FFCP PHASE1:Hg19::chr1:167599481..167599507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92241 | |EntrezGene=92241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28310 | |HGNC=28310 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000461790,ENST00000472038,ENST00000475127_5end | |association_with_transcript=0bp_to_ENST00000461790,ENST00000472038,ENST00000475127_5end | ||
|cluster_id=chr1:167599481..167599507,+ | |||
|description=CAGE_peak_1_at_RCSD1_5end | |description=CAGE_peak_1_at_RCSD1_5end | ||
|id=chr1:167599481..167599507,+ | |id=chr1:167599481..167599507,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.14e-65!172;CL:0000566!1.14e-65!172;CL:0000988!1.44e-62!182;CL:0002032!5.48e-61!165;CL:0000837!5.48e-61!165;CL:0000738!2.90e-52!140;CL:0002087!8.90e-46!119;CL:0002031!7.45e-43!124;CL:0000763!1.67e-30!112;CL:0000049!1.67e-30!112;CL:0000542!2.33e-28!53;CL:0000051!2.33e-28!53;CL:0000838!1.14e-27!52;CL:0000766!7.26e-21!76;CL:0000839!1.05e-16!70;CL:0000557!1.37e-16!71;CL:0002194!6.00e-16!63;CL:0000576!6.00e-16!63;CL:0000040!6.00e-16!63;CL:0000559!6.00e-16!63;CL:0002057!2.44e-15!42;CL:0002009!2.58e-15!65;CL:0000945!1.88e-14!24;CL:0000826!1.88e-14!24;CL:0000860!4.33e-13!45;CL:0000084!5.89e-13!25;CL:0000827!5.89e-13!25;CL:0000791!2.03e-11!18;CL:0000789!2.03e-11!18;CL:0002420!2.03e-11!18;CL:0002419!2.03e-11!18;CL:0000790!2.03e-11!18;CL:0000236!2.48e-11!14;CL:0000625!2.52e-07!11;CL:0000134!2.79e-07!358 | |ontology_enrichment_celltype=CL:0000037!1.14e-65!172;CL:0000566!1.14e-65!172;CL:0000988!1.44e-62!182;CL:0002032!5.48e-61!165;CL:0000837!5.48e-61!165;CL:0000738!2.90e-52!140;CL:0002087!8.90e-46!119;CL:0002031!7.45e-43!124;CL:0000763!1.67e-30!112;CL:0000049!1.67e-30!112;CL:0000542!2.33e-28!53;CL:0000051!2.33e-28!53;CL:0000838!1.14e-27!52;CL:0000766!7.26e-21!76;CL:0000839!1.05e-16!70;CL:0000557!1.37e-16!71;CL:0002194!6.00e-16!63;CL:0000576!6.00e-16!63;CL:0000040!6.00e-16!63;CL:0000559!6.00e-16!63;CL:0002057!2.44e-15!42;CL:0002009!2.58e-15!65;CL:0000945!1.88e-14!24;CL:0000826!1.88e-14!24;CL:0000860!4.33e-13!45;CL:0000084!5.89e-13!25;CL:0000827!5.89e-13!25;CL:0000791!2.03e-11!18;CL:0000789!2.03e-11!18;CL:0002420!2.03e-11!18;CL:0002419!2.03e-11!18;CL:0000790!2.03e-11!18;CL:0000236!2.48e-11!14;CL:0000625!2.52e-07!11;CL:0000134!2.79e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.23e-18;53!CL:0000945;1.14e-15;24!CL:0002087;2.53e-15;104!CL:0000084;4.14e-14;25!CL:0000738;8.53e-13;136!CL:0000576;1.08e-12;48!CL:0000988;1.49e-12;177!CL:0000791;2.55e-12;18!CL:0000789;2.55e-12;18!CL:0002419;2.55e-12;18!CL:0000763;3.91e-12;100!CL:0000236;6.47e-12;13!CL:0000766;1.74e-11;69!CL:0000473;8.36e-11;39!CL:0000234;8.36e-11;39!CL:0000860;8.71e-11;33!CL:0002057;8.71e-11;33!CL:0000625;7.36e-08;11 | |ontology_enrichment_celltype_v019=CL:0000542;2.23e-18;53!CL:0000945;1.14e-15;24!CL:0002087;2.53e-15;104!CL:0000084;4.14e-14;25!CL:0000738;8.53e-13;136!CL:0000576;1.08e-12;48!CL:0000988;1.49e-12;177!CL:0000791;2.55e-12;18!CL:0000789;2.55e-12;18!CL:0002419;2.55e-12;18!CL:0000763;3.91e-12;100!CL:0000236;6.47e-12;13!CL:0000766;1.74e-11;69!CL:0000473;8.36e-11;39!CL:0000234;8.36e-11;39!CL:0000860;8.71e-11;33!CL:0002057;8.71e-11;33!CL:0000625;7.36e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.33e-76,168;CL:0000988,1.05e-72,177;CL:0002032,3.87e-71,161;CL:0000837,3.87e-71,161;CL:0000738,1.63e-61,136;CL:0002087,2.75e-54,115;CL:0002031,5.39e-51,120;CL:0000763,7.53e-37,108;CL:0000049,7.53e-37,108;CL:0000542,5.16e-31,53;CL:0000051,5.16e-31,53;CL:0000838,2.94e-30,52;CL:0000766,3.90e-26,72