FFCP PHASE1:Hg19::chr6:391743..391759,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:391743..391759,+ to FFCP PHASE1:Hg19::chr6:391743..391759,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3662 | |EntrezGene=3662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6119 | |HGNC=6119 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000412334,ENST00000468485,uc003msz.3,uc003mta.3,uc003mtb.3,uc010jne.1_5end | |||
|cluster_id=chr6:391743..391759,+ | |||
|coexpression_cluster_id=C2859 | |||
|description=CAGE_peak_1_at_IRF4_5end | |||
|id=chr6:391743..391759,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.78e-55!140;CL:0002087!2.28e-48!119;CL:0002031!1.75e-45!124;CL:0000037!1.92e-41!172;CL:0000566!1.92e-41!172;CL:0000988!1.18e-39!182;CL:0002032!1.37e-38!165;CL:0000837!1.37e-38!165;CL:0000542!1.42e-27!53;CL:0000051!1.42e-27!53;CL:0000838!7.86e-27!52;CL:0000766!1.44e-20!76;CL:0000557!1.89e-20!71;CL:0002009!7.48e-20!65;CL:0002057!2.08e-19!42;CL:0002194!1.22e-18!63;CL:0000576!1.22e-18!63;CL:0000040!1.22e-18!63;CL:0000559!1.22e-18!63;CL:0000945!6.83e-18!24;CL:0000826!6.83e-18!24;CL:0000860!1.18e-17!45;CL:0000839!1.56e-17!70;CL:0000763!4.79e-14!112;CL:0000049!4.79e-14!112;CL:0000236!2.42e-11!14;CL:0000451!5.46e-10!10;CL:0000084!3.23e-09!25;CL:0000827!3.23e-09!25;CL:0000791!7.05e-09!18;CL:0000789!7.05e-09!18;CL:0002420!7.05e-09!18;CL:0002419!7.05e-09!18;CL:0000790!7.05e-09!18;CL:0000990!2.36e-08!8;CL:0000134!3.96e-07!358;CL:0000219!9.91e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.29e-21;24!CL:0000542;3.74e-19;53!CL:0000860;5.94e-18;33!CL:0002057;5.94e-18;33!CL:0002087;7.04e-18;104!CL:0000576;4.96e-14;48!CL:0000738;1.56e-13;136!CL:0000473;1.83e-13;39!CL:0000234;1.83e-13;39!CL:0000236;1.94e-12;13!CL:0000451;1.06e-11;10!CL:0000084;3.28e-11;25!CL:0000791;2.38e-10;18!CL:0000789;2.38e-10;18!CL:0002419;2.38e-10;18!CL:0000766;6.07e-10;69!CL:0000990;9.79e-10;8!CL:0000988;3.12e-08;177!CL:0000148;1.02e-07;10!CL:0000840;8.15e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.13e-66,136;CL:0002087,5.87e-58,115;CL:0002031,6.76e-55,120;CL:0000037,1.49e-48,168;CL:0000988,7.20e-48,177;CL:0002032,1.08e-45,161;CL:0000837,1.08e-45,161;CL:0000542,1.77e-33,53;CL:0000051,1.77e-33,53;CL:0000838,1.40e-32,52;CL:0000557,7.07e-24,67;CL:0000766,2.22e-23,72;CL:0000860,4.70e-23,42;CL:0002057,4.70e-23,42;CL:0002009,4.78e-23,61;CL:0002194,1.40e-21,59;CL:0000576,1.40e-21,59;CL:0000040,1.40e-21,59;CL:0000559,1.40e-21,59;CL:0000945,3.16e-21,24;CL:0000826,3.16e-21,24;CL:0000473,7.50e-21,48;CL:0000234,7.50e-21,48;CL:0000839,1.41e-20,66;CL:0000763,7.41e-16,108;CL:0000049,7.41e-16,108;CL:0000236,2.45e-13,14;CL:0000451,1.04e-11,10;CL:0000084,3.13e-11,25;CL:0000827,3.13e-11,25;CL:0000791,2.26e-10,18;CL:0000789,2.26e-10,18;CL:0002420,2.26e-10,18;CL:0002419,2.26e-10,18;CL:0000790,2.26e-10,18;CL:0000990,9.67e-10,8;CL:0000134,1.95e-08,354;CL:0000219,2.61e-08,386;CL:0000148,1.07e-07,10;CL:0000541,1.07e-07,10;CL:0002320,1.24e-07,361;CL:0000840,8.04e-07,5;CL:0001029,8.04e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;3.74e-19;53!CL:0002057;8.96e-17;42!CL:0000790;2.38e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.03e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.88e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.22e-29!102;UBERON:0003061!8.22e-29!102;UBERON:0002193!3.45e-25!112;UBERON:0002371!4.59e-17!80;UBERON:0001474!2.05e-15!86;UBERON:0002405!2.14e-14!115;UBERON:0004765!5.64e-11!101;UBERON:0001434!5.64e-11!101;UBERON:0000178!4.60e-10!15;UBERON:0000179!4.60e-10!15;UBERON:0000463!4.60e-10!15;UBERON:0007023!7.23e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.47e-12;15!UBERON:0000179;8.47e-12;15!UBERON:0000463;8.47e-12;15!UBERON:0002390;2.23e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.63e-34,98;UBERON:0003061,3.63e-34,98;UBERON:0002193,9.68e-31,108;UBERON:0002405,2.44e-21,93;UBERON:0002371,6.22e-20,76;UBERON:0001474,6.88e-18,82;UBERON:0004765,1.45e-14,90;UBERON:0001434,3.07e-12,100;UBERON:0000178,8.50e-12,15;UBERON:0000179,8.50e-12,15;UBERON:0000463,8.50e-12,15;UBERON:0003081,6.51e-10,203;UBERON:0002384,7.01e-07,371 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0,0,0.446961094427288,0,0,0,9.66386824339403,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,395.592201557144,396.792148811588,396.466205477002,20.454942396143,28.4033754591937,46.4448369948228,0,0,0,2.63388481973026,15.4964463411289,0.587200878669695,16.6198622559563,23.0626114590663,13.0206522429511,6.94137970143765,10.3645973126073,4.63636021741536,11.4864608635856,16.6265415223076,12.3717871205786,11.6214518452842,15.6243797448294,16.1047312865454,23.5907761704163,44.5719629360635,28.8508320464074,29.3033828626126,41.9565044329487,29.7938270507552,14.306417805238,16.9201813035864,9.21366286224847,25.7110469591558,44.2882057365009,30.688182038354,29.6866170168045,38.8954132362182,23.8685860298309,10.7377418292576,25.5323351111013,19.3074897188628,26.381109851958,44.3260480657171,26.062661364614,18.7673845816344,36.4594859627689,26.2663781575934,9.29523259772544,5.95292039902122,8.17668717482666,8.64930459828012,10.8127362845885,11.0900654820985,6.55529310604872,9.74691718275542,3.65328307529268,124.957333567539,118.512078643883,122.752277033171,113.936969425257,105.704540577507,119.548507510533,122.954346337984,110.670235526102,121.811575389422,227.848029475924,181.579783359484,14.5388461436928,57.7323819870982,13.695972408304,25.5722701147983,25.1526888159465,19.1209394069544,30.7623151518848,29.9848485302903,31.2475551784924,23.3792074089494,32.3090324967003,38.2987679717288,35.8884909225466,45.7658529762876,21.3912503941878,20.289258219341,32.7231430161316,26.8059517252273,33.037551773796,14.2355100635578,14.7147455449342,15.6803285707465,23.4550339383962,12.6462762888634,14.7759801557531,16.1932602892482,16.565401544853,8.46408490013344,5.70271226669025,13.4011855979218,14.974433505067,14.9916871862815,16.3376303910372,9.85353596305256,14.5156855121807,22.1975362500311,14.4824403882799,2.43806866313962,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.614843499851882,6.22150608614135,0,0,227.183175558278,251.443340660142,135.88303565028,2127.57485942796,1641.05339902819,1732.10632869976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.495845917967,3.87780264148325,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0.468642863667593,0,1.71141546463335,0.448346041655403,0.117434498643765,0,0,0,0.122834317311768,0.619954687054593,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6194201932505,0,0,0,0,0,0,2.92736894711029,1.32529768321485,3.02104251460748,2.48786532036889,3.78481276313443,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,2.53510069643662,7.86261