FFCP PHASE1:Hg19::chr19:45261992..45262010,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=602 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=998 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=207bp_to_ENST00000473473_5end | |||
|cluster_id=chr19:45261992..45262010,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_9_at_BCL3_5end | |||
|id=chr19:45261992..45262010,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.18e-13!42;CL:0000860!5.78e-13!45;CL:0000766!3.05e-10!76;CL:0000557!2.48e-07!71;CL:0000839!3.89e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.66e-23;33!CL:0002057;2.66e-23;33!CL:0000473;3.04e-16;39!CL:0000234;3.04e-16;39!CL:0000576;1.44e-11;48!CL:0000766;4.57e-10;69!CL:0000094;7.11e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.00e-22,42;CL:0002057,5.00e-22,42;CL:0000766,1.95e-19,72;CL:0000473,6.37e-19,48;CL:0000234,6.37e-19,48;CL:0000738,1.72e-14,136;CL:0000557,2.12e-14,67;CL:0000839,4.86e-14,66;CL:0002194,1.01e-12,59;CL:0000576,1.01e-12,59;CL:0000040,1.01e-12,59;CL:0000559,1.01e-12,59;CL:0002009,1.11e-12,61;CL:0000048,1.87e-12,427;CL:0000723,9.25e-12,433;CL:0000763,2.38e-11,108;CL:0000049,2.38e-11,108;CL:0000034,7.09e-11,441;CL:0002031,1.61e-09,120;CL:0000988,2.46e-09,177;CL:0002320,5.84e-09,361;CL:0002032,8.14e-09,161;CL:0000837,8.14e-09,161;CL:0000037,8.51e-09,168;CL:0002087,9.20e-09,115;CL:0000134,1.69e-08,354;CL:0000094,8.82e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.06e-11!167;UBERON:0000926!1.38e-10!448;UBERON:0004120!1.38e-10!448;UBERON:0006603!1.38e-10!448;UBERON:0003081!8.51e-10!216;UBERON:0002390!2.68e-08!102;UBERON:0003061!2.68e-08!102;UBERON:0002193!7.27e-08!112;UBERON:0002405!4.26e-07!115;UBERON:0002371!5.24e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;9.20e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.67e-16,167;UBERON:0002390,1.39e-14,98;UBERON:0003061,1.39e-14,98;UBERON:0002193,1.55e-14,108;UBERON:0002371,1.60e-13,76;UBERON:0004765,3.90e-12,90;UBERON:0002405,6.00e-12,93;UBERON:0001474,1.42e-11,82;UBERON:0000926,1.70e-11,315;UBERON:0004120,1.70e-11,315;UBERON:0006603,1.70e-11,315;UBERON:0003081,1.92e-11,203;UBERON:0001434,4.10e-11,100;UBERON:0002384,2.71e-08,371;UBERON:0003513,3.58e-07,7 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0.446961094427288,0,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0,0.263766978228454,1.23766352960047,0.994192127183747,0.672325146451775,1.20538905604795,1.46062018077475,0.975865597581014,0.861847406537515,1.22400414746552,1.88072832886853,0.286235987131057,0.821246550437305,0.627713197974014,1.68109492645493,1.39571002064908,0.787107813136792,1.57345710739562,0,1.08371286321253,0,0.90361775633475,0.369754010166788,0.0774672005803016,0.142169232487422,0.293600439334847,1.10799081706375,7.62068900386538,1.73608696572681,0.447830948479849,0,0.515151135268373,5.37973483484389,2.64513160582167,2.66842467306598,8.59987436551033,3.28934310417461,2.78735733805593,11.7953880852082,7.68482119587302,3.07426898855161,1.37898272294647,1.29096936716765,4.06279459783025,11.2945403725563,5.18521685109907,2.69668181334102,8.57034898638527,3.20929027076094,3.83602275479425,6.59702600373432,5.38551875578406,6.39337125799041,9.57690487474327,8.5107783703671,5.60540024096017,7.5374599577023,7.30076085788282,4.77815458351257,0.605399502633369,3.31449872388808,2.21523671208619,0.422510572623884,0,0,0.561643155732475,0.600707571366025,0.964353520182481,0,0,0,0,0,0.889509253863555,0,0,0,0,0,1.70763890732835,2.34894875748376,0.382273228125229,0,0,0,0,1.57204305099666,1.85041349099558,0,0,0,0,0.334231370655521,0.294605907474837,0.664601683750863,1.08321545506006,0.512365278902701,0.520237390239513,0.493313713811028,0.276350017785848,0,0,0,0,0.453237370790265,0,0,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,1.20964045934839,2.40696176205157,0.868946423296794,0,0,0.511450247374121,1.0843174571537,0.50133791063589,2.60723734129483,0,1.94653948121054,0.756278537312543,0.221729397462564,0.702678285545008,0.785874452986276,0,0.370784442784429,0,0.174129737299267,0.531831842075461,0,0,0.371457501329565,0.198762407366705,0,0,0,2.51699661725944,1.10047216776027,0.208994966536811,0,0,0.66944122552934,0.805658634218294,0,0.488124115096339,0.735326160691737,0,0.17859945656816,0,0.450445921933289,0,0.949265659568129,0.183201743930407,5.27121669744253,3.87780264148325,0,0,1.2663051166458,0.794455084879313,0.573673241497627,1.41867352879343,2.24271040056923,0,3.20667812942308,0.622422070799533,0.942974704487816,1.30769522490767,1.21085942115945,0,0.70296429550139,0.624320153660641,0,0.448346041655403,0.469737994575059,0.161872944368132,