FFCP PHASE1:Hg19::chr1:57431679..57431696,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=732 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1353 | |||
|TSSclassifier=strong | |||
|UniProt=P07358,Q05CV3 | |||
|association_with_transcript=0bp_to_ENST00000371237,NM_000066,uc001cyp.2,uc010oon.1,uc010ooo.1_5end | |||
|cluster_id=chr1:57431679..57431696,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_C8B_5end | |||
|id=chr1:57431679..57431696,- | |||
|ontology_enrichment_celltype=CL:0000181!6.82e-20!12;CL:0000417!6.82e-20!12;CL:0000668!6.82e-20!12;CL:0000414!6.82e-20!12;CL:0000412!6.82e-20!12;CL:0000182!6.82e-20!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.68e-42;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.68e-42,12;CL:0000223,1.49e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.31e-32;11!UBERON:0009497;2.81e-27;13!UBERON:0001041;9.39e-17;30!UBERON:0003104;1.85e-11;31!CL:0000223;8.96e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.94e-22!19;UBERON:0006925!9.94e-22!19;UBERON:0008836!9.94e-22!19;UBERON:0009497!2.17e-20!25;UBERON:0000015!2.17e-20!25;UBERON:0002423!2.17e-20!25;UBERON:0006235!2.17e-20!25;UBERON:0004161!2.17e-20!25;UBERON:0005057!1.32e-19!26;UBERON:0008835!1.32e-18!22;UBERON:0003894!1.32e-18!22;UBERON:0009854!9.56e-18!23;UBERON:0007499!3.13e-16!25;UBERON:0002365!3.50e-16!31;UBERON:0002330!3.50e-16!31;UBERON:0009856!1.46e-15!26;UBERON:0003929!2.08e-15!54;UBERON:0005172!4.41e-15!55;UBERON:0005173!4.41e-15!55;UBERON:0002368!4.03e-14!35;UBERON:0002417!2.26e-13!61;UBERON:0000916!2.26e-13!61;UBERON:0005911!5.54e-13!82;UBERON:0002530!1.27e-11!59;UBERON:0000949!1.18e-10!45;UBERON:0005177!2.64e-09!107;UBERON:0009569!1.15e-08!113;UBERON:0001301!8.51e-08!1;UBERON:0007190!1.11e-07!1;UBERON:0001007!1.40e-07!155;UBERON:0001555!1.40e-07!155;UBERON:0007026!1.40e-07!155;UBERON:0000466!1.56e-07!126;UBERON:0001041!1.63e-07!98;UBERON:0004921!3.24e-07!129;UBERON:0004185!3.24e-07!129;UBERON:0000077!3.38e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.56e-47;19!UBERON:0006925;2.56e-47;19!UBERON:0002423;7.55e-36;25!UBERON:0002365;9.92e-28;31!UBERON:0002330;9.92e-28;31!UBERON:0002368;1.88e-24;33!UBERON:0000949;6.65e-18;43!UBERON:0005172;4.36e-13;52!UBERON:0005173;4.36e-13;52!UBERON:0002417;4.10e-11;58!UBERON:0000916;4.10e-11;58!UBERON:0001007;3.49e-10;81!UBERON:0002530;2.47e-09;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.56e-47,19;UBERON:0006925,2.56e-47,19;UBERON:0008836,2.56e-47,19;UBERON:0008835,8.38e-41,22;UBERON:0003894,8.38e-41,22;UBERON:0009854,5.23e-39,23;UBERON:0007499,7.55e-36,25;UBERON:0009497,7.55e-36,25;UBERON:0000015,7.55e-36,25;UBERON:0002423,7.55e-36,25;UBERON:0006235,7.55e-36,25;UBERON:0004161,7.55e-36,25;UBERON:0009856,1.89e-34,26;UBERON:0002365,8.27e-29,31;UBERON:0002330,8.27e-29,31;UBERON:0002368,1.88e-25,35;UBERON:0003929,1.61e-20,54;UBERON:0005172,1.65e-20,54;UBERON:0005173,1.65e-20,54;UBERON:0000949,1.15e-19,45;UBERON:0002417,2.23e-18,60;UBERON:0000916,2.23e-18,60;UBERON:0005911,2.40e-16,82;UBERON:0001041,2.42e-15,87;UBERON:0002530,7.63e-15,59;UBERON:0004921,2.68e-13,118;UBERON:0005177,4.50e-13,101;UBERON:0009569,1.10e-11,112;UBERON:0001007,1.28e-10,145;UBERON:0001555,1.28e-10,145;UBERON:0007026,1.28e-10,145;UBERON:0004119,1.63e-09,160;UBERON:0000925,1.63e-09,160;UBERON:0006595,1.63e-09,160;UBERON:0001048,7.57e-08,160;UBERON:0011216,1.02e-07,223;UBERON:0003914,4.08e-07,117;UBERON:0000490,6.61e-07,148;UBERON:0005256,8.62e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1156.0059175751,1066.36753009522,1009.65995051852,0,2.7057456479485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,284.187110124418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,291.092632001801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,3.87733098438087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,6.38143776688512,5.93394180344398,7.48179336781452,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,1017.21905395957,111.305786686266,0,0,0,0,0.106787412567695,4.87333345808964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54698931136585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@C8B | |||
}} |
Latest revision as of 16:28, 18 September 2015
Short description: | p1@C8B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C8B_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000371237, NM_000066, uc001cyp.2, uc010oon.1, uc010ooo.1_5end |
EntrezGene: | C8B |
HGNC: | 1353 |
UniProt: | P07358Q05CV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.68e-42 | 12 |
endodermal cell | 1.49e-11 | 58 |