773342101,28.3579155207074,0,0,1.02940686179115,0,0,0.201057944823262,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,2.46217006087397,0.468008530278475,0.297262324577456,0,0,0,0,0,0,1.97065295158377,0,2.48793738648926,2.88239906833923,1.76739406796932,82.5472625798197,130.640041540931,202.786183673381,78.6933251704444,76.7093095566793,98.8128660306488,161.206108003646,0,1.30788020649984,0.1466765716419,0,7.15312891703765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0.144781306667579,0,0.179060963239896,41.3594181336116,32.510075433318,71.3727272785002,25.7969502922294,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,2.07207756718018,0.36807447515742,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,36.804708649874,29.3371313113319,33.619180708085,22.7345678584695,3.32870879020994,0.604780586659361,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,2.7821073144885,0,0,0,0,0,1.54673149267395,0,0.460511024178389,0.137836572484531,0.322260734604821,0.435050081742686,0.511359764496605,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59101623962968,0,0,0,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0,1.13008116620243,0,0,0,0,3.27947376023316,0,3.717881977197,0,0,0,0,0,1.47775344708365,0,0,0,0,0,0,3.85989583184795,0,0,0,0,24.3574852431441,15.2927441428475,23.3555346741407,29.7789719322236,30.0294459352922,27.8843523812868,25.9215089874295,30.9318818754765,0,0,0,200.853232310902,133.593291216188,0,0,0.997896857164083,4.97913962344153,0.635020748171649,0,0,0,0,0,0,0,1.61439765752838,0.425846237690326,0,0.614481528616916,0.447352215784832,0.333698283423817,0,0,0,0,0,0,0,15.0903424650051,0,746.89356142766,0,0.47748896947538,1.18785872333055,0,0,0.140669416410513,0,280.825801682398,0,5.57894367102995,79.5697676729705,0,0,415.288133625648,0,0,0,20.4628948090749,16.6707355526418,28.7379710816328,0,0.969332746095218,0.185536196323703,1.99613798001194,0,0,6.52499617891314,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.658156191461918,0,0,17.3907584218581,0,0,0,0.108647371922008,2.23300811812344,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,13.9336670350991,28.3064206410685,7.33236173920351,485.108566521497,500.928208489123,571.292485744346,0.606610196826093,8.02577647298789,0.234264445725339,102.72204632842,0,0,1.18375320854817,3.629721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| ||
|short_description=p1@IRF4 | |||
}} | }} |
Latest revision as of 16:33, 18 September 2015
Short description: | p1@IRF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IRF4_5end |
Coexpression cluster: | C2859_Dendritic_migratory_myeloma_adult_lymphangiectasia_xeroderma_cord |
Association with transcript: | 0bp_to_ENST00000412334, ENST00000468485, uc003msz.3, uc003mta.3, uc003mtb.3, uc010jne.1_5end |
EntrezGene: | IRF4 |
HGNC: | 6119 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.63e-34 | 98 |
blood island | 3.63e-34 | 98 |
hemolymphoid system | 9.68e-31 | 108 |
immune system | 2.44e-21 | 93 |
bone marrow | 6.22e-20 | 76 |
bone element | 6.88e-18 | 82 |
skeletal element | 1.45e-14 | 90 |
skeletal system | 3.07e-12 | 100 |
blood | 8.50e-12 | 15 |
haemolymphatic fluid | 8.50e-12 | 15 |
organism substance | 8.50e-12 | 15 |
lateral plate mesoderm | 6.51e-10 | 203 |
connective tissue | 7.01e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.88e-07 | 10 |