FFCP PHASE1:Hg19::chr4:79892692..79892714,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100505875 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-187bp_to_ENST00000509088,ENST00000510667,NR_038342,uc003hlr.1_5end | |||
|cluster_id=chr4:79892692..79892714,+ | |||
|coexpression_cluster_id=C162 | |||
|description=CAGE_peak_3_at_LOC100505875_5end | |||
|id=chr4:79892692..79892714,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.41e-16;82!UBERON:0006241;2.66e-10;3!UBERON:0003057;2.66e-10;3!UBERON:0006215;5.05e-09;3!UBERON:0005062;7.15e-07;4!UBERON:0007284;7.15e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.96e-108!115;UBERON:0001049!7.17e-60!57;UBERON:0005068!7.17e-60!57;UBERON:0006241!7.17e-60!57;UBERON:0007135!7.17e-60!57;UBERON:0002616!9.79e-54!59;UBERON:0002346!1.57e-48!90;UBERON:0001017!4.11e-48!82;UBERON:0003075!5.39e-48!86;UBERON:0007284!5.39e-48!86;UBERON:0000955!2.89e-47!69;UBERON:0006238!2.89e-47!69;UBERON:0005743!3.54e-47!86;UBERON:0002780!4.45e-45!41;UBERON:0001890!4.45e-45!41;UBERON:0006240!4.45e-45!41;UBERON:0003080!9.71e-44!42;UBERON:0000073!4.00e-43!94;UBERON:0001016!4.00e-43!94;UBERON:0002020!2.68e-34!34;UBERON:0003528!2.68e-34!34;UBERON:0001893!8.58e-34!34;UBERON:0002791!1.33e-32!33;UBERON:0001869!1.56e-30!32;UBERON:0003056!4.70e-30!61;UBERON:0000153!5.78e-27!129;UBERON:0007811!5.78e-27!129;UBERON:0000033!9.42e-27!123;UBERON:0002619!4.10e-25!22;UBERON:0000924!4.42e-24!173;UBERON:0006601!4.42e-24!173;UBERON:0004121!3.21e-23!169;UBERON:0001950!6.15e-22!20;UBERON:0000956!1.76e-21!25;UBERON:0000203!1.76e-21!25;UBERON:0000025!6.85e-17!194;UBERON:0003076!1.32e-16!15;UBERON:0003057!1.32e-16!15;UBERON:0004111!1.26e-15!241;UBERON:0002308!6.09e-15!9;UBERON:0000125!6.09e-15!9;UBERON:0000477!2.43e-14!286;UBERON:0002420!2.69e-14!9;UBERON:0007245!2.69e-14!9;UBERON:0010009!2.69e-14!9;UBERON:0010011!2.69e-14!9;UBERON:0000454!2.69e-14!9;UBERON:0004732!2.45e-13!13;UBERON:0001894!3.92e-13!7;UBERON:0006222!3.92e-13!7;UBERON:0000062!1.36e-12!511;UBERON:0002298!7.79e-12!8;UBERON:0004733!9.40e-12!12;UBERON:0002028!9.40e-12!12;UBERON:0007277!9.40e-12!12;UBERON:0009663!1.78e-11!7;UBERON:0000064!2.68e-11!219;UBERON:0000475!4.92e-10!365;UBERON:0000483!1.00e-09!309;UBERON:0000119!1.84e-09!312;UBERON:0001871!5.06e-09!7;UBERON:0000349!5.75e-09!5;UBERON:0000468!1.13e-08!659;UBERON:0002021!3.63e-08!5;UBERON:0003296!3.80e-08!4;UBERON:0010133!3.80e-08!4;UBERON:0000481!6.90e-08!347;UBERON:0001872!2.44e-07!5;UBERON:0000467!3.55e-07!625;UBERON:0000480!4.03e-07!626;UBERON:0002680!4.41e-07!9;UBERON:0001895!4.41e-07!9;UBERON:0010092!4.41e-07!9;UBERON:0001896!5.48e-07!3;UBERON:0005290!5.48e-07!3;UBERON:0010096!5.48e-07!3;UBERON:0006331!6.97e-07!3;UBERON:0002240!7.10e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.61e-25;53!UBERON:0002616;1.61e-25;53!UBERON:0007023;9.73e-24;114!UBERON:0002780;2.63e-22;41!UBERON:0001890;2.63e-22;41!UBERON:0004732;1.24e-21;13!UBERON:0001894;1.70e-20;7!UBERON:0004733;5.28e-19;12!UBERON:0002028;5.28e-19;12!UBERON:0002298;1.06e-18;6!UBERON:0001016;1.94e-15;83!UBERON:0000955;7.68e-15;68!UBERON:0001017;2.28e-14;75!UBERON:0003528;6.59e-13;34!UBERON:0002020;6.59e-13;34!UBERON:0002784;9.02e-13;4!UBERON:0001893;1.05e-12;34!UBERON:0002791;1.12e-12;32!UBERON:0003296;2.54e-12;4!UBERON:0010133;2.54e-12;4!UBERON:0000125;6.78e-12;9!UBERON:0002308;6.78e-12;9!UBERON:0002680;2.98e-11;9!UBERON:0001895;2.98e-11;9!UBERON:0002420