FFCP PHASE1:Hg19::chr10:61122427..61122441,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:61122427..61122441,- to FFCP PHASE1:Hg19::chr10:61122427..61122441,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=220965 | |EntrezGene=220965 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19371 | |HGNC=19371 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000470220_5end | |||
|cluster_id=chr10:61122427..61122441,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_FAM13C_5end | |||
|id=chr10:61122427..61122441,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.37e-13;82!UBERON:0010122;2.60e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.67e-67!115;UBERON:0001049!2.60e-38!57;UBERON:0005068!2.60e-38!57;UBERON:0006241!2.60e-38!57;UBERON:0007135!2.60e-38!57;UBERON:0005743!2.26e-37!86;UBERON:0001017!4.86e-37!82;UBERON:0000073!3.90e-34!94;UBERON:0001016!3.90e-34!94;UBERON:0000955!1.18e-33!69;UBERON:0006238!1.18e-33!69;UBERON:0002616!4.29e-32!59;UBERON:0003075!8.54e-32!86;UBERON:0007284!8.54e-32!86;UBERON:0002346!7.24e-31!90;UBERON:0003080!7.99e-31!42;UBERON:0002780!6.64e-30!41;UBERON:0001890!6.64e-30!41;UBERON:0006240!6.64e-30!41;UBERON:0000153!1.97e-25!129;UBERON:0007811!1.97e-25!129;UBERON:0002020!2.14e-25!34;UBERON:0003528!2.14e-25!34;UBERON:0001893!2.55e-25!34;UBERON:0003056!7.30e-25!61;UBERON:0002791!2.64e-24!33;UBERON:0000033!9.88e-24!123;UBERON:0001869!3.71e-23!32;UBERON:0004121!1.56e-21!169;UBERON:0000924!2.41e-21!173;UBERON:0006601!2.41e-21!173;UBERON:0002619!5.13e-17!22;UBERON:0000956!1.02e-15!25;UBERON:0000203!1.02e-15!25;UBERON:0001950!5.05e-15!20;UBERON:0000477!2.26e-13!286;UBERON:0000481!3.51e-13!347;UBERON:0004111!9.72e-13!241;UBERON:0000062!5.13e-12!511;UBERON:0002308!7.96e-12!9;UBERON:0000125!7.96e-12!9;UBERON:0000475!1.05e-11!365;UBERON:0000025!1.15e-11!194;UBERON:0000483!6.96e-11!309;UBERON:0000119!1.56e-10!312;UBERON:0002298!2.71e-10!8;UBERON:0000468!1.17e-09!659;UBERON:0009663!1.81e-09!7;UBERON:0002420!4.33e-09!9;UBERON:0007245!4.33e-09!9;UBERON:0010009!4.33e-09!9;UBERON:0010011!4.33e-09!9;UBERON:0000454!4.33e-09!9;UBERON:0000467!7.45e-09!625;UBERON:0000922!8.23e-09!612;UBERON:0000480!8.98e-09!626;UBERON:0003076!1.18e-08!15;UBERON:0003057!1.18e-08!15;UBERON:0000064!3.38e-08!219;UBERON:0002050!8.73e-08!605;UBERON:0005423!8.73e-08!605;UBERON:0000923!1.78e-07!604;UBERON:0005291!1.78e-07!604;UBERON:0006598!1.78e-07!604;UBERON:0002532!1.78e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.95e-46;34!UBERON:0003528;1.20e-45;34!UBERON:0002020;1.20e-45;34!UBERON:0001869;8.19e-44;32!UBERON:0002791;8.24e-44;32!UBERON:0002780;4.67e-38;41!UBERON:0001890;4.67e-38;41!UBERON:0002619;2.08e-36;22!UBERON:0000073;1.67e-33;53!UBERON:0002616;1.67e-33;53!UBERON:0000956;1.07e-31;25!UBERON:0000203;1.07e-31;25!UBERON:0001950;3.75e-31;20!UBERON:0000125;8.85e-28;9!UBERON:0002308;8.85e-28;9!UBERON:0001017;3.03e-24;75!UBERON:0000955;2.97e-23;68!UBERON:0009663;9.13e-22;7!UBERON:0002420;1.09e-21;9!UBERON:0007245;1.09e-21;9!UBERON:0010009;1.09e-21;9!UBERON:0010011;1.09e-21;9!UBERON:0000454;1.09e-21;9!UBERON:0002298;2.32e-19;6!UBERON:0001016;3.56e-17;83!UBERON:0007023;2.60e-14;114!UBERON:0000200;2.05e-13;6!UBERON:0000369;5.90e-13;4!UBERON:0002435;5.90e-13;4!UBERON:0000204;5.90e-13;4!UBERON:0001871;3.55e-11;6!UBERON:0002021;1.08e-10;5!UBERON:0000988;1.53e-10;3!UBERON:0001896;1.53e-10;3!UBERON:0005290;1.53e-10;3!UBERON:0000349;2.23e-10;5!UBERON:0005383;3.84e-10;3!UBERON:0005382;3.84e-10;3!UBERON:0011216;1.10e-09;132!UBERON:0004733;2.49e-09;12!UBERON:0002028;2.49e-09;12!UBERON:0004732;1.47e-08;13!UBERON:0001897;2.95e-08;2!UBERON:0010225;2.95e-08;2!UBERON:0002148;1.02e-07;2!UBERON:0001875;1.02e-07;2!UBERON:0006331;1.02e-07;2!UBERON:0009662;1.02e-07;2!UBERON:0006514;1.02e-07;2!UBERON:0000341;2.60e-07;2!UBERON:0002771;2.60e-07;2!UBERON:0001873;2.60e-07;2!UBERON:0001954;2.60e-07;2!UBERON:0003022;2.60e-07;2!UBERON:0002421;2.60e-07;2!UBERON:0002600;2.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.31e-66,56;UBERON:0005068,7.31e-66,56;UBERON:0006241,7.31e-66,56;UBERON:0007135,7.31e-66,56;UBERON:0000073,1.80e-61,53;UBERON:0002616,1.80e-61,53;UBERON:0003528,4.04e-56,34;UBERON:0002020,4.04e-56,34;UBERON:0001893,6.20e-56,34;UBERON:0000955,2.75e-55,68;UBERON:0006238,2.75e-55,68;UBERON:0007023,5.62e-55,114;UBERON:0001017,3.55e-54,81;UBERON:0002780,8.93e-54,41;UBERON:0001890,8.93e-54,41;UBERON:0003080,8.93e-54,41;UBERON:0006240,8.93e-54,41;UBERON:0001869,1.98e-50,32;UBERON:0002791,2.38e-50,32;UBERON:0001016,7.22e-48,89;UBERON:0003075,5.37e-45,82;UBERON:0007284,5.37e-45,82;UBERON:0002346,1.75e-42,86;UBERON:0003056,8.65e-37,61;UBERON:0002619,1.94e-36,22;UBERON:0010371,1.50e-33,104;UBERON:0010314,2.24e-33,132;UBERON:0000956,1.00e-31,25;UBERON:0000203,1.00e-31,25;UBERON:0001950,2.22e-31,20;UBERON:0000125,3.41e-28,9;UBERON:0002308,3.41e-28,9;UBERON:0011216,3.51e-26,223;UBERON:0004121,8.98e-25,171;UBERON:0000924,8.98e-25,171;UBERON:0006601,8.98e-25,171;UBERON:0009663,4.59e-22,7;UBERON:0002420,7.05e-22,9;UBERON:0007245,7.05e-22,9;UBERON:0010009,7.05e-22,9;UBERON:0010011,7.05e-22,9;UBERON:0000454,7.05e-22,9;UBERON:0000025,7.24e-21,192;UBERON:0002298,2.25e-19,6;UBERON:0004111,9.73e-18,240;UBERON:0000200,6.90e-14,6;UBERON:0000369,2.98e-13,4;UBERON:0002435,2.98e-13,4;UBERON:0000204,2.98e-13,4;UBERON:0010082,2.98e-13,4;UBERON:0003076,3.88e-13,15;UBERON:0003057,3.88e-13,15;UBERON:0000483,2.26e-12,306;UBERON:0000119,3.80e-12,309;UBERON:0001871,2.21e-11,6;UBERON:0000988,9.04e-11,3;UBERON:0002021,1.11e-10,5;UBERON:0000349,2.44e-10,5;UBERON:0001896,2.49e-10,3;UBERON:0005290,2.49e-10,3;UBERON:0010096,2.49e-10,3;UBERON:0005383,4.02e-10,3;UBERON:0005382,4.02e-10,3;UBERON:0004733,2.44e-09,12;UBERON:0002028,2.44e-09,12;UBERON:0007277,2.44e-09,12;UBERON:0000923,6.04e-09,560;UBERON:0010316,6.04e-09,560;UBERON:0005291,6.04e-09,560;UBERON:0006598,6.04e-09,560;UBERON:0010317,6.04e-09,560;UBERON:0002532,6.04e-09,560;UBERON:0002050,8.67e-09,564;UBERON:0004732,1.45e-08,13;UBERON:0000922,2.23e-08,592;UBERON:0001897,3.09e-08,2;UBERON:0010225,3.09e-08,2;UBERON:0005423,3.80e-08,581;UBERON:0001875,5.35e-08,2;UBERON:0006514,5.35e-08,2;UBERON:0002148,7.77e-08,2;UBERON:0006331,7.77e-08,2;UBERON:0009662,7.77e-08,2;UBERON:0002771,8.03e-08,2;UBERON:0001873,1.37e-07,2;UBERON:0010122,1.37e-07,2;UBERON:0000341,3.40e-07,2;UBERON:0001954,4.97e-07,2;UBERON:0003022,4.97e-07,2;UBERON:0002421,4.97e-07,2;UBERON:0002600,4.97e-07,2 | |||
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| ||
|short_description=p4@FAM13C | |||
}} | }} |
Latest revision as of 15:30, 18 September 2015
Short description: | p4@FAM13C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM13C_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 17bp_to_ENST00000470220_5end |
EntrezGene: | FAM13C |
HGNC: | 19371 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data