FFCP PHASE1:Hg19::chr1:167599460..167599476,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92241 | |EntrezGene=92241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28310 | |HGNC=28310 | ||
|TSSclassifier=strong | |||
|UniProt=Q6JBY9 | |UniProt=Q6JBY9 | ||
|association_with_transcript=0bp_to_NM_052862,uc001gem.2,uc010pli.1_5end | |association_with_transcript=0bp_to_NM_052862,uc001gem.2,uc010pli.1_5end | ||
|cluster_id=chr1:167599460..167599476,+ | |||
|description=CAGE_peak_2_at_RCSD1_5end | |description=CAGE_peak_2_at_RCSD1_5end | ||
|id=chr1:167599460..167599476,+ | |id=chr1:167599460..167599476,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.20e-68!172;CL:0000566!3.20e-68!172;CL:0000988!1.90e-64!182;CL:0002032!4.25e-63!165;CL:0000837!4.25e-63!165;CL:0000738!1.94e-54!140;CL:0002087!1.40e-47!119;CL:0002031!1.85e-45!124;CL:0000763!1.44e-32!112;CL:0000049!1.44e-32!112;CL:0000542!6.32e-28!53;CL:0000051!6.32e-28!53;CL:0000838!2.51e-27!52;CL:0000766!7.58e-23!76;CL:0000557!3.29e-19!71;CL:0000839!5.94e-19!70;CL:0002194!1.29e-17!63;CL:0000576!1.29e-17!63;CL:0000040!1.29e-17!63;CL:0000559!1.29e-17!63;CL:0002009!5.61e-17!65;CL:0002057!2.18e-16!42;CL:0000860!4.73e-14!45;CL:0000945!1.16e-13!24;CL:0000826!1.16e-13!24;CL:0000084!3.80e-13!25;CL:0000827!3.80e-13!25;CL:0000791!9.69e-12!18;CL:0000789!9.69e-12!18;CL:0002420!9.69e-12!18;CL:0002419!9.69e-12!18;CL:0000790!9.69e-12!18;CL:0000236!2.12e-10!14;CL:0000134!1.26e-08!358;CL:0002320!9.15e-08!365;CL:0000625!3.93e-07!11 | |ontology_enrichment_celltype=CL:0000037!3.20e-68!172;CL:0000566!3.20e-68!172;CL:0000988!1.90e-64!182;CL:0002032!4.25e-63!165;CL:0000837!4.25e-63!165;CL:0000738!1.94e-54!140;CL:0002087!1.40e-47!119;CL:0002031!1.85e-45!124;CL:0000763!1.44e-32!112;CL:0000049!1.44e-32!112;CL:0000542!6.32e-28!53;CL:0000051!6.32e-28!53;CL:0000838!2.51e-27!52;CL:0000766!7.58e-23!76;CL:0000557!3.29e-19!71;CL:0000839!5.94e-19!70;CL:0002194!1.29e-17!63;CL:0000576!1.29e-17!63;CL:0000040!1.29e-17!63;CL:0000559!1.29e-17!63;CL:0002009!5.61e-17!65;CL:0002057!2.18e-16!42;CL:0000860!4.73e-14!45;CL:0000945!1.16e-13!24;CL:0000826!1.16e-13!24;CL:0000084!3.80e-13!25;CL:0000827!3.80e-13!25;CL:0000791!9.69e-12!18;CL:0000789!9.69e-12!18;CL:0002420!9.69e-12!18;CL:0002419!9.69e-12!18;CL:0000790!9.69e-12!18;CL:0000236!2.12e-10!14;CL:0000134!1.26e-08!358;CL:0002320!9.15e-08!365;CL:0000625!3.93e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.87e-18;53!CL:0002087;7.37e-16;104!CL:0000945;3.68e-15;24!CL:0000084;1.06e-14;25!CL:0000576;1.05e-13;48!CL:0000860;3.72e-13;33!CL:0002057;3.72e-13;33!CL:0000738;4.87e-13;136!CL:0000791;5.67e-13;18!CL:0000789;5.67e-13;18!CL:0002419;5.67e-13;18!CL:0000473;7.93e-13;39!CL:0000234;7.93e-13;39!CL:0000988;1.25e-12;177!CL:0000766;1.52e-12;69!CL:0000763;1.76e-12;100!CL:0000236;3.91e-11;13!CL:0000625;8.26e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.99e-76,168;CL:0000988,1.31e-72,177;CL:0002032,1.71e-70,161;CL:0000837,1.71e-70,161;CL:0000738,1.38e-62,136;CL:0002087,6.30e-57,115;CL:0002031,3.89e-53,120;CL:0000763,4.61e-36,108;CL:0000049,4.61e-36,108;CL:0000542,2.49e-31,53;CL:0000051,2.49e-31,53;CL:0000838,1.17e-30,52;CL:0000766,2.42e-28,72;CL:0000557,3.79e-24,67;CL:0000839,1.18e-22,66;CL:0002194,2.57e-22,59;CL:0000576,2.57e-22,59;CL:0000040,2.57e-22,59;CL:0000559,2.57e-22,59;CL:0002009,1.43e-21,61;CL:0000473,6.12e-20,48;CL:0000234,6.12e-20,48;CL:0000860,3.24e-18,42;CL:0002057,3.24e-18,42;CL:0000945,3.77e-15,24;CL:0000826,3.77e-15,24;CL:0000084,1.04e-14,25;CL:0000827,1.04e-14,25;CL:0000791,5.41e-13,18;CL:0000789,5.41e-13,18;CL:0002420,5.41e-13,18;CL:0002419,5.41e-13,18;CL:0000790,5.41e-13,18;CL:0000236,1.73e-11,14;CL:0000134,1.30e-10,354;CL:0002320,8.54e-10,361;CL:0000625,8.04e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.87e-18;53!CL:0002057;1.65e-13;42!CL:0000790;5.67e-13;18!CL:0000049;1.13e-10;108 | |||
