FFCP PHASE1:Hg19::chr11:62446527..62446572,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51035 | |EntrezGene=51035 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18402 | |HGNC=18402 | ||
|TSSclassifier=strong | |||
|UniProt=Q04323,E9PRQ7,E9PJ81,B4E0P8,Q05BV2 | |UniProt=Q04323,E9PRQ7,E9PJ81,B4E0P8,Q05BV2 | ||
|association_with_transcript=0bp_to_ENST00000294119,ENST00000301935,ENST00000436354,ENST00000524762,ENST00000525717,ENST00000527421,ENST00000528907,ENST00000529640,ENST00000531056,ENST00000531625,ENST00000532904,ENST00000533476,ENST00000533908,ENST00000534176,ENST00000537534,NM_015853,uc001nuj.2,uc001nuk.2,uc001nul.1,uc001num.1,uc010rme.1,uc010rmf.1_5end | |association_with_transcript=0bp_to_ENST00000294119,ENST00000301935,ENST00000436354,ENST00000524762,ENST00000525717,ENST00000527421,ENST00000528907,ENST00000529640,ENST00000531056,ENST00000531625,ENST00000532904,ENST00000533476,ENST00000533908,ENST00000534176,ENST00000537534,NM_015853,uc001nuj.2,uc001nuk.2,uc001nul.1,uc001num.1,uc010rme.1,uc010rmf.1_5end | ||
|cluster_id=chr11:62446527..62446572,- | |||
|coexpression_cluster_id=C884 | |coexpression_cluster_id=C884 | ||
|description=CAGE_peak_1_at_UBXN1_5end | |description=CAGE_peak_1_at_UBXN1_5end | ||
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|ontology_enrichment_celltype=CL:0000738!2.68e-15!140;CL:0002031!7.97e-15!124;CL:0002087!1.13e-14!119;CL:0002057!2.34e-13!42;CL:0000988!5.35e-13!182;CL:0000860!1.65e-12!45;CL:0000003!8.25e-12!722;CL:0000037!7.95e-11!172;CL:0000566!7.95e-11!172;CL:0002032!2.51e-10!165;CL:0000837!2.51e-10!165;CL:0000144!3.44e-10!625;CL:0002371!4.60e-10!591;CL:0000012!1.93e-08!682;CL:0000791!3.31e-08!18;CL:0000789!3.31e-08!18;CL:0002420!3.31e-08!18;CL:0002419!3.31e-08!18;CL:0000790!3.31e-08!18;CL:0000838!3.57e-08!52;CL:0000548!8.53e-08!679;CL:0000004!8.53e-08!679;CL:0000255!8.53e-08!679;CL:0000542!9.47e-08!53;CL:0000051!9.47e-08!53;CL:0002009!9.90e-08!65;CL:0002194!2.30e-07!63;CL:0000576!2.30e-07!63;CL:0000040!2.30e-07!63;CL:0000559!2.30e-07!63;CL:0000839!3.50e-07!70;CL:0000766!7.73e-07!76;CL:0000557!8.37e-07!71;CL:0000236!9.27e-07!14 | |ontology_enrichment_celltype=CL:0000738!2.68e-15!140;CL:0002031!7.97e-15!124;CL:0002087!1.13e-14!119;CL:0002057!2.34e-13!42;CL:0000988!5.35e-13!182;CL:0000860!1.65e-12!45;CL:0000003!8.25e-12!722;CL:0000037!7.95e-11!172;CL:0000566!7.95e-11!172;CL:0002032!2.51e-10!165;CL:0000837!2.51e-10!165;CL:0000144!3.44e-10!625;CL:0002371!4.60e-10!591;CL:0000012!1.93e-08!682;CL:0000791!3.31e-08!18;CL:0000789!3.31e-08!18;CL:0002420!3.31e-08!18;CL:0002419!3.31e-08!18;CL:0000790!3.31e-08!18;CL:0000838!3.57e-08!52;CL:0000548!8.53e-08!679;CL:0000004!8.53e-08!679;CL:0000255!8.53e-08!679;CL:0000542!9.47e-08!53;CL:0000051!9.47e-08!53;CL:0002009!9.90e-08!65;CL:0002194!2.30e-07!63;CL:0000576!2.30e-07!63;CL:0000040!2.30e-07!63;CL:0000559!2.30e-07!63;CL:0000839!3.50e-07!70;CL:0000766!7.73e-07!76;CL:0000557!8.37e-07!71;CL:0000236!9.27e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.85e-09;33!CL:0002057;4.85e-09;33!CL:0000791;3.22e-08;18!CL:0000789;3.22e-08;18!CL:0002419;3.22e-08;18!CL:0000576;4.78e-07;48!CL:0000236;6.18e-07;13 | |ontology_enrichment_celltype_v019=CL:0000860;4.85e-09;33!CL:0002057;4.85e-09;33!CL:0000791;3.22e-08;18!CL:0000789;3.22e-08;18!CL:0002419;3.22e-08;18!CL:0000576;4.78e-07;48!CL:0000236;6.18e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.13e-16,136;CL:0002031,8.03e-16,120;CL:0002087,1.08e-15,115;CL:0000988,1.48e-13,177;CL:0000860,2.34e-13,42;CL:0002057,2.34e-13,42;CL:0000037,1.87e-11,168;CL:0000473,4.95e-11,48;CL:0000234,4.95e-11,48;CL:0002032,5.97e-11,161;CL:0000837,5.97e-11,161;CL:0002009,1.07e-08,61;CL:0002194,2.59e-08,59;CL:0000576,2.59e-08,59;CL:0000040,2.59e-08,59;CL:0000559,2.59e-08,59;CL:0000791,3.31e-08,18;CL:0000789,3.31e-08,18;CL:0002420,3.31e-08,18;CL:0002419,3.31e-08,18;CL:0000790,3.31e-08,18;CL:0000838,3.57e-08,52;CL:0000839,4.84e-08,66;CL:0000542,9.47e-08,53;CL:0000051,9.47e-08,53;CL:0000557,1.29e-07,67;CL:0000766,1.29e-07,72;CL:0000236,9.27e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;7.52e-10;42!CL:0000790;3.22e-08;18 | |ontology_enrichment_development_v019=CL:0002057;7.52e-10;42!CL:0000790;3.22e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.01e-11!216;UBERON:0002193!2.05e-09!112;UBERON:0002390!2.54e-08!102;UBERON:0003061!2.54e-08!102;UBERON:0002371!7.97e-07!80 | |ontology_enrichment_uberon=UBERON:0003081!4.01e-11!216;UBERON:0002193!2.05e-09!112;UBERON:0002390!2.54e-08!102;UBERON:0003061!2.54e-08!102;UBERON:0002371!7.97e-07!80 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.57e-10,108;UBERON:0003081,3.89e-10,203;UBERON:0002390,4.64e-09,98;UBERON:0003061,4.64e-09,98;UBERON:0002405,1.85e-08,93;UBERON:0002371,1.42e-07,76;UBERON:0004765,9.08e-07,90 | |||
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| ||
|short_description=p1@UBXN1 | |short_description=p1@UBXN1 | ||
}} | }} |
Latest revision as of 20:41, 18 September 2015
Short description: | p1@UBXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBXN1_5end |
Coexpression cluster: | C884_Mesenchymal_Alveolar_Smooth_Renal_Pericytes_Fibroblast_Hepatic |
Association with transcript: | 0bp_to_ENST00000294119, ENST00000301935, ENST00000436354, ENST00000524762, ENST00000525717, ENST00000527421, ENST00000528907, ENST00000529640, ENST00000531056, ENST00000531625, ENST00000532904, ENST00000533476, ENST00000533908, ENST00000534176, ENST00000537534, NM_015853, uc001nuj.2, uc001nuk.2, uc001nul.1, uc001num.1, uc010rme.1, uc010rmf.1_5end |
EntrezGene: | UBXN1 |
HGNC: | 18402 |
UniProt: | Q04323E9PRQ7E9PJ81B4E0P8Q05BV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.13e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 8.03e-16 | 120 |
nongranular leukocyte | 1.08e-15 | 115 |
hematopoietic cell | 1.48e-13 | 177 |
classical monocyte | 2.34e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.34e-13 | 42 |
hematopoietic stem cell | 1.87e-11 | 168 |
defensive cell | 4.95e-11 | 48 |
phagocyte | 4.95e-11 | 48 |
hematopoietic oligopotent progenitor cell | 5.97e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.97e-11 | 161 |
macrophage dendritic cell progenitor | 1.07e-08 | 61 |
monopoietic cell | 2.59e-08 | 59 |
monocyte | 2.59e-08 | 59 |
monoblast | 2.59e-08 | 59 |
promonocyte | 2.59e-08 | 59 |
mature alpha-beta T cell | 3.31e-08 | 18 |
alpha-beta T cell | 3.31e-08 | 18 |
immature T cell | 3.31e-08 | 18 |
mature T cell | 3.31e-08 | 18 |
immature alpha-beta T cell | 3.31e-08 | 18 |
lymphoid lineage restricted progenitor cell | 3.57e-08 | 52 |
myeloid lineage restricted progenitor cell | 4.84e-08 | 66 |
lymphocyte | 9.47e-08 | 53 |
common lymphoid progenitor | 9.47e-08 | 53 |
granulocyte monocyte progenitor cell | 1.29e-07 | 67 |
myeloid leukocyte | 1.29e-07 | 72 |
B cell | 9.27e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.57e-10 | 108 |
lateral plate mesoderm | 3.89e-10 | 203 |
hematopoietic system | 4.64e-09 | 98 |
blood island | 4.64e-09 | 98 |
immune system | 1.85e-08 | 93 |
bone marrow | 1.42e-07 | 76 |
skeletal element | 9.08e-07 | 90 |