FFCP PHASE1:Hg19::chr1:167599532..167599568,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92241 | |EntrezGene=92241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28310 | |HGNC=28310 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000461790_5end | |association_with_transcript=29bp_to_ENST00000461790_5end | ||
|cluster_id=chr1:167599532..167599568,+ | |||
|coexpression_cluster_id=C590 | |||
|description=CAGE_peak_3_at_RCSD1_5end | |description=CAGE_peak_3_at_RCSD1_5end | ||
|id=chr1:167599532..167599568,+ | |id=chr1:167599532..167599568,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.61e-73!172;CL:0000566!2.61e-73!172;CL:0000988!4.18e-71!182;CL:0002032!2.47e-69!165;CL:0000837!2.47e-69!165;CL:0000738!1.69e-64!140;CL:0002087!5.75e-55!119;CL:0002031!6.29e-54!124;CL:0000763!1.65e-38!112;CL:0000049!1.65e-38!112;CL:0000766!1.97e-31!76;CL:0000542!4.09e-27!53;CL:0000051!4.09e-27!53;CL:0000557!6.75e-27!71;CL:0000838!1.71e-26!52;CL:0000839!9.52e-26!70;CL:0002009!1.50e-24!65;CL:0002194!2.31e-24!63;CL:0000576!2.31e-24!63;CL:0000040!2.31e-24!63;CL:0000559!2.31e-24!63;CL:0002057!2.04e-22!42;CL:0000860!1.70e-19!45;CL:0000945!8.03e-16!24;CL:0000826!8.03e-16!24;CL:0000236!4.09e-11!14;CL:0000084!1.13e-10!25;CL:0000827!1.13e-10!25;CL:0000134!3.59e-10!358;CL:0000791!1.63e-09!18;CL:0000789!1.63e-09!18;CL:0002420!1.63e-09!18;CL:0002419!1.63e-09!18;CL:0000790!1.63e-09!18;CL:0002320!3.22e-09!365;CL:0002393!3.02e-08!9;CL:0002397!3.02e-08!9;CL:0000094!6.19e-07!8 | |ontology_enrichment_celltype=CL:0000037!2.61e-73!172;CL:0000566!2.61e-73!172;CL:0000988!4.18e-71!182;CL:0002032!2.47e-69!165;CL:0000837!2.47e-69!165;CL:0000738!1.69e-64!140;CL:0002087!5.75e-55!119;CL:0002031!6.29e-54!124;CL:0000763!1.65e-38!112;CL:0000049!1.65e-38!112;CL:0000766!1.97e-31!76;CL:0000542!4.09e-27!53;CL:0000051!4.09e-27!53;CL:0000557!6.75e-27!71;CL:0000838!1.71e-26!52;CL:0000839!9.52e-26!70;CL:0002009!1.50e-24!65;CL:0002194!2.31e-24!63;CL:0000576!2.31e-24!63;CL:0000040!2.31e-24!63;CL:0000559!2.31e-24!63;CL:0002057!2.04e-22!42;CL:0000860!1.70e-19!45;CL:0000945!8.03e-16!24;CL:0000826!8.03e-16!24;CL:0000236!4.09e-11!14;CL:0000084!1.13e-10!25;CL:0000827!1.13e-10!25;CL:0000134!3.59e-10!358;CL:0000791!1.63e-09!18;CL:0000789!1.63e-09!18;CL:0002420!1.63e-09!18;CL:0002419!1.63e-09!18;CL:0000790!1.63e-09!18;CL:0002320!3.22e-09!365;CL:0002393!3.02e-08!9;CL:0002397!3.02e-08!9;CL:0000094!6.19e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002087;2.78e-18;104!CL:0000576;2.93e-18;48!CL:0000542;5.56e-18;53!CL:0000945;7.70e-18;24!CL:0000473;8.16e-17;39!CL:0000234;8.16e-17;39!CL:0000766;1.33e-16;69!CL:0000860;1.91e-16;33!CL:0002057;1.91e-16;33!CL:0000738;6.63e-16;136!CL:0000988;2.57e-14;177!CL:0000763;3.62e-14;100!CL:0000236;3.77e-12;13!CL:0000084;1.92e-11;25!CL:0000791;1.10e-10;18!CL:0000789;1.10e-10;18!CL:0002419;1.10e-10;18!CL:0000094;1.04e-07;8!CL:0000625;2.30e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.20e-84,168;CL:0000988,1.70e-81,177;CL:0002032,1.83e-79,161;CL:0000837,1.83e-79,161;CL:0000738,5.29e-76,136;CL:0002087,6.89e-67,115;CL:0002031,3.48e-63,120;CL:0000763,9.58e-45,108;CL:0000049,9.58e-45,108;CL:0000766,1.44e-39,72;CL:0000557,3.93e-34,67;CL:0002009,3.35e-32,61;CL:0002194,4.62e-32,59;CL:0000576,4.62e-32,59;CL:0000040,4.62e-32,59;CL:0000559,4.62e-32,59;CL:0