|ontology_enrichment_disease=DOID:2531!3.22e-17!51;DOID:0060083!3.22e-17!51;DOID:1240!6.51e-16!39;DOID:8692!5.91e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.10e-13;39!DOID:8692;1.12e-12;31!DOID:2531;4.97e-11;51!DOID:0060083;4.97e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.19e-18,51;DOID:0060083,1.19e-18,51;DOID:1240,2.54e-17,39;DOID:8692,6.83e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.14e-24!102;UBERON:0003061!1.14e-24!102;UBERON:0002193!7.67e-24!112;UBERON:0007023!1.64e-19!115;UBERON:0002371!6.12e-16!80;UBERON:0002405!2.05e-14!115;UBERON:0001474!4.92e-13!86;UBERON:0004765!9.24e-09!101;UBERON:0001434!9.24e-09!101;UBERON:0002384!3.07e-07!375;UBERON:0000178!4.85e-07!15;UBERON:0000179!4.85e-07!15;UBERON:0000463!4.85e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.43e-07;15!UBERON:0000179;1.43e-07;15!UBERON:0000463;1.43e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.49e-30,98;UBERON:0003061,2.49e-30,98;UBERON:0002193,7.45e-28,108;UBERON:0002405,2.16e-21,93;UBERON:0002371,1.36e-20,76;UBERON:0001474,2.37e-17,82;UBERON:0007023,3.67e-17,114;UBERON:0004765,8.00e-14,90;UBERON:0001434,7.96e-11,100;UBERON:0003081,8.75e-10,203;UBERON:0002384,1.09e-08,371;UBERON:0000178,1.02e-07,15;UBERON:0000179,1.02e-07,15;UBERON:0000463,1.02e-07,15 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376627918784408,4.35556412763322,5.58284008259631,6.37557328640802,19.2748495655963,15.3531759238885,23.2224184974114,0,0,0,35.4799778657781,21.7518925705755,24.6624369041272,23.8218025668707,29.0789448831705,36.2408154095473,17.689322464954,10.0407036465884,20.3484698431007,14.3944256391769,18.5159212407517,11.886618998203,12.0863099190956,15.2132118568076,11.7688420940139,10.0692337312753,14.3449995656296,6.85798466676897,18.2715210790408,28.4013260776883,24.3767675869815,16.188841200664,10.3704337021981,4.26974620445661,11.3251040177234,7.06043859567406,7.67204550958849,8.57613380485462,16.7549472402171,14.0654167675789,6.38460324982885,6.80862269629368,4.35975574296902,15.8286659111748,13.5585558789252,8.90474263290978,7.26479403160043,4.78760926783834,5.37986058649504,9.92899845666126,10.2050063983221,10.4829322754188,23.7013411719105,19.2226422837128,23.4659356577737,9.4054205434612,7.16100037916724,6.94123784305609,26.3994366691984,22.9378216730095,21.3482220927253,22.6167017960249,23.6233632351247,27.5881171178152,19.8313461835459,31.483773899667,39.2756948685519,36.9959429303691,53.518251937532,35.686258716337,19.0572911413722,22.3876472058815,26.7525287354813,26.7247318669432,37.8306758159097,30.9295016472754,25.7478590640536,26.0396293154103,37.0170783975031,30.6378756434227,30.3444084699082,33.894685871294,25.1847593301464,39.9644917544107,34.3356677558079,26.9678163550029,25.4242016362981,20.5760190871887,19.722112900554,27.021623637061,38.6781438078414,28.8938823878794,24.526111590523,28.1774505295757,18.2174178254042,20.7067519310663,34.5074230543902,14.2567806667256,18.5207396465661,19.9659113400893,16.240994451805,18.4686256594333,18.8859439291841,16.3301462012033,25.4068185994332,30.1234760076222,2.43806866313962,1.34140171940727,1.53435074212236,0,0,0,0,0,0,0,0.351339142772504,2.81605012320082,0,0,2.59637914923747,2.96020553408754,2.6591592103773,20.7486843145648,17.1598473234038,27.4878550983878,0,0,0,0,0,0,0,0.258416759169329,0,1.33888245105868,1.20848795132744,2.28081631715554,4.88124115096339,0,0,0.0892997282840798,0.22452937262617,0.675668882899