30483 | |||
|TSSclassifier=strong | |||
|UniProt=F5H1M8,Q96MG8 | |||
|association_with_transcript=3bp_to_ENST00000544451,NM_052937,uc003xqw.3,uc003xqx.3,uc010lya.2,uc011ldn.1_5end | |||
|cluster_id=chr8:52811714..52811731,- | |||
|coexpression_cluster_id=C468 | |||
|description=CAGE_peak_3_at_PCMTD1_5end | |||
|id=chr8:52811714..52811731,- | |||
|ontology_enrichment_celltype=CL:0000037!8.63e-17!172;CL:0000566!8.63e-17!172;CL:0000738!3.44e-16!140;CL:0002032!8.06e-15!165;CL:0000837!8.06e-15!165;CL:0000988!1.18e-13!182;CL:0002031!3.48e-12!124;CL:0002087!4.26e-11!119;CL:0000763!8.20e-10!112;CL:0000049!8.20e-10!112;CL:0000766!6.24e-09!76;CL:0000557!4.78e-07!71;CL:0000839!5.61e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.61e-07;18!CL:0000789;3.61e-07;18!CL:0002419;3.61e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.27e-19,136;CL:0000037,5.60e-19,168;CL:0002032,1.15e-16,161;CL:0000837,1.15e-16,161;CL:0000988,2.95e-16,177;CL:0002031,2.51e-14,120;CL:0002087,5.25e-13,115;CL:0000763,3.60e-11,108;CL:0000049,3.60e-11,108;CL:0000766,5.81e-11,72;CL:0000557,1.26e-08,67;CL:0000839,1.51e-08,66;CL:0002009,1.70e-07,61;CL:0000791,3.48e-07,18;CL:0000789,3.48e-07,18;CL:0002420,3.48e-07,18;CL:0002419,3.48e-07,18;CL:0000790,3.48e-07,18;CL:0002194,4.01e-07,59;CL:0000576,4.01e-07,59;CL:0000040,4.01e-07,59;CL:0000559,4.01e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000790;3.61e-07;18!UBERON:0006601;7.02e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.97e-42!115;UBERON:0001049!1.68e-21!57;UBERON:0005068!1.68e-21!57;UBERON:0006241!1.68e-21!57;UBERON:0007135!1.68e-21!57;UBERON:0001017!4.50e-18!82;UBERON:0003080!4.76e-18!42;UBERON:0002780!1.07e-17!41;UBERON:0001890!1.07e-17!41;UBERON:0006240!1.07e-17!41;UBERON:0005743!1.42e-17!86;UBERON:0002616!4.36e-17!59;UBERON:0000955!9.03e-17!69;UBERON:0006238!9.03e-17!69;UBERON:0000073!1.46e-16!94;UBERON:0001016!1.46e-16!94;UBERON:0001893!2.03e-15!34;UBERON:0002020!3.31e-15!34;UBERON:0003528!3.31e-15!34;UBERON:0001869!5.76e-15!32;UBERON:0002791!7.41e-15!33;UBERON:0002619!1.15e-13!22;UBERON:0002346!1.58e-13!90;UBERON:0001950!1.58e-12!20;UBERON:0003075!1.87e-12!86;UBERON:0007284!1.87e-12!86;UBERON:0000956!6.21e-11!25;UBERON:0000203!6.21e-11!25;UBERON:0003056!3.84e-09!61;UBERON:0002390!4.90e-09!102;UBERON:0003061!4.90e-09!102;UBERON:0002193!1.68e-08!112;UBERON:0000924!1.78e-08!173;UBERON:0006601!1.78e-08!173;UBERON:0000153!4.57e-08!129;UBERON:0007811!4.57e-08!129;UBERON:0004121!1.04e-07!169;UBERON:0000033!7.17e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.23e-16;22!UBERON:0001869;1.02e-15;32!UBERON:0001893;1.80e-15;34!UBERON:0002791;2.25e-15;32!UBERON:0002780;3.03e-15;41!UBERON:0001890;3.03e-15;41!UBERON:0003528;3.26e-15;34!UBERON:0002020;3.26e-15;34!UBERON:0001950;1.42e-14;20!UBERON:0000073;3.08e-13;53!UBERON:0002616;3.08e-13;53!UBERON