0.140450806702248,0,0.859840221182376,1.54988671763648,0,1.23633464639278,1.82032272387605,2.15585442544872,0,0.625592599359821,0,0.877955241761676,0.612975591598039,0.901428353439581,0.907457465280168,0.179389635688862,0.213557388818567,0.211931901159562,0,1.33968288009971,0.257640540045629,0.37223371266318,0,0.389748020644795,0,0.460249493211497,2.10139873864455,0,0.302256294682921,0.169560592310488,0.386521706326594,0.272746120590835,0.286804595389004,0.121973706129595,0,0.813357600086629,0.414644220061482,0,0,0,3.85944562915731,0,2.78620756819187,0,0.591534000199219,1.34867752062481,0.964044119533928,0.992645754591546,0.217879444092406,0.949082476444386,0.539325232640658,0.392442930250692,0.38474715694639,2.21446636387394,4.20725321410337,1.2347220339942,0,3.80265104465493,1.96565443335525,2.36315962672562,0,1.35287282397425,0.686271241194102,0.439001141634502,0,0.502644862058154,0.555530670951178,0,2.07986957055916,1.44331342025273,0.34779121492523,0,1.01056513432752,0,1.33177906564219,0,0,0,0.234004265139238,0.891786973732369,0,1.00789276919316,0.708875486211932,0.268675568108545,0.871901815541886,0,0.985326475791887,1.23267807618516,4.14656231081544,5.04419836959365,2.65109110195398,0.253991577168676,0.381988425558278,0,1.71072446022705,0.308482478109971,0,0.285826432630578,0.336393253036082,0.43596006883328,0.1466765716419,0.129271715757778,3.57656445851882,0.845302752556,0.531876233169741,2.08014873822732,0.514414748524284,0,0.266422179016099,0.285955987316295,0.542621605391443,0.823240336780769,0.325736184293735,0.710783897485092,2.37585561880029,0.301439377059586,0.871533458600294,0.699810938274399,0,1.50677127429638,0,0,0,0,0.289562613335158,1.02738161275192,0.537182889719687,0.112085143993527,1.77327684181734,1.50939302401662,1.02674429023799,0.508189248444927,0,0,0,1.91381625495949,36.7013441734119,44.8742188806037,19.4775291314937,1.71768088406796,3.50119364741774,0.813795071099207,0.623912584592421,2.67643483195743,0.630809660135739,0.234282829985426,0,0,2.0694614258501,0,0.184369168541703,0.868836144680828,0.587403472388222,0,0.413536052245775,2.80428461064202,1.921096040462,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0.256278298511402,1.53512174720011,0.482561763430822,0,3.39261326365842,1.59805552781814,0.821271560138091,1.03850885836724,1.85936605535935,0.966875596732978,1.60405176242628,0.920809889358963,1.49258782613989,2.36718518408732,2.22911505431021,0.902399225814824,0.308061348417659,1.56869953835371,1.46139224653261,1.05551628892876,1.13733384070897,0.850468526382578,0.215915916102139,0,0.5418928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| |||
|short_description=p9@BCL3 | |||
}} |
Latest revision as of 14:11, 18 September 2015
Short description: | p9@BCL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_BCL3_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 207bp_to_ENST00000473473_5end |
EntrezGene: | BCL3 |
HGNC: | 998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.00e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.00e-22 | 42 |
myeloid leukocyte | 1.95e-19 | 72 |
defensive cell | 6.37e-19 | 48 |
phagocyte | 6.37e-19 | 48 |
leukocyte | 1.72e-14 | 136 |
granulocyte monocyte progenitor cell | 2.12e-14 | 67 |
myeloid lineage restricted progenitor cell | 4.86e-14 | 66 |
monopoietic cell | 1.01e-12 | 59 |
monocyte | 1.01e-12 | 59 |
monoblast | 1.01e-12 | 59 |
promonocyte | 1.01e-12 | 59 |
macrophage dendritic cell progenitor | 1.11e-12 | 61 |
multi fate stem cell | 1.87e-12 | 427 |
somatic stem cell | 9.25e-12 | 433 |
myeloid cell | 2.38e-11 | 108 |
common myeloid progenitor | 2.38e-11 | 108 |
stem cell | 7.09e-11 | 441 |
hematopoietic lineage restricted progenitor cell | 1.61e-09 | 120 |
hematopoietic cell | 2.46e-09 | 177 |
connective tissue cell | 5.84e-09 | 361 |
hematopoietic oligopotent progenitor cell | 8.14e-09 | 161 |
hematopoietic multipotent progenitor cell | 8.14e-09 | 161 |
hematopoietic stem cell | 8.51e-09 | 168 |
nongranular leukocyte | 9.20e-09 | 115 |
mesenchymal cell | 1.69e-08 | 354 |
granulocyte | 8.82e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.67e-16 | 167 |
hematopoietic system | 1.39e-14 | 98 |
blood island | 1.39e-14 | 98 |
hemolymphoid system | 1.55e-14 | 108 |
bone marrow | 1.60e-13 | 76 |
skeletal element | 3.90e-12 | 90 |
immune system | 6.00e-12 | 93 |
bone element | 1.42e-11 | 82 |
mesoderm | 1.70e-11 | 315 |
mesoderm-derived structure | 1.70e-11 | 315 |
presumptive mesoderm | 1.70e-11 | 315 |
lateral plate mesoderm | 1.92e-11 | 203 |
skeletal system | 4.10e-11 | 100 |
connective tissue | 2.71e-08 | 371 |
trunk blood vessel | 3.58e-07 | 7 |