FFCP PHASE1:Hg19::chr16:89939979..89940011,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22980 | |EntrezGene=22980 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29181 | |HGNC=29181 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQ70 | |UniProt=Q9BQ70 | ||
|association_with_transcript=0bp_to_NM_014972,uc002fpb.2,uc010vpp.1_5end | |association_with_transcript=0bp_to_NM_014972,uc002fpb.2,uc010vpp.1_5end | ||
|cluster_id=chr16:89939979..89940011,+ | |||
|description=CAGE_peak_2_at_TCF25_5end | |description=CAGE_peak_2_at_TCF25_5end | ||
|id=chr16:89939979..89940011,+ | |id=chr16:89939979..89940011,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.21e-18!42;CL:0000766!2.79e-18!76;CL:0000557!4.74e-16!71;CL:0000860!1.19e-14!45;CL:0002009!8.01e-14!65;CL:0000839!1.57e-13!70;CL:0002194!4.63e-13!63;CL:0000576!4.63e-13!63;CL:0000040!4.63e-13!63;CL:0000559!4.63e-13!63;CL:0002320!1.13e-08!365;CL:0000134!1.74e-07!358;CL:0000048!5.41e-07!430 | |ontology_enrichment_celltype=CL:0002057!2.21e-18!42;CL:0000766!2.79e-18!76;CL:0000557!4.74e-16!71;CL:0000860!1.19e-14!45;CL:0002009!8.01e-14!65;CL:0000839!1.57e-13!70;CL:0002194!4.63e-13!63;CL:0000576!4.63e-13!63;CL:0000040!4.63e-13!63;CL:0000559!4.63e-13!63;CL:0002320!1.13e-08!365;CL:0000134!1.74e-07!358;CL:0000048!5.41e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.16e-17;33!CL:0002057;2.16e-17;33!CL:0000473;5.50e-15;39!CL:0000234;5.50e-15;39!CL:0000576;6.29e-11;48!CL:0000766;7.69e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.59e-21,72;CL:0000557,3.67e-19,67;CL:0000473,8.81e-19,48;CL:0000234,8.81e-19,48;CL:0000860,2.21e-18,42;CL:0002057,2.21e-18,42;CL:0002009,8.26e-17,61;CL:0000839,2.49e-16,66;CL:0002194,5.36e-16,59;CL:0000576,5.36e-16,59;CL:0000040,5.36e-16,59;CL:0000559,5.36e-16,59;CL:0002320,1.24e-09,361;CL:0000134,2.28e-08,354;CL:0000763,6.66e-08,108;CL:0000049,6.66e-08,108;CL:0000048,7.62e-08,427;CL:0000723,5.60e-07,433;CL:0000738,6.01e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;9.45e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.99e-20!115;UBERON:0002371!2.14e-15!80;UBERON:0001474!1.54e-14!86;UBERON:0002204!3.16e-14!167;UBERON:0004765!3.28e-14!101;UBERON:0001434!3.28e-14!101;UBERON:0003081!4.11e-13!216;UBERON:0001049!8.25e-13!57;UBERON:0005068!8.25e-13!57;UBERON:0006241!8.25e-13!57;UBERON:0007135!8.25e-13!57;UBERON:0002390!4.82e-12!102;UBERON:0003061!4.82e-12!102;UBERON:0002616!7.32e-12!59;UBERON:0002193!2.05e-11!112;UBERON:0002405!1.67e-10!115;UBERON:0000955!4.39e-10!69;UBERON:0006238!4.39e-10!69;UBERON:0003075!5.29e-09!86;UBERON:0007284!5.29e-09!86;UBERON:0003080!1.61e-08!42;UBERON:0002780!1.90e-08!41;UBERON:0001890!1.90e-08!41;UBERON:0006240!1.90e-08!41;UBERON:0000062!3.30e-08!511;UBERON:0002384!7.25e-08!375;UBERON:0001017!8.07e-08!82;UBERON:0002346!1.01e-07!90;UBERON:0005743!1.33e-07!86;UBERON:0000467!5.44e-07!625;UBERON:0000480!6.40e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.85e-07;53!UBERON:0002616;4.85e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.26e-19,114;UBERON:0002371,3.43e-18,76;UBERON:0001474,4.17e-17,82;UBERON:0001434,5.73e-17,100;