:0000956;1.24e-12;25!UBERON:0000203;1.24e-12;25!UBERON:0007023;4.47e-12;114!UBERON:0000955;3.96e-09;68!UBERON:0001017;2.02e-08;75!UBERON:0002420;1.85e-07;9!UBERON:0007245;1.85e-07;9!UBERON:0010009;1.85e-07;9!UBERON:0010011;1.85e-07;9!UBERON:0000454;1.85e-07;9!UBERON:0001016;2.81e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.55e-46,114;UBERON:0001049,3.58e-24,56;UBERON:0005068,3.58e-24,56;UBERON:0006241,3.58e-24,56;UBERON:0007135,3.58e-24,56;UBERON:0000073,7.11e-23,53;UBERON:0002616,7.11e-23,53;UBERON:0002780,1.11e-20,41;UBERON:0001890,1.11e-20,41;UBERON:0003080,1.11e-20,41;UBERON:0006240,1.11e-20,41;UBERON:0001017,1.36e-18,81;UBERON:0001893,5.57e-18,34;UBERON:0003528,9.92e-18,34;UBERON:0002020,9.92e-18,34;UBERON:0001869,1.91e-17,32;UBERON:0000955,2.15e-17,68;UBERON:0006238,2.15e-17,68;UBERON:0002791,5.64e-17,32;UBERON:0001016,2.96e-16,89;UBERON:0002619,6.72e-16,22;UBERON:0001950,1.50e-14,20;UBERON:0002346,2.04e-14,86;UBERON:0003075,1.72e-13,82;UBERON:0007284,1.72e-13,82;UBERON:0000956,1.15e-12,25;UBERON:0000203,1.15e-12,25;UBERON:0002390,2.46e-12,98;UBERON:0003061,2.46e-12,98;UBERON:0002193,5.37e-11,108;UBERON:0003056,1.79e-10,61;UBERON:0010371,2.12e-09,104;UBERON:0002420,2.31e-07,9;UBERON:0007245,2.31e-07,9;UBERON:0010009,2.31e-07,9;UBERON:0010011,2.31e-07,9;UBERON:0000454,2.31e-07,9;UBERON:0002405,3.12e-07,93 | |||
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| |||
|short_description=p3@PCMTD1 | |||
}} |
Latest revision as of 11:10, 18 September 2015
Short description: | p3@PCMTD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCMTD1_5end |
Coexpression cluster: | C468_Neutrophils_Eosinophils_cerebellum_occipital_Whole_temporal_parietal |
Association with transcript: | 3bp_to_ENST00000544451, NM_052937, uc003xqw.3, uc003xqx.3, uc010lya.2, uc011ldn.1_5end |
EntrezGene: | PCMTD1 |
HGNC: | 30483 |
UniProt: | F5H1M8Q96MG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.27e-19 | 136 |
hematopoietic stem cell | 5.60e-19 | 168 |
hematopoietic oligopotent progenitor cell | 1.15e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-16 | 161 |
hematopoietic cell | 2.95e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 2.51e-14 | 120 |
nongranular leukocyte | 5.25e-13 | 115 |
myeloid cell | 3.60e-11 | 108 |
common myeloid progenitor | 3.60e-11 | 108 |
myeloid leukocyte | 5.81e-11 | 72 |
granulocyte monocyte progenitor cell | 1.26e-08 | 67 |
myeloid lineage restricted progenitor cell | 1.51e-08 | 66 |
macrophage dendritic cell progenitor | 1.70e-07 | 61 |
mature alpha-beta T cell | 3.48e-07 | 18 |
alpha-beta T cell | 3.48e-07 | 18 |
immature T cell | 3.48e-07 | 18 |
mature T cell | 3.48e-07 | 18 |
immature alpha-beta T cell | 3.48e-07 | 18 |
monopoietic cell | 4.01e-07 | 59 |
monocyte | 4.01e-07 | 59 |
monoblast | 4.01e-07 | 59 |
promonocyte | 4.01e-07 | 59 |