;CL:0000839,2.92e-21,66;CL:0000557,3.55e-21,67;CL:0002194,1.78e-20,59;CL:0000576,1.78e-20,59;CL:0000040,1.78e-20,59;CL:0000559,1.78e-20,59;CL:0002009,1.03e-19,61;CL:0000473,1.68e-18,48;CL:0000234,1.68e-18,48;CL:0000860,1.23e-16,42;CL:0002057,1.23e-16,42;CL:0000945,1.15e-15,24;CL:0000826,1.15e-15,24;CL:0000084,3.84e-14,25;CL:0000827,3.84e-14,25;CL:0000791,2.39e-12,18;CL:0000789,2.39e-12,18;CL:0002420,2.39e-12,18;CL:0002419,2.39e-12,18;CL:0000790,2.39e-12,18;CL:0000236,2.99e-12,14;CL:0000134,4.38e-09,354;CL:0002320,2.66e-08,361;CL:0000625,7.19e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;2.23e-18;53!CL:0000790;2.55e-12;18!CL:0002057;3.53e-12;42!CL:0000049;5.67e-11;108 | |ontology_enrichment_development_v019=CL:0000051;2.23e-18;53!CL:0000790;2.55e-12;18!CL:0002057;3.53e-12;42!CL:0000049;5.67e-11;108 | ||
|ontology_enrichment_disease=DOID:2531!2.33e-16!51;DOID:0060083!2.33e-16!51;DOID:1240!3.53e-15!39;DOID:8692!4.28e-11!31 | |ontology_enrichment_disease=DOID:2531!2.33e-16!51;DOID:0060083!2.33e-16!51;DOID:1240!3.53e-15!39;DOID:8692!4.28e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;4.85e-13;39!DOID:8692;6.80e-12;31!DOID:2531;8.89e-11;51!DOID:0060083;8.89e-11;51 | |ontology_enrichment_disease_v019=DOID:1240;4.85e-13;39!DOID:8692;6.80e-12;31!DOID:2531;8.89e-11;51!DOID:0060083;8.89e-11;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.10e-17,51;DOID:0060083,1.10e-17,51;DOID:1240,1.46e-16,39;DOID:8692,4.37e-12,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.32e-24!102;UBERON:0003061!4.32e-24!102;UBERON:0002193!7.13e-24!112;UBERON:0007023!1.30e-22!115;UBERON:0002371!3.59e-14!80;UBERON:0002405!2.85e-13!115;UBERON:0001474!1.82e-11!86;UBERON:0000178!6.62e-09!15;UBERON:0000179!6.62e-09!15;UBERON:0000463!6.62e-09!15;UBERON:0004765!2.06e-07!101;UBERON:0001434!2.06e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!4.32e-24!102;UBERON:0003061!4.32e-24!102;UBERON:0002193!7.13e-24!112;UBERON:0007023!1.30e-22!115;UBERON:0002371!3.59e-14!80;UBERON:0002405!2.85e-13!115;UBERON:0001474!1.82e-11!86;UBERON:0000178!6.62e-09!15;UBERON:0000179!6.62e-09!15;UBERON:0000463!6.62e-09!15;UBERON:0004765!2.06e-07!101;UBERON:0001434!2.06e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.48e-09;15!UBERON:0000179;1.48e-09;15!UBERON:0000463;1.48e-09;15!UBERON:0007023;6.55e-07;114 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.48e-09;15!UBERON:0000179;1.48e-09;15!UBERON:0000463;1.48e-09;15!UBERON:0007023;6.55e-07;114 | ||
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| ||
|short_description=p1@RCSD1 | |short_description=p1@RCSD1 | ||
}} | }} |
Latest revision as of 11:30, 18 September 2015
Short description: | p1@RCSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RCSD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000461790, ENST00000472038, ENST00000475127_5end |
EntrezGene: | RCSD1 |
HGNC: | 28310 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.93e-29 | 98 |
blood island | 5.93e-29 | 98 |
hemolymphoid system | 3.18e-27 | 108 |
adult organism | 1.27e-24 | 114 |
immune system | 1.52e-19 | 93 |
bone marrow | 6.02e-18 | 76 |
bone element | 6.22e-15 | 82 |
skeletal element | 1.12e-11 | 90 |
blood | 1.35e-09 | 15 |
haemolymphatic fluid | 1.35e-09 | 15 |
organism substance | 1.35e-09 | 15 |
skeletal system | 6.69e-09 | 100 |
lateral plate mesoderm | 1.31e-07 | 203 |
connective tissue | 3.00e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.10e-17 | 51 |
immune system cancer | 1.10e-17 | 51 |
leukemia | 1.46e-16 | 39 |
myeloid leukemia | 4.37e-12 | 31 |