000839,2.28e-31,66;CL:0000542,4.14e-30,53;CL:0000051,4.14e-30,53;CL:0000838,2.12e-29,52;CL:0000473,5.66e-29,48;CL:0000234,5.66e-29,48;CL:0000860,1.90e-25,42;CL:0002057,1.90e-25,42;CL:0000945,6.89e-18,24;CL:0000826,6.89e-18,24;CL:0000134,1.39e-12,354;CL:0000236,1.69e-12,14;CL:0002320,1.81e-11,361;CL:0000084,2.24e-11,25;CL:0000827,2.24e-11,25;CL:0000791,1.15e-10,18;CL:0000789,1.15e-10,18;CL:0002420,1.15e-10,18;CL:0002419,1.15e-10,18;CL:0000790,1.15e-10,18;CL:0002393,3.24e-09,9;CL:0002397,3.24e-09,9;CL:0000219,8.56e-08,386;CL:0000094,1.02e-07,8;CL:0000625,2.34e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.33e-18;42!CL:0000051;5.56e-18;53!CL:0000049;7.83e-13;108!CL:0000790;1.10e-10;18 | |||
|ontology_enrichment_disease=DOID:2531!3.14e-12!51;DOID:0060083!3.14e-12!51;DOID:1240!1.42e-10!39;DOID:8692!8.55e-08!31 | |ontology_enrichment_disease=DOID:2531!3.14e-12!51;DOID:0060083!3.14e-12!51;DOID:1240!1.42e-10!39;DOID:8692!8.55e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.11e-08;39!DOID:8692;2.98e-08;31!DOID:2531;7.58e-08;51!DOID:0060083;7.58e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.57e-13,51;DOID:0060083,7.57e-13,51;DOID:1240,4.60e-11,39;DOID:8692,1.73e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.11e-37!102;UBERON:0003061!9.11e-37!102;UBERON:0002193!9.70e-37!112;UBERON:0002371!5.36e-24!80;UBERON:0002405!9.11e-21!115;UBERON:0001474!3.60e-20!86;UBERON:0007023!3.09e-18!115;UBERON:0004765!5.64e-14!101;UBERON:0001434!5.64e-14!101;UBERON:0000178!1.94e-11!15;UBERON:0000179!1.94e-11!15;UBERON:0000463!1.94e-11!15;UBERON:0003081!1.28e-08!216;UBERON:0002384!5.29e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!9.11e-37!102;UBERON:0003061!9.11e-37!102;UBERON:0002193!9.70e-37!112;UBERON:0002371!5.36e-24!80;UBERON:0002405!9.11e-21!115;UBERON:0001474!3.60e-20!86;UBERON:0007023!3.09e-18!115;UBERON:0004765!5.64e-14!101;UBERON:0001434!5.64e-14!101;UBERON:0000178!1.94e-11!15;UBERON:0000179!1.94e-11!15;UBERON:0000463!1.94e-11!15;UBERON:0003081!1.28e-08!216;UBERON:0002384!5.29e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.62e-13;15!UBERON:0000179;7.62e-13;15!UBERON:0000463;7.62e-13;15!UBERON:0002390;3.39e-08;32 | |||
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| ||
|short_description=p3@RCSD1 | |short_description=p3@RCSD1 | ||
}} | }} |
Latest revision as of 11:30, 18 September 2015
Short description: | p3@RCSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RCSD1_5end |
Coexpression cluster: | C590_CD4_CD14CD16_CD14_CD19_Neutrophils_Whole_blood |
Association with transcript: | 29bp_to_ENST00000461790_5end |
EntrezGene: | RCSD1 |
HGNC: | 28310 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.03e-44 | 98 |
blood island | 7.03e-44 | 98 |
hemolymphoid system | 3.62e-41 | 108 |
immune system | 5.67e-30 | 93 |
bone marrow | 1.62e-29 | 76 |
bone element | 2.22e-25 | 82 |
skeletal element | 8.07e-21 | 90 |
skeletal system | 6.85e-17 | 100 |
adult organism | 4.41e-15 | 114 |
lateral plate mesoderm | 5.88e-13 | 203 |
blood | 7.19e-13 | 15 |
haemolymphatic fluid | 7.19e-13 | 15 |
organism substance | 7.19e-13 | 15 |
connective tissue | 2.46e-10 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.57e-13 | 51 |
immune system cancer | 7.57e-13 | 51 |
leukemia | 4.60e-11 | 39 |
myeloid leukemia | 1.73e-08 | 31 |