;5.15e-11;9!UBERON:0007245;5.15e-11;9!UBERON:0010009;5.15e-11;9!UBERON:0010011;5.15e-11;9!UBERON:0000454;5.15e-11;9!UBERON:0001869;1.45e-10;32!UBERON:0001896;1.82e-10;3!UBERON:0005290;1.82e-10;3!UBERON:0002240;2.66e-10;3!UBERON:0005174;2.66e-10;3!UBERON:0001137;2.66e-10;3!UBERON:0000988;5.86e-10;3!UBERON:0002619;1.11e-09;22!UBERON:0000349;3.35e-09;5!UBERON:0003978;4.84e-09;3!UBERON:0000946;4.84e-09;3!UBERON:0000956;2.42e-08;25!UBERON:0000203;2.42e-08;25!UBERON:0002148;1.96e-07;2!UBERON:0006331;1.96e-07;2!UBERON:0009662;1.96e-07;2!UBERON:0001897;2.28e-07;2!UBERON:0010225;2.28e-07;2!UBERON:0005162;2.54e-07;2!UBERON:0000122;2.54e-07;2!UBERON:0009663;3.93e-07;7!UBERON:0001954;4.28e-07;2!UBERON:0003022;4.28e-07;2!UBERON:0002421;4.28e-07;2!UBERON:0002600;4.28e-07;2!UBERON:0001905;4.54e-07;2!UBERON:0002757;4.54e-07;2!UBERON:0010134;4.54e-07;2!UBERON:0005408;4.54e-07;2!UBERON:0001899;4.54e-07;2!UBERON:0000007;6.55e-07;2!UBERON:0002360;6.55e-07;2!UBERON:0000094;6.55e-07;2!UBERON:0010743;6.55e-07;2!UBERON:0001875;6.74e-07;2!UBERON:0006514;6.74e-07;2!UBERON:0002133;7.91e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.39e-77,114;UBERON:0001049,8.02e-51,56;UBERON:0005068,8.02e-51,56;UBERON:0006241,8.02e-51,56;UBERON:0007135,8.02e-51,56;UBERON:0000073,9.25e-44,53;UBERON:0002616,9.25e-44,53;UBERON:0003075,1.12e-43,82;UBERON:0007284,1.12e-43,82;UBERON:0002346,3.61e-41,86;UBERON:0001017,4.63e-41,81;UBERON:0001016,2.31e-38,89;UBERON:0000955,1.93e-36,68;UBERON:0006238,1.93e-36,68;UBERON:0010371,2.92e-32,104;UBERON:0010314,9.05e-28,132;UBERON:0002780,2.83e-27,41;UBERON:0001890,2.83e-27,41;UBERON:0003080,2.83e-27,41;UBERON:0006240,2.83e-27,41;UBERON:0003076,4.36e-27,15;UBERON:0003057,4.36e-27,15;UBERON:0004732,1.14e-21,13;UBERON:0004121,4.20e-21,171;UBERON:0000924,4.20e-21,171;UBERON:0006601,4.20e-21,171;UBERON:0001894,1.52e-20,7;UBERON:0006222,1.52e-20,7;UBERON:0003056,2.75e-20,61;UBERON:0004733,4.82e-19,12;UBERON:0002028,4.82e-19,12;UBERON:0007277,4.82e-19,12;UBERON:0002298,9.71e-19,6;UBERON:0003528,1.02e-16,34;UBERON:0002020,1.02e-16,34;UBERON:0011216,3.54e-16,223;UBERON:0001893,2.31e-14,34;UBERON:0000025,9.63e-14,192;UBERON:0002791,3.41e-13,32;UBERON:0004111,7.51e-13,240;UBERON:0002784,8.27e-13,4;UBERON:0003296,2.30e-12,4;UBERON:0010133,2.30e-12,4;UBERON:0000125,6.86e-12,9;UBERON:0002308,6.86e-12,9;UBERON:0002680,2.78e-11,9;UBERON:0001895,2.78e-11,9;UBERON:0010092,2.78e-11,9;UBERON:0002420,3.65e-11,9;UBERON:0007245,3.65e-11,9;UBERON:0010009,3.65e-11,9;UBERON:0010011,3.65e-11,9;UBERON:0000454,3.65e-11,9;UBERON:0001869,4.09e-11,32;UBERON:0001896,1.80e-10,3;UBERON:0005290,1.80e-10,3;UBERON:0010096,1.80e-10,3;UBERON:0002240,2.75e-10,3;UBERON:0005174,2.75e-10,3;UBERON:0001137,2.75e-10,3;UBERON:0000988,5.46e-10,3;UBERON:0002619,1.02e-09,22;UBERON:0000349,2.09e-09,5;UBERON:0003978,3.46e-09,3;UBERON:0009751,3.46e-09,3;UBERON:0000946,3.46e-09,3;UBERON:0002523,3.46e-09,3;UBERON:0005983,3.46e-09,3;UBERON:0002165,3.46e-09,3;UBERON:0002062,3.46e-09,3;UBERON:0007280,3.46e-09,3;UBERON:0000956,2.25e-08,25;UBERON:0000203,2.25e-08,25;UBERON:0000483,7.96e-08,306;UBERON:0000119,1.19e-07,309;UBERON:0002148,1.93e-07,2;UBERON:0006331,1.93e-07,2;UBERON:0009662,1.93e-07,2;UBERON:0001897,2.32e-07,2;UBERON:0010225,2.32e-07,2;UBERON:0005162,2.54e-07,2;UBERON:0000122,2.54e-07,2;UBERON:0009663,4.00e-07,7;UBERON:0001905,4.10e-07,2;UBERON:0001954,4.10e-07,2;UBERON:0002757,4.10e-07,2;UBERON:0010134,4.10e-07,2;UBERON:0003022,4.10e-07,2;UBERON:0005408,4.10e-07,2;UBERON:0002421,4.10e-07,2;UBERON:0001899,4.10e-07,2;UBERON:0002600,4.10e-07,2;UBERON:0000007,6.56e-07,2;UBERON:0002360,6.95e-07,2;UBERON:0000094,6.95e-07,2;UBERON:0010743,6.95e-07,2;UBERON:0001875,7.15e-07,2;UBERON:0006514,7.15e-07,2;UBERON:0002133,7.36e-07,2 | |||