933,0,0,0,14.495845917967,19.3890132074163,0,0.496971951695318,0,0,0,1.41867352879343,0,1.06748995729705,0,0.622422070799533,0.942974704487816,2.12500474047496,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.813357600086629,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,2.80483547606892,0.4115740113314,1.47008711385542,0,0,1.77236972004421,22.0731549707325,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0.721832238805369,0.925971025153221,1.52203321787679,0,0,9.84868024349589,1.40402559083543,6.09387765383786,0,0,0,0.358234090811393,0,0,1.47798971368783,2.90559832243646,19.9034990919141,21.7621129659612,15.0228495777392,0,0,0,0,0,0,0,0.448524337381443,0,0,0,10.7296933755565,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,19.4598049025905,11.5519131029389,6.32501818449095,0,0,0,0,0.205476322550383,0.179060963239896,34.4101392060129,17.5357376579715,22.6408953602493,25.5402642196699,0,0,0,0.335032530668698,0,11.9841123831549,29.9161459204025,10.7748033493369,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,1.37257369524342,25.639235239238,25.4542756965968,30.5240815317851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4120015221269,0.850468526382578,1.94324324491925,1.54227252690289,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,4.53380451249978,0,0,0,0,0,0,1.07834031980251,0.921022048356777,3.1702411671442,0.214840489736547,0.290033387828457,1.70453254832202,0.979352392114111,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.719489830333259,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,3.29503302718727,0,0,0,0,16.7457711046616,15.2927441428475,18.7983571767474,14.0556747520096,9.04997000789627,14.2664128462398,12.4207230564766,11.8968776444141,0,0,0,22.8537905404634,60.0159925982011,32.9386734703157,18.812300182001,18.1617228003863,16.2779564612512,15.2404979561196,18.1788286553751,19.9365996460556,22.1387638662196,6.11051593514791,32.5824820217087,27.4252680038597,14.9346909846441,30.4717557858482,22.144004359897,10.3051603426729,21.5068535015921,16.3283558761464,16.351215887767,23.0557952574408,21.4372753899337,19.693983831634,0,0.33307196799782,0,0,4.8347699159725,0,14.2647531875172,0,0,1.48482340416319,0,0.994147647766298,2.39138007897872,0,0,0,4.98119970627674,28.7335272152394,0,0,11.3238021024184,0,0,0,73.1548489424427,9.37112353550869,31.1328020051022,0,2.90799823828566,1.29875337426592,0,0,0,8.69999490521752,0,0,0,0,0,0,2.65722415744152,2.17073589525734,0,0.995213339381022,0.591095237907095,3.72955175161753,0,0,2.6932590476329,0,0,0,0.977826347298073,0.638002319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| ||
|short_description=p2@RCSD1 | |short_description=p2@RCSD1 | ||
}} | }} |
Latest revision as of 11:30, 18 September 2015
Short description: | p2@RCSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RCSD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_052862, uc001gem.2, uc010pli.1_5end |
EntrezGene: | RCSD1 |
HGNC: | 28310 |
UniProt: | Q6JBY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.49e-30 | 98 |
blood island | 2.49e-30 | 98 |
hemolymphoid system | 7.45e-28 | 108 |
immune system | 2.16e-21 | 93 |
bone marrow | 1.36e-20 | 76 |
bone element | 2.37e-17 | 82 |
adult organism | 3.67e-17 | 114 |
skeletal element | 8.00e-14 | 90 |
skeletal system | 7.96e-11 | 100 |
lateral plate mesoderm | 8.75e-10 | 203 |
connective tissue | 1.09e-08 | 371 |
blood | 1.02e-07 | 15 |
haemolymphatic fluid | 1.02e-07 | 15 |
organism substance | 1.02e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.19e-18 | 51 |
immune system cancer | 1.19e-18 | 51 |
leukemia | 2.54e-17 | 39 |
myeloid leukemia | 6.83e-13 | 31 |