FFCP PHASE1:Hg19::chr10:52383145..52383177,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=259230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29799 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-398bp_to_uc009xou.1_5end | |||
|cluster_id=chr10:52383145..52383177,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_SGMS1_5end | |||
|id=chr10:52383145..52383177,- | |||
|ontology_enrichment_celltype=CL:0000738!8.01e-22!140;CL:0002031!7.87e-20!124;CL:0000037!1.52e-16!172;CL:0000566!1.52e-16!172;CL:0002087!1.64e-16!119;CL:0002032!2.64e-16!165;CL:0000837!2.64e-16!165;CL:0000988!2.32e-15!182;CL:0000766!2.89e-11!76;CL:0000791!5.47e-10!18;CL:0000789!5.47e-10!18;CL:0002420!5.47e-10!18;CL:0002419!5.47e-10!18;CL:0000790!5.47e-10!18;CL:0000838!7.07e-10!52;CL:0000839!1.64e-09!70;CL:0000542!2.40e-09!53;CL:0000051!2.40e-09!53;CL:0000557!4.16e-09!71;CL:0000763!5.17e-08!112;CL:0000049!5.17e-08!112;CL:0002009!7.60e-08!65;CL:0002057!1.01e-07!42;CL:0000084!2.53e-07!25;CL:0000827!2.53e-07!25;CL:0000625!3.88e-07!11;CL:0002194!5.57e-07!63;CL:0000576!5.57e-07!63;CL:0000040!5.57e-07!63;CL:0000559!5.57e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.62e-14;18!CL:0000789;1.62e-14;18!CL:0002419;1.62e-14;18!CL:0000084;2.19e-11;25!CL:0000542;7.56e-10;53!CL:0000236;7.96e-10;13!CL:0000625;8.11e-10;11!CL:0002087;1.44e-07;104!CL:0000624;1.50e-07;6!CL:0000738;5.24e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.87e-28,136;CL:0002031,1.09e-26,120;CL:0000988,3.16e-22,177;CL:0000037,3.80e-22,168;CL:0002087,5.44e-22,115;CL:0002032,8.50e-21,161;CL:0000837,8.50e-21,161;CL:0000838,2.10e-15,52;CL:0000542,6.55e-15,53;CL:0000051,6.55e-15,53;CL:0000791,1.35e-14,18;CL:0000789,1.35e-14,18;CL:0002420,1.35e-14,18;CL:0002419,1.35e-14,18;CL:0000790,1.35e-14,18;CL:0000766,1.02e-11,72;CL:0000084,1.89e-11,25;CL:0000827,1.89e-11,25;CL:0000839,2.20e-10,66;CL:0000557,4.04e-10,67;CL:0000625,7.73e-10,11;CL:0000236,4.59e-09,14;CL:0000763,4.17e-08,108;CL:0000049,4.17e-08,108;CL:0002009,4.36e-08,61;CL:0000624,1.27e-07,6;CL:0000473,5.06e-07,48;CL:0000234,5.06e-07,48;CL:0002194,7.46e-07,59;CL:0000576,7.46e-07,59;CL:0000040,7.46e-07,59;CL:0000559,7.46e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000790;1.62e-14;18!CL:0000051;7.56e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.53e-28!115;UBERON:0002390!1.36e-13!102;UBERON:0003061!1.36e-13!102;UBERON:0002193!1.01e-11!112;UBERON:0001049!4.06e-08!57;UBERON:0005068!4.06e-08!57;UBERON:0006241!4.06e-08!57;UBERON:0007135!4.06e-08!57;UBERON:0000178!1.38e-07!15;UBERON:0000179!1.38e-07!15;UBERON:0000463!1.38e-07!15;UBERON:0002371!3.78e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.99e-11;15!UBERON:0000179;2.99e-11;15!UBERON:0000463;2.99e-11;15!UBERON:0007023;4.57e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.30e-21,114;UBERON:0002390,7.01e-17,98;UBERON:0003061,7.01e-17,98;UBERON:0002193,2.48e-15,108;UBERON:0000178,1.86e-11,15;UBERON:0000179,1.86e-11,15;UBERON:0000463,1.86e-11,15;UBERON:0002405,1.21e-08,93;UBERON:0002371,7.92e-08,76 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0.534893840235659,0.328402357799783,0.787107813136792,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0.369754010166788,0,0.142169232487422,0,3.32397245119126,4.41197784434312,3.68918480216948,2.23915474239924,1.6194683300949,2.06060454107349,1.59938062657521,1.51150377475524,1.69808842831471,1.16214518452842,1.6446715520873,0.619412741790207,2.01384674625505,1.0246428261164,1.18241114944293,1.03423704220986,0.645484683583826,0,0.941211697713023,2.45615535052061,1.57306439111559,0.612167784741805,1.60464513538047,0.639337125799041,0.329851300186716,0.797854630486527,0.426224750532694,0.290209238628584,2.26954089876456,2.4912889959823,0.75374599577023,1.0429658368404,1.3031330682307,0,1.10483290796269,0.316462387440884,0.211255286311942,1.06302149982522,0.628975936525128,0.898629049171961,0.600707571366025,0,0,0,1.0959849225878,3.51992488922645,3.27683166757279,3.55803701545422,2.98711155796555,2.00197993518006,2.87376219977242,1.32208974556972,2.86216126360609,3.41527781465669,2.93618594685469,2.29363936875137,2.64342657158052,3.92355994087075,0.263384084775077,3.14735632182133,3.14408610199332,2.2616164889946,0.167186495390678,3.2592226663359,3.31413464014313,0,0.222820913770347