UBERON:0004765,1.20e-16,90;UBERON:0002204,2.02e-16,167;UBERON:0003081,7.44e-16,203;UBERON:0002390,4.41e-14,98;UBERON:0003061,4.41e-14,98;UBERON:0002405,4.74e-14,93;UBERON:0002193,2.83e-13,108;UBERON:0001049,9.63e-13,56;UBERON:0005068,9.63e-13,56;UBERON:0006241,9.63e-13,56;UBERON:0007135,9.63e-13,56;UBERON:0000073,7.37e-12,53;UBERON:0002616,7.37e-12,53;UBERON:0000926,1.16e-10,315;UBERON:0004120,1.16e-10,315;UBERON:0006603,1.16e-10,315;UBERON:0000955,5.37e-10,68;UBERON:0006238,5.37e-10,68;UBERON:0003075,3.70e-09,82;UBERON:0007284,3.70e-09,82;UBERON:0002384,9.15e-09,371;UBERON:0002780,1.90e-08,41;UBERON:0001890,1.90e-08,41;UBERON:0003080,1.90e-08,41;UBERON:0006240,1.90e-08,41;UBERON:0002346,7.89e-08,86;UBERON:0001017,9.92e-08,81;UBERON:0000479,3.27e-07,773 | |||
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|short_description=p2@TCF25 | |short_description=p2@TCF25 | ||
}} | }} |
Latest revision as of 12:50, 18 September 2015
Short description: | p2@TCF25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TCF25_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_014972, uc002fpb.2, uc010vpp.1_5end |
EntrezGene: | TCF25 |
HGNC: | 29181 |
UniProt: | Q9BQ70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.59e-21 | 72 |
granulocyte monocyte progenitor cell | 3.67e-19 | 67 |
defensive cell | 8.81e-19 | 48 |
phagocyte | 8.81e-19 | 48 |
classical monocyte | 2.21e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.21e-18 | 42 |
macrophage dendritic cell progenitor | 8.26e-17 | 61 |
myeloid lineage restricted progenitor cell | 2.49e-16 | 66 |
monopoietic cell | 5.36e-16 | 59 |
monocyte | 5.36e-16 | 59 |
monoblast | 5.36e-16 | 59 |
promonocyte | 5.36e-16 | 59 |
connective tissue cell | 1.24e-09 | 361 |
mesenchymal cell | 2.28e-08 | 354 |
myeloid cell | 6.66e-08 | 108 |
common myeloid progenitor | 6.66e-08 | 108 |
multi fate stem cell | 7.62e-08 | 427 |
somatic stem cell | 5.60e-07 | 433 |
leukocyte | 6.01e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.26e-19 | 114 |
bone marrow | 3.43e-18 | 76 |
bone element | 4.17e-17 | 82 |
skeletal system | 5.73e-17 | 100 |
skeletal element | 1.20e-16 | 90 |
musculoskeletal system | 2.02e-16 | 167 |
lateral plate mesoderm | 7.44e-16 | 203 |
hematopoietic system | 4.41e-14 | 98 |
blood island | 4.41e-14 | 98 |
immune system | 4.74e-14 | 93 |
hemolymphoid system | 2.83e-13 | 108 |
neural tube | 9.63e-13 | 56 |
neural rod | 9.63e-13 | 56 |
future spinal cord | 9.63e-13 | 56 |
neural keel | 9.63e-13 | 56 |
regional part of nervous system | 7.37e-12 | 53 |
regional part of brain | 7.37e-12 | 53 |
mesoderm | 1.16e-10 | 315 |
mesoderm-derived structure | 1.16e-10 | 315 |
presumptive mesoderm | 1.16e-10 | 315 |
brain | 5.37e-10 | 68 |
future brain | 5.37e-10 | 68 |
neural plate | 3.70e-09 | 82 |
presumptive neural plate | 3.70e-09 | 82 |
connective tissue | 9.15e-09 | 371 |
regional part of forebrain | 1.90e-08 | 41 |
forebrain | 1.90e-08 | 41 |
anterior neural tube | 1.90e-08 | 41 |
future forebrain | 1.90e-08 | 41 |
neurectoderm | 7.89e-08 | 86 |
central nervous system | 9.92e-08 | 81 |
tissue | 3.27e-07 | 773 |