FFCP PHASE1:Hg19::chr2:85197924..85197955,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56888 | |EntrezGene=56888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20589 | |HGNC=20589 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P0J7 | |UniProt=Q9P0J7 | ||
|association_with_transcript=-260bp_to_ENST00000409785,ENST00000456682_5end | |association_with_transcript=-260bp_to_ENST00000409785,ENST00000456682_5end | ||
|cluster_id=chr2:85197924..85197955,+ | |||
|description=CAGE_peak_3_at_KCMF1_5end | |description=CAGE_peak_3_at_KCMF1_5end | ||
|id=chr2:85197924..85197955,+ | |id=chr2:85197924..85197955,+ | ||
|ontology_enrichment_celltype=CL:0002009!7.63e-15!65;CL:0000557!2.85e-14!71;CL:0002194!7.55e-14!63;CL:0000576!7.55e-14!63;CL:0000040!7.55e-14!63;CL:0000559!7.55e-14!63;CL:0000839!2.21e-11!70;CL:0000766!3.72e-11!76;CL:0002087!7.25e-08!119;CL:0002057!1.17e-07!42;CL:0000860!1.27e-07!45;CL:0002031!3.15e-07!124;CL:0000738!4.11e-07!140 | |ontology_enrichment_celltype=CL:0002009!7.63e-15!65;CL:0000557!2.85e-14!71;CL:0002194!7.55e-14!63;CL:0000576!7.55e-14!63;CL:0000040!7.55e-14!63;CL:0000559!7.55e-14!63;CL:0000839!2.21e-11!70;CL:0000766!3.72e-11!76;CL:0002087!7.25e-08!119;CL:0002057!1.17e-07!42;CL:0000860!1.27e-07!45;CL:0002031!3.15e-07!124;CL:0000738!4.11e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.47e-07;39!CL:0000234;1.47e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.84e-14,61;CL:0000557,6.26e-14,67;CL:0002194,1.84e-13,59;CL:0000576,1.84e-13,59;CL:0000040,1.84e-13,59;CL:0000559,1.84e-13,59;CL:0000839,4.50e-11,66;CL:0000766,8.39e-11,72;CL:0000473,1.86e-10,48;CL:0000234,1.86e-10,48;CL:0000860,1.15e-07,42;CL:0002057,1.15e-07,42;CL:0002087,1.98e-07,115;CL:0002031,7.04e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.36e-15!216;UBERON:0002371!7.52e-12!80;UBERON:0001474!3.48e-10!86;UBERON:0004765!1.65e-09!101;UBERON:0001434!1.65e-09!101;UBERON:0002405!6.25e-08!115;UBERON:0002390!3.15e-07!102;UBERON:0003061!3.15e-07!102;UBERON:0002204!5.32e-07!167;UBERON:0000926!6.33e-07!448;UBERON:0004120!6.33e-07!448;UBERON:0006603!6.33e-07!448;UBERON:0002193!7.60e-07!112 | |ontology_enrichment_uberon=UBERON:0003081!3.36e-15!216;UBERON:0002371!7.52e-12!80;UBERON:0001474!3.48e-10!86;UBERON:0004765!1.65e-09!101;UBERON:0001434!1.65e-09!101;UBERON:0002405!6.25e-08!115;UBERON:0002390!3.15e-07!102;UBERON:0003061!3.15e-07!102;UBERON:0002204!5.32e-07!167;UBERON:0000926!6.33e-07!448;UBERON:0004120!6.33e-07!448;UBERON:0006603!6.33e-07!448;UBERON:0002193!7.60e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.37e-14,203;UBERON:0002371,1.39e-11,76;UBERON:0004765,2.80e-10,90;UBERON:0001474,7.53e-10,82;UBERON:0001434,2.49e-09,100;UBERON:0002405,1.20e-08,93;UBERON:0000926,1.96e-08,315;UBERON:0004120,1.96e-08,315;UBERON:0006603,1.96e-08,315;UBERON:0002390,6.44e-07,98;UBERON:0003061,6.44e-07,98;UBERON:0002204,7.65e-07,167 | |||
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| ||
|short_description=p3@KCMF1 | |short_description=p3@KCMF1 | ||
}} | }} |
Latest revision as of 15:36, 18 September 2015
Short description: | p3@KCMF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCMF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -260bp_to_ENST00000409785, ENST00000456682_5end |
EntrezGene: | KCMF1 |
HGNC: | 20589 |
UniProt: | Q9P0J7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.84e-14 | 61 |
granulocyte monocyte progenitor cell | 6.26e-14 | 67 |
monopoietic cell | 1.84e-13 | 59 |
monocyte | 1.84e-13 | 59 |
monoblast | 1.84e-13 | 59 |
promonocyte | 1.84e-13 | 59 |
myeloid lineage restricted progenitor cell | 4.50e-11 | 66 |
myeloid leukocyte | 8.39e-11 | 72 |
defensive cell | 1.86e-10 | 48 |
phagocyte | 1.86e-10 | 48 |
classical monocyte | 1.15e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.15e-07 | 42 |
nongranular leukocyte | 1.98e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 7.04e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.37e-14 | 203 |
bone marrow | 1.39e-11 | 76 |
skeletal element | 2.80e-10 | 90 |
bone element | 7.53e-10 | 82 |
skeletal system | 2.49e-09 | 100 |
immune system | 1.20e-08 | 93 |
mesoderm | 1.96e-08 | 315 |
mesoderm-derived structure | 1.96e-08 | 315 |
presumptive mesoderm | 1.96e-08 | 315 |
hematopoietic system | 6.44e-07 | 98 |
blood island | 6.44e-07 | 98 |
musculoskeletal system | 7.65e-07 | 167 |