,3.53527088969805,3.32300841875432,6.22848886659536,0,0.780356085359269,0.328875809207352,0.276350017785848,0,2.22429844743091,2.40786745280742,2.09071047609954,0.226618685395132,1.91610246800961,3.09264700934367,1.77113784413652,4.45991580053735,1.30216690771284,2.85135613334512,2.86092726247768,2.17577238962511,3.74792179657038,1.18388626022008,0.821127996921047,3.42731463482045,4.27904313253612,2.89648807765598,2.43806866313962,0,0.12786256184353,0,0,0.579386075843295,0.795285947051099,0.486634870302636,0,0,0.263504357079378,1.17881167947941,0.364295288292542,0,1.29818957461873,0.870648686496336,0.531831842075461,0,0,1.11437250398869,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0,0,1.77883131343355,0.33472061276467,0,0.760272105718513,1.70843440283719,0.367663080345869,0,0.267899184852239,0.673588117878509,0.112611480483322,0,1.89853131913626,0,14.495845917967,31.022421131866,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,1.14734648299525,0.709336764396714,0,0,0,0.622422070799533,0.134710672069688,0,0.605429710579726,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,1.35214253015937,0,0.179389635688862,0.85422955527427,0.635795703478686,0,0.824420233907511,0.515281080091258,0.37223371266318,0,0,0,0.920498986422993,0.484938170456436,1.77504796258307,0.201504196455281,0.169560592310488,0.193260853163297,0.818238361772504,0.286804595389004,0.121973706129595,0.397589304964456,0.116193942869518,0.207322110030741,0,0.36497735907583,0,1.28648187638577,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0.833296006426766,0.977424915930974,0,0,0.115930404975077,0.352226082707465,0.288732895522148,0,0,0,0,2.21595305478658,1.17002132569619,0.297262324577456,0,0.335964256397719,0,0,0,0.766765358330422,2.46331618947972,0.176096868026452,4.76854665743776,7.06187771743111,6.56460653817176,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0.57191197463259,0.542621605391443,0,0,0,0,0.301439377059586,0.871533458600294,0.399891964728228,1.2162378064119,1.00451418286425,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,3.54655368363469,2.58753089831421,2.05348858047597,0,1.30139853857622,0,0,0,20.2231896465739,11.966458368161,25.2793463195982,0.49076596687656,0,0,0.207970861530807,0,0.157702415033935,0.35142424497814,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,2.27444828735176,1.50999940573032,2.24127871387233,0.303127571446259,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0.328508624055237,0,0,0.120859449591622,0,0.0920809889358963,0.574072240823034,0,0.786746489756545,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,4.16593765627276,3.92153176537351,0,0,0,2.67906630284078,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0.290033387828457,0.170453254832202,0.178064071293475,0,0.192190067365106,1.02090169995667,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.571890581771475,0,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.409499734223957,1.1312434556297,0,0,0.66343897524122,0,0.578775534266688,0,0.405820753925408,0.30982349809975,0,0,0.0982490410131212,0,0,0.844430541190656,1.31717957183961,0,0.699869440489966,0.0962221127255121,0,1.08890984861323,2.16530741786592,0,0,0,0,2.02979043692868,0.764637207142375,2.27858874869665,4.2881719582402,4.52498500394814,2.59389324477087,4.86028293514303,3.17250070517708,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0.423347165447766,0.324621940274555,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0.278406173895242,0,0.811367035427949,0.33307196799782,2.81974010175699,0,2.05111450980652,0,1.00299045849731,0.568272293612826,1.43246690842614,0.593929361665277,0,0,1.96937182974718,0.445234820091624,0,0,1.59398390600856,0.828851746593443,0,0.409074730008619,0.123084805461069,0,0,0.179021174675609,0,1.1837208676432,0,0,0.969332746095218,0.74214478529481,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0.173624994933292,3.54296554325536,1.68835014075571,1.52581736317083,0.331737779793674,0.886642856860642,0.87754158861589,0.10893846351899,0.557694977114413,1.30815439456455,0.227884111694002,0,0,0.217294743844016,0.31900115973192,0,0,0,0,0,0.676786981851542,0.980312671588698,2.18168063068596,0.569261198172555,0,0,0,0,0,0,1.50377859655677,0,2.96521128680622,1.60633120630454,1.56632924258183,1.48282492557489,0.802577647298789,0.937057782901357,0,0,0,1.57833761139756,0,0.61214552326098,0.821425535170343,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,1.7472666824203,0.859930162358083,0,0.219267951258557,0,1.35784623083787,0.176512253383001,0.90392296312213,0,0.19871461170299,0.569797163602908,0,0.0801588202515337,1.49417096317547,0.39961921916426,0,0.114536596165916,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0.203996435272644,0,0.600420288709789,0.958337652243951,0,0.429765441419957,0.788662062837943,1.39641200636127,1.60412296808179,0,0.199679000498991,0.429226048136571,1.33902874465124,0.604651252380536,0.720599767084807,0,0,0.164831716762333,0.202210631562555,0,0,0.795229689809303,1.90684768556206,0.321506296930038,0.550157746388935,1.24632101408756,4.27450393947851,7.7380195455795,1.76173714308272,1.0063040627978,1.49730843868477,0.944182586429966,0.105600336519406,0.717149357331379,0.191915197319445,0.714695326373367,0,0,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0,1.31897010310274,5.30027555648885,1.0342636508924,0.26446520348538,0.171086837884329,1.40963004463334,0.961086713109252,1.57204305099666,2.07119527673598,0,0,0.121792598380896,0,1.08803560673895,1.2534494701135,0.612691153526923,1.96723578425883,0,0,1.58634144372552,0.751145584238999,3.44045517414043,3.21694249456872,0.931446044120752,0,0.249960815924213,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0.889811221596536,0.457680136793847,0.302461847526478,0,0.443565449968902,0,0,0.310525913752519,0,0,0,0.300515217994437,0.380805212168795,0,0,0.322231671127465,0,0,0,0,1.01024846629776,1.26184898228651,0,0,0.260994291965212,0,0.231522474323834,0,0.179088841081487,0.617602894321944,0.219284049578707,0.176689145945881,0.38582807654183,1.35153952522458,0,0.345430341731199,0.607719912354764,1.93561810612423,0.389720617678777,0.132864840313363,0.327130788511688,0,0,0,1.9998739585493,0.106691729694141,0.344429959321631,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0.318004350653419,0.47317047000752,0,0.352675943690684,0.3062454773532,0.834979926253974,0,0.957803154342908,0.615349092722265,0,0.622415272177961,0.645902582527404,1.42769420259154,1.27592034051333,0,0.183428598521679,0,0,0,0,1.5794168953344,0,1.56302802246618,0,0,0.295712172434091,0.87798860003913,0.781078098613847,0.206686796501184,1.33173201407204,0.546974809018219,0.548257766857182,1.98484471355718,0.703484977438482,0.127762427639595,4.28561468702629,4.03540466662589,1.82089681270989,1.59363533945908,0.354809480650555,0,0.514464028312255,0.951576261675644,0.789273282754189,0.118193840883968,0,1.25588948560822,0.942693539496011,0.560544326627578,0.913158720509496,0.215927591218621,0.47775168788705,3.78825684136279,0,0,0,0,0.62164849248911,1.0243108625637,0.691259661814092,1.29068207646083,0.118332000730565,0,2.11693525095465,0.68732060563215,0,0,0,0,0.243835849964539,0,0.410651227424988,0,0.485710993059139,0,0,0,0,0,0,0.617393264863557,0,0,0.735444965261716,0,1.96308467114945,1.48523200163543,1.2679671827502,0,0.751871343838829,2.51385763096951,1.19929387109915,0.357107877211315,0,0.320965466756673,0.730336388246517,1.37618785021362,1.43339583151451,0.315543124386369,0.747906392100062,0,1.5870805215462,0.743990036333503,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,2.1218035501107,0.535928260312357,2.48750831837634,1.13776295448085,1.91910583710883,2.14257988317366,2.26061184426021,1.67601728598816,0,2.60953348940476,1.81905470062397,0.870866991587845,0.684466602170562,1.0776328482334,1.93649954560226,0.665320713092027,0,0.106727345877715,0,0.269475606319761,0,1.95586310692586,0,4.66029741929859,2.21401172950129,0 | |||
|short_description=p6@SGMS1 | |||
}} |
Latest revision as of 11:11, 18 September 2015
Short description: | p6@SGMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SGMS1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -398bp_to_uc009xou.1_5end |
EntrezGene: | SGMS1 |
HGNC: | 29799 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.30e-21 | 114 |
hematopoietic system | 7.01e-17 | 98 |
blood island | 7.01e-17 | 98 |
hemolymphoid system | 2.48e-15 | 108 |
blood | 1.86e-11 | 15 |
haemolymphatic fluid | 1.86e-11 | 15 |
organism substance | 1.86e-11 | 15 |
immune system | 1.21e-08 | 93 |
bone marrow | 7.92e-08 | 76 |