|phase1_expression=2.18014055124668,1.07050261945492,0.986680828671798,1.0007329835313,2.23480547213644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.908144565869588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20378439891088,0,0,0,0,0,0.979005787313703,3.0882908142977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86079184679834,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,1.9882952955326,1.82870241333667,0,0,0,5.37969568277888,0,0,0,0,0,0,0,0,2.07151151837561,0,0,0.969332746095218,2.78304294485554,0,0,0,0,0,0,0,0,0,0,7.97167247232455,0.60298219312704,3.05163472634166,4.09143261745531,1.77328571372128,4.38770794307945,0,0,4.46311499322023,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,0,0,0,0,8.82954842046869,0,3.27970224015475,0,0,0,0.789168805698781,0,1.53036380815245,4.54943373325113,0,0,0,0,0,0,0,0,0,0,0,3.14508002835654,0,0,0,0,5.23740689037465,0,0.90392296312213,0,0,0.569797163602908,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,5.4037825983881,3.01191833562385,0,0,0,2.51354161145029,1.83328339209347,6.46085722119133,0.199679000498991,0.858452096273142,0.669514372325618,0.403100834920358,0,0,0,0,0,0,0,4.77137813885582,8.03600096058296,0,0,0,0,0,0.303747783290123,0,0.709251365692784,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,13.8332763306859,12.5620971655555,0,0,1.60181118851542,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.854183854313742,0.876336514945499,25.2300046103631,23.7388170288864,19.7466561353599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0,0,0.899209151350433,1.41696576325585,0.957803154342908,2.2562800066483,0.756215088665154,1.31398779682014,1.29180516505481,11.4215536207324,0,0,0,0,0,0,0,1.0529445968896,0,0.781514011233092,0,0,0,0.810451015420736,0.781078098613847,0.206686796501184,1.01465296310251,0.546974809018219,0,1.48863353516788,0,0,4.82131652290458,7.39824188881413,4.24875922965642,4.78090601837725,0.79832133146375,0,0,3.53442611479525,0.920818829879887,0,0,2.11931350696388,0.314231179832004,0,0,0,0,2.57315559035963,0,0,0,0,0,0,0,0,0,0,3.81048345171836,0,0,0,0,0,0,1.29485767437579,0.821302454849976,0,0,0,0,0,0,0,0,0.463044948647668,0,0,4.6578181133242,0,26.8942599947475,19.6050624215877,6.339835913751,0,0.0939839179798536,0,0,0,0,0,0,0,11.8971854015705,0,1.01987235286372,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,5.30450887527676,1.07185652062471,12.4375415918817,10.1364335944657,0.852935927603924,0,0,0.0620747142958579,0,0.381882949668989,0,1.74173398317569,0.342233301085281,0.0673520530145875,1.29099969706817,0,0,0,0,0,0,5.74534787659472,2.84827324821017,1.33151354837103,0.402547587182052,0 | |||
|short_description=p3@LOC100505875 | |||
}} |
Latest revision as of 21:13, 18 September 2015
Short description: | p3@LOC100505875 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100505875_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | -187bp_to_ENST00000509088, ENST00000510667, NR_038342, uc003hlr.1_5end |
EntrezGene: